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The map label for this gene is fecD [C]

Identifier: 238893537

GI number: 238893537

Start: 1383313

End: 1384395

Strand: Reverse

Name: fecD [C]

Synonym: KP1_1440

Alternate gene names: 238893537

Gene position: 1384395-1383313 (Counterclockwise)

Preceding gene: 238893538

Following gene: 238893536

Centisome position: 26.38

GC content: 63.62

Gene sequence:

>1083_bases
ATGCGTTTAACCTCCGACTCCGTGCTCGACGGGCTGCCCGCCGGGACCTCTGGCGTGATGAATGATTATCGCCGTATCGT
GCGTCGCCGTCTGCTGCTGATCCTCCTGCTGGCGCTGTTGATTGTCGCGTCGCTGCTGCTCGATTTTATGCTCGGCCCCT
CCGGTCTGCCGCTGCAGAGCCTGTGGCAGACGTTAACCGATCCGGCCAGCGCCGATCCGGGCACGCGCGCCATCGTCTGG
GATATCCGCCTGCCCTATGCGGTGATGGCGATTATCGTCGGTCTGGCGCTGGGACTGGCCGGCGCCGAAATGCAGACCAT
CCTCAATAACCCGCTGGCCAGCCCGTTTACCCTCGGCGTCTCCTCGGCTGCGGCGTTTGGCGCCGCGCTGGCGATTGTGC
TCGGTATTGGCCTGCCCGGTATTCCCGGCCAGTGGTTTATCTCGGCCAACGCCTTTATCTTCGCCCTGCTGGCGGCCCTG
CTGCTGGACGGCATCACCCGCTGGACCCAGGTGGCCACCTCCGGCGTCATTCTGTTCGGCATCGCGCTGGTCTTTACCTT
TAACGCTCTGGTCTCGATGCTGCAGTTCATCGCCAACGAAGACACGCTGCAGGGGCTGGTGTTCTGGACCATGGGCAGCA
TCGATCGCGCCTCCTGGAGCAAAGTCGCCATCCTGCTGGTCGCCCTGGCGCTGGTGATGCCCCTGTCGCTGCGCAGCGCG
TGGAAGCTGACCGCCCTGCGGTTGGGCGAGGACCGGGCCATCAGCTTTGGCATTAACGTTCGCCGTCTGCGCCTGACCAC
GCTGCTGCGGATCAGCATCCTGTCAGCGCTTTCGGTGGCCTTTGTCGGGCCAATCGGCTTTATCGGCCTGGTGGCGCCGC
ATATTGCGCGGATGCTCTTCGGCGAAGACCATCGCTTTTACCTGCCCGCCAGCGCGCTGATCGGCGCCCTGGTGCTCTCC
CTGGCCTCCATCGCCTCGAAAAACCTGATCCCCGGGGCCATTATTCCGGTGGGGATCGTCACTTCCCTGGTCGGGGTCCC
GTTCTTTTTGAGCATCATTTTACGTCATCGGGGGCAGGTATGA

Upstream 100 bases:

>100_bases
TCTCAACCCCGATGAGACGTACCATTATATCGTGCGCCATTTCACCGACCTGCCGGACCAGCCGTTCGTCTTCTCCTGGC
AGCAGAGCGAGTAATCCGGC

Downstream 100 bases:

>100_bases
GCGACCAGACATTATCCGGGCTGTCGCTGTCTCACTTCAGCGCCGGCTACCCCAGACGCAAGGTGATCGAGAACCTGACG
GTTCCCCATCTGCCGCGAGG

Product: putative FecCD-family membrane transport protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MRLTSDSVLDGLPAGTSGVMNDYRRIVRRRLLLILLLALLIVASLLLDFMLGPSGLPLQSLWQTLTDPASADPGTRAIVW
DIRLPYAVMAIIVGLALGLAGAEMQTILNNPLASPFTLGVSSAAAFGAALAIVLGIGLPGIPGQWFISANAFIFALLAAL
LLDGITRWTQVATSGVILFGIALVFTFNALVSMLQFIANEDTLQGLVFWTMGSIDRASWSKVAILLVALALVMPLSLRSA
WKLTALRLGEDRAISFGINVRRLRLTTLLRISILSALSVAFVGPIGFIGLVAPHIARMLFGEDHRFYLPASALIGALVLS
LASIASKNLIPGAIIPVGIVTSLVGVPFFLSIILRHRGQV

Sequences:

>Translated_360_residues
MRLTSDSVLDGLPAGTSGVMNDYRRIVRRRLLLILLLALLIVASLLLDFMLGPSGLPLQSLWQTLTDPASADPGTRAIVW
DIRLPYAVMAIIVGLALGLAGAEMQTILNNPLASPFTLGVSSAAAFGAALAIVLGIGLPGIPGQWFISANAFIFALLAAL
LLDGITRWTQVATSGVILFGIALVFTFNALVSMLQFIANEDTLQGLVFWTMGSIDRASWSKVAILLVALALVMPLSLRSA
WKLTALRLGEDRAISFGINVRRLRLTTLLRISILSALSVAFVGPIGFIGLVAPHIARMLFGEDHRFYLPASALIGALVLS
LASIASKNLIPGAIIPVGIVTSLVGVPFFLSIILRHRGQV
>Mature_360_residues
MRLTSDSVLDGLPAGTSGVMNDYRRIVRRRLLLILLLALLIVASLLLDFMLGPSGLPLQSLWQTLTDPASADPGTRAIVW
DIRLPYAVMAIIVGLALGLAGAEMQTILNNPLASPFTLGVSSAAAFGAALAIVLGIGLPGIPGQWFISANAFIFALLAAL
LLDGITRWTQVATSGVILFGIALVFTFNALVSMLQFIANEDTLQGLVFWTMGSIDRASWSKVAILLVALALVMPLSLRSA
WKLTALRLGEDRAISFGINVRRLRLTTLLRISILSALSVAFVGPIGFIGLVAPHIARMLFGEDHRFYLPASALIGALVLS
LASIASKNLIPGAIIPVGIVTSLVGVPFFLSIILRHRGQV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=328, Percent_Identity=32.9268292682927, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1786805, Length=311, Percent_Identity=34.7266881028939, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1788004, Length=284, Percent_Identity=34.8591549295775, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1790741, Length=287, Percent_Identity=34.8432055749129, Blast_Score=121, Evalue=6e-29,
Organism=Escherichia coli, GI1786347, Length=277, Percent_Identity=32.4909747292419, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1786804, Length=291, Percent_Identity=32.3024054982818, Blast_Score=91, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 38249; Mature: 38249

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTSDSVLDGLPAGTSGVMNDYRRIVRRRLLