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The map label for this gene is rbsC [H]

Identifier: 238893624

GI number: 238893624

Start: 1478943

End: 1480010

Strand: Reverse

Name: rbsC [H]

Synonym: KP1_1538

Alternate gene names: 238893624

Gene position: 1480010-1478943 (Counterclockwise)

Preceding gene: 238893625

Following gene: 238893623

Centisome position: 28.2

GC content: 61.99

Gene sequence:

>1068_bases
ATGAACCAGAAATATATGATTTATATGTACCTGCTGAAGGCCCGCACCTTTATCGCCCTCCTGCTGGTGATCGCGTTCTT
CAGCGTGATGGTACCCAACTTCCTGACCGCCTCTAACCTGCTGATCATGACCCAGCACGTGGCGATCACCGGCCTGCTGG
CCATCGGCATGACGCTGGTCATTCTCACCGGCGGCATTGATTTGTCCGTCGGCGCGGTAGCGGGGATCTGCGGCATGGTG
GCGGGCGCGCTGCTGACCAACGGCCTGCCGCTGTGGAACGGCGATATCCTCTTCTTTAATGTCCCGGAGGTGATCCTCTG
CGTGGCGATCTTCGGCGTGCTGGTCGGTCTGGTCAACGGCGCGGTGATCACCCGCTTCGGCGTGGCGCCGTTTATCTGCA
CCTTAGGCATGATGTACGTCGCCCGCGGCTCCGCGCTGCTGTTTAACGACGGGAGCACCTACCCGAATCTCAACGGCATG
GAAGCGCTGGGCAACACCGGTTTCGCCACCCTCGGCTCCGGCACCCTGCTCGGCGTCTATCTGCCGATCTGGCTGATGAT
CGGCTTCCTCGTGCTGGGCTACTGGCTGACCACTAAAACGCCGCTTGGCCGCTACATCTACGCCATCGGCGGCAATGAGT
CTGCCGCCCGCCTCGCCGGCGTGCCGATCGTGAAAGCGAAAATATTCGTCTATGCCTTCTCCGGCCTGTGCGCGGCGTTT
GTCGGCCTGATCGTCGCATCACAGCTGCAAACCGCGCACCCGATGACCGGCAACATGTTTGAGATGGACGCCATCGGCGC
CACCGTGCTCGGCGGTACCGCGCTGGCCGGCGGCCGCGGCCGGGTGACCGGGTCAATTATCGGCGCCTTCGTCATCGTCT
TCCTTGCCGACGGCATGGTGATGATGGGCGTCAGCGACTTCTGGCAGATGGTGATTAAAGGCGTGGTGATTGTCACCGCT
GTGGTCGTCGACCAGTTCCAGCAGAAGCTGCAGAGCAAGGTCATCCTGATGCGCCGCCACGAGGAAAAACTGGCCGCCAT
CCCCCCCAACGGCGCCACCTCCAGCTAA

Upstream 100 bases:

>100_bases
CCGATGGCCGCATTACCGCCGATCTACCGCGTCACGCGGTGACCCGCGAACAGTTAATCGCGGCTTCAACACCTCAAGAT
TAATCAGGCTGGAATCCATC

Downstream 100 bases:

>100_bases
CCGGCAACGATTCACATCTTCCGCCGGGCCTGGTGCCCGGCTCAGCGAAAGGGAAAAAATATGCAACGAGATTTCCAGAA
CAAAACGGTGGTGATCACCG

Product: putative monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNQKYMIYMYLLKARTFIALLLVIAFFSVMVPNFLTASNLLIMTQHVAITGLLAIGMTLVILTGGIDLSVGAVAGICGMV
AGALLTNGLPLWNGDILFFNVPEVILCVAIFGVLVGLVNGAVITRFGVAPFICTLGMMYVARGSALLFNDGSTYPNLNGM
EALGNTGFATLGSGTLLGVYLPIWLMIGFLVLGYWLTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCAAF
VGLIVASQLQTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVTGSIIGAFVIVFLADGMVMMGVSDFWQMVIKGVVIVTA
VVVDQFQQKLQSKVILMRRHEEKLAAIPPNGATSS

Sequences:

