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The map label for this gene is ycjS [C]

Identifier: 238893564

GI number: 238893564

Start: 1413061

End: 1414260

Strand: Direct

Name: ycjS [C]

Synonym: KP1_1472

Alternate gene names: 238893564

Gene position: 1413061-1414260 (Clockwise)

Preceding gene: 238893563

Following gene: 238893566

Centisome position: 26.92

GC content: 64.17

Gene sequence:

>1200_bases
TTGCCGGACGGGCCTTCGATGACTTTGCCGCCGGCGGGAGGGAATAACATGATTCAGGTCGCGATTATCGGGGCAGGGTT
TATTGGCCCGGCGCATCTGGAGGCGCTGCGGCGGCTGGGAGATGTCGAGGTGGTGGCGCTGTGCGACAGCCGCCTTGAGG
CGGCGCAGCGCAAGGCGCGAGCGCTGAACATTGCCCATGCCTACGACAGCGTGGAGGCGCTGCTGGCCCATCCGGGGCTG
CAGGTGGTGCATAACTGTACGCCCAACCATCTACATGCCCAGATTAACCGGCAGATCCTCGCCGCCGGGCTGCACGTCTT
CTCGGAAAAACCGCTGTGTATGACGGCGGAGGAGGCGCGGGAACTGGTGGCGCTTGCCGCCCGGGCCGGCGTGGTGCATG
GCGTCAGCTTCGTCTATCGCCAGTTCGCTATGGTCCAGCAGGCGGCGGCGATGATCCGCCATGGCGAGGTCGGCAGAATC
TTCGCGGCCCACGGCAGCTATCTGCAGGACTGGATGCTGCTGGAGACCGACTACAACTGGCGGGTCGATTCGGCGCAGGG
CGGCGCGTCGCGGACGGTGGCCGACATCGGCTCCCACTGGTGCGATACCGTGCAGTTTATGACCGGTCGGCGGATTGTCG
AGGTGATGGCGGATCTGTCTATCGTCTGGCCAACGCGTAAAGCGCCGGTCAATGGCAAAGCGACCTTCAGCGCCGTTCAC
GAGGCGCAGGCATATGAAACGCGGCCTGTCGATACCGAGGACTTTGGCTCGGTGCTGTTGCGTTTTGACGATGGCAGCAA
GGGCAGCTTTATGGTCTCTCAGGTGAGCGCCGGGCGGAAAAACCGTCTGGCGGTGGAGATTAACGGCAGCCTCTGTTCTC
TGGCCTGGGATCAGGAAGTGCCCCAGCGGCTGTGGATCGGCCACCGCGAGCAGCCGGATCGCCTGCTCAGCGATGACCCG
AGCCTGCTGCGGCCGGAAATCGCTGACAGCGCCCATTACCCCGGCGGCCATATTGAGGGCTGGCCGGACGCTTTTAAGAA
TATGATGGGGCATTTTTATCAGGCGGTGCGCGCCGGGAAGATGCCGGCGGCCGGGGCCCGGCGCTTCGCCGCTTTCGACG
ACGGCGCCGATGTGATGTACATCATCGAGGCGATCGTCAAAAGCCATCAGCAGCAGCGCTGGGTCAGCGTCGAACGCTGA

Upstream 100 bases:

>100_bases
TTTGCCGGCTGGGCGGTGCTGGAGTGGGAGTGCTGCCTGAAGGATAGTGAGACCGGCGCGCGCGAGGGCAGCGAGTTTAT
CCGCCGCCATATCATTCCCG

Downstream 100 bases:

>100_bases
GCGCAGGCGGGGCGCAGGATTATTTCACCCCAAGATAGCCGTCGAGATAGGCACCGGAGAGCTCGTTGCCGAACAGGACG
GCATCTTTATTTTCCATCGC

Product: putative NADH-dependent dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MPDGPSMTLPPAGGNNMIQVAIIGAGFIGPAHLEALRRLGDVEVVALCDSRLEAAQRKARALNIAHAYDSVEALLAHPGL
QVVHNCTPNHLHAQINRQILAAGLHVFSEKPLCMTAEEARELVALAARAGVVHGVSFVYRQFAMVQQAAAMIRHGEVGRI
FAAHGSYLQDWMLLETDYNWRVDSAQGGASRTVADIGSHWCDTVQFMTGRRIVEVMADLSIVWPTRKAPVNGKATFSAVH
EAQAYETRPVDTEDFGSVLLRFDDGSKGSFMVSQVSAGRKNRLAVEINGSLCSLAWDQEVPQRLWIGHREQPDRLLSDDP
SLLRPEIADSAHYPGGHIEGWPDAFKNMMGHFYQAVRAGKMPAAGARRFAAFDDGADVMYIIEAIVKSHQQQRWVSVER

