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The map label for this gene is ybgI [H]

Identifier: 238893750

GI number: 238893750

Start: 1618792

End: 1619535

Strand: Direct

Name: ybgI [H]

Synonym: KP1_1674

Alternate gene names: 238893750

Gene position: 1618792-1619535 (Clockwise)

Preceding gene: 238893748

Following gene: 238893751

Centisome position: 30.84

GC content: 61.02

Gene sequence:

>744_bases
ATGAAAAATAGCGAACTGGAACAACTGATTAACGACAAGCTCAATAGTGCGGCCATCAGTGACTTCGCCCCTAACGGTCT
GCAGGTGGAAGGACGCGAAACGGTGCACAAGATCGTCACCGGAGTGACGGCCTGCCAGGCGCTGCTGGATGAGGCCGTCC
GTCTGCAGGCGGATGCGGTGATTGTTCATCACGGCTATTTCTGGAAAAACGAATCGCCAGTGATCCGCGGCATGAAGCGC
CGTCGCCTGAAAACCCTGCTGGCCAACGATATCAATCTCTACGGTTGGCACCTGCCGCTGGATGCCCATCCGGAGCTGGG
CAATAACGCGCAGTTGGCGCATCTGCTGGGGATTAACGTGCTCGGCGAAATCGAACCGCTGGTGCCGTGGGGCGAGCTGT
CGATGCCGGTTTCCGGCCTCGAACTGGCCTCGTGGATCGAAGCGCGACTGGGGCGCAAGCCGCTGTGGTGCGGCGATACC
GGGCCGGGCACCGTCAGCCGCGTCGCCTGGTGTACCGGCGGCGGCCAGAGCTTTATCGACGCCGCGGCGCGCTTTGGCGT
GGACGCCTTTATCACCGGCGAAGTGTCGGAACAAACTATTCACTCTGCCCGCGAGCAGGGCCTGCATTTTTATGCCGCCG
GCCACCACGCCACCGAGCGGGGCGGCATTCGCGCCCTCAGCGAATGGCTGACGGAAACGACCGATCTGGATGTTACCTTT
ATTGATATTCCTAACCCTGCCTGA

Upstream 100 bases:

>100_bases
TTAAAAAGTCATGGTCAGTGACGGTAGCGGACTATCGACGACCCGAATGGATATGGTTATGTTATGCCTTTGTATAACCT
GATTATCTGCTGGAGTGGCG

Downstream 100 bases:

>100_bases
CGGGAGAGAAGAAAGTGCAGCGAGCGCGTTGTTATCTGTTAGGTGAAACGGCGGTGGTCCTGGAGCTTGAGCCTCCGGTG
ACCCTGGAGAGCCAAAAACG

Product: putative hydrolase-oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKNSELEQLINDKLNSAAISDFAPNGLQVEGRETVHKIVTGVTACQALLDEAVRLQADAVIVHHGYFWKNESPVIRGMKR
RRLKTLLANDINLYGWHLPLDAHPELGNNAQLAHLLGINVLGEIEPLVPWGELSMPVSGLELASWIEARLGRKPLWCGDT
GPGTVSRVAWCTGGGQSFIDAAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLTETTDLDVTF
IDIPNPA

Sequences:

>Translated_247_residues
MKNSELEQLINDKLNSAAISDFAPNGLQVEGRETVHKIVTGVTACQALLDEAVRLQADAVIVHHGYFWKNESPVIRGMKR
RRLKTLLANDINLYGWHLPLDAHPELGNNAQLAHLLGINVLGEIEPLVPWGELSMPVSGLELASWIEARLGRKPLWCGDT
GPGTVSRVAWCTGGGQSFIDAAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLTETTDLDVTF
IDIPNPA
>Mature_247_residues
MKNSELEQLINDKLNSAAISDFAPNGLQVEGRETVHKIVTGVTACQALLDEAVRLQADAVIVHHGYFWKNESPVIRGMKR
RRLKTLLANDINLYGWHLPLDAHPELGNNAQLAHLLGINVLGEIEPLVPWGELSMPVSGLELASWIEARLGRKPLWCGDT
GPGTVSRVAWCTGGGQSFIDAAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLTETTDLDVTF
IDIPNPA

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=247, Percent_Identity=91.9028340080972, Blast_Score=468, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 26956; Mature: 26956

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSELEQLINDKLNSAAISDFAPNGLQVEGRETVHKIVTGVTACQALLDEAVRLQADAV
CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
IVHHGYFWKNESPVIRGMKRRRLKTLLANDINLYGWHLPLDAHPELGNNAQLAHLLGINV
EEECCEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHCCHH
LGEIEPLVPWGELSMPVSGLELASWIEARLGRKPLWCGDTGPGTVSRVAWCTGGGQSFID
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHEEEEECCCCHHHHH
AAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLTETTDLDVTF
HHHHHCCCEEEECCCHHHHHHHHHHCCCEEEECCCCCCHHCHHHHHHHHHHCCCCCEEEE
IDIPNPA
EECCCCC
>Mature Secondary Structure
MKNSELEQLINDKLNSAAISDFAPNGLQVEGRETVHKIVTGVTACQALLDEAVRLQADAV
CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
IVHHGYFWKNESPVIRGMKRRRLKTLLANDINLYGWHLPLDAHPELGNNAQLAHLLGINV
EEECCEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHCCHH
LGEIEPLVPWGELSMPVSGLELASWIEARLGRKPLWCGDTGPGTVSRVAWCTGGGQSFID
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHEEEEECCCCHHHHH
AAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLTETTDLDVTF
HHHHHCCCEEEECCCHHHHHHHHHHCCCEEEECCCCCCHHCHHHHHHHHHHCCCCCEEEE
IDIPNPA
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]