>Translated_355_residues
MNQKYMIYMYLLKARTFIALLLVIAFFSVMVPNFLTASNLLIMTQHVAITGLLAIGMTLVILTGGIDLSVGAVAGICGMV
AGALLTNGLPLWNGDILFFNVPEVILCVAIFGVLVGLVNGAVITRFGVAPFICTLGMMYVARGSALLFNDGSTYPNLNGM
EALGNTGFATLGSGTLLGVYLPIWLMIGFLVLGYWLTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCAAF
VGLIVASQLQTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVTGSIIGAFVIVFLADGMVMMGVSDFWQMVIKGVVIVTA
VVVDQFQQKLQSKVILMRRHEEKLAAIPPNGATSS
>Mature_355_residues
MNQKYMIYMYLLKARTFIALLLVIAFFSVMVPNFLTASNLLIMTQHVAITGLLAIGMTLVILTGGIDLSVGAVAGICGMV
AGALLTNGLPLWNGDILFFNVPEVILCVAIFGVLVGLVNGAVITRFGVAPFICTLGMMYVARGSALLFNDGSTYPNLNGM
EALGNTGFATLGSGTLLGVYLPIWLMIGFLVLGYWLTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCAAF
VGLIVASQLQTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVTGSIIGAFVIVFLADGMVMMGVSDFWQMVIKGVVIVTA
VVVDQFQQKLQSKVILMRRHEEKLAAIPPNGATSS

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=334, Percent_Identity=40.1197604790419, Blast_Score=225, Evalue=3e-60,
Organism=Escherichia coli, GI145693152, Length=307, Percent_Identity=34.8534201954397, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1789992, Length=359, Percent_Identity=32.8690807799443, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1788896, Length=326, Percent_Identity=33.1288343558282, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI1790524, Length=329, Percent_Identity=28.8753799392097, Blast_Score=141, Evalue=6e-35,
Organism=Escherichia coli, GI1788471, Length=339, Percent_Identity=33.0383480825959, Blast_Score=121, Evalue=9e-29,
Organism=Escherichia coli, GI145693214, Length=260, Percent_Identity=38.0769230769231, Blast_Score=118, Evalue=7e-28,
Organism=Escherichia coli, GI1787794, Length=334, Percent_Identity=32.6347305389222, Blast_Score=118, Evalue=7e-28,
Organism=Escherichia coli, GI1787793, Length=327, Percent_Identity=31.1926605504587, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87082395, Length=259, Percent_Identity=32.8185328185328, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37440; Mature: 37440

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQKYMIYMYLLKARTFIALLLVIAFFSVMVPNFLTASNLLIMTQHVAITGLLAIGMTLV
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHH
ILTGGIDLSVGAVAGICGMVAGALLTNGLPLWNGDILFFNVPEVILCVAIFGVLVGLVNG
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHCC
AVITRFGVAPFICTLGMMYVARGSALLFNDGSTYPNLNGMEALGNTGFATLGSGTLLGVY
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCCEECCCCHHHHHH
LPIWLMIGFLVLGYWLTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCAAF
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
VGLIVASQLQTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVTGSIIGAFVIVFLADGMV
HHHHHHHHHHHCCCCCCCEEEHHHCCHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCHH
MMGVSDFWQMVIKGVVIVTAVVVDQFQQKLQSKVILMRRHEEKLAAIPPNGATSS
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
>Mature Secondary Structure
MNQKYMIYMYLLKARTFIALLLVIAFFSVMVPNFLTASNLLIMTQHVAITGLLAIGMTLV
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHH
ILTGGIDLSVGAVAGICGMVAGALLTNGLPLWNGDILFFNVPEVILCVAIFGVLVGLVNG
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHCC
AVITRFGVAPFICTLGMMYVARGSALLFNDGSTYPNLNGMEALGNTGFATLGSGTLLGVY
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCCEECCCCHHHHHH
LPIWLMIGFLVLGYWLTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCAAF
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
VGLIVASQLQTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVTGSIIGAFVIVFLADGMV
HHHHHHHHHHHCCCCCCCEEEHHHCCHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCHH
MMGVSDFWQMVIKGVVIVTAVVVDQFQQKLQSKVILMRRHEEKLAAIPPNGATSS
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]