Sequences:

>Translated_399_residues
MPDGPSMTLPPAGGNNMIQVAIIGAGFIGPAHLEALRRLGDVEVVALCDSRLEAAQRKARALNIAHAYDSVEALLAHPGL
QVVHNCTPNHLHAQINRQILAAGLHVFSEKPLCMTAEEARELVALAARAGVVHGVSFVYRQFAMVQQAAAMIRHGEVGRI
FAAHGSYLQDWMLLETDYNWRVDSAQGGASRTVADIGSHWCDTVQFMTGRRIVEVMADLSIVWPTRKAPVNGKATFSAVH
EAQAYETRPVDTEDFGSVLLRFDDGSKGSFMVSQVSAGRKNRLAVEINGSLCSLAWDQEVPQRLWIGHREQPDRLLSDDP
SLLRPEIADSAHYPGGHIEGWPDAFKNMMGHFYQAVRAGKMPAAGARRFAAFDDGADVMYIIEAIVKSHQQQRWVSVER
>Mature_398_residues
PDGPSMTLPPAGGNNMIQVAIIGAGFIGPAHLEALRRLGDVEVVALCDSRLEAAQRKARALNIAHAYDSVEALLAHPGLQ
VVHNCTPNHLHAQINRQILAAGLHVFSEKPLCMTAEEARELVALAARAGVVHGVSFVYRQFAMVQQAAAMIRHGEVGRIF
AAHGSYLQDWMLLETDYNWRVDSAQGGASRTVADIGSHWCDTVQFMTGRRIVEVMADLSIVWPTRKAPVNGKATFSAVHE
AQAYETRPVDTEDFGSVLLRFDDGSKGSFMVSQVSAGRKNRLAVEINGSLCSLAWDQEVPQRLWIGHREQPDRLLSDDPS
LLRPEIADSAHYPGGHIEGWPDAFKNMMGHFYQAVRAGKMPAAGARRFAAFDDGADVMYIIEAIVKSHQQQRWVSVER

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=196, Percent_Identity=33.6734693877551, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI87082405, Length=174, Percent_Identity=24.1379310344828, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 43788; Mature: 43657

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDGPSMTLPPAGGNNMIQVAIIGAGFIGPAHLEALRRLGDVEVVALCDSRLEAAQRKAR
CCCCCCEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHH
ALNIAHAYDSVEALLAHPGLQVVHNCTPNHLHAQINRQILAAGLHVFSEKPLCMTAEEAR
HHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHH
ELVALAARAGVVHGVSFVYRQFAMVQQAAAMIRHGEVGRIFAAHGSYLQDWMLLETDYNW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCEEEEECCCCE
RVDSAQGGASRTVADIGSHWCDTVQFMTGRRIVEVMADLSIVWPTRKAPVNGKATFSAVH
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHH
EAQAYETRPVDTEDFGSVLLRFDDGSKGSFMVSQVSAGRKNRLAVEINGSLCSLAWDQEV
HHHHHCCCCCCHHCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCEEEEECCHHH
PQRLWIGHREQPDRLLSDDPSLLRPEIADSAHYPGGHIEGWPDAFKNMMGHFYQAVRAGK
HHHHHCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
MPAAGARRFAAFDDGADVMYIIEAIVKSHQQQRWVSVER
CCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PDGPSMTLPPAGGNNMIQVAIIGAGFIGPAHLEALRRLGDVEVVALCDSRLEAAQRKAR
CCCCCEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHH
ALNIAHAYDSVEALLAHPGLQVVHNCTPNHLHAQINRQILAAGLHVFSEKPLCMTAEEAR
HHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHH
ELVALAARAGVVHGVSFVYRQFAMVQQAAAMIRHGEVGRIFAAHGSYLQDWMLLETDYNW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCEEEEECCCCE
RVDSAQGGASRTVADIGSHWCDTVQFMTGRRIVEVMADLSIVWPTRKAPVNGKATFSAVH
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHH
EAQAYETRPVDTEDFGSVLLRFDDGSKGSFMVSQVSAGRKNRLAVEINGSLCSLAWDQEV
HHHHHCCCCCCHHCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCEEEEECCHHH
PQRLWIGHREQPDRLLSDDPSLLRPEIADSAHYPGGHIEGWPDAFKNMMGHFYQAVRAGK
HHHHHCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
MPAAGARRFAAFDDGADVMYIIEAIVKSHQQQRWVSVER
CCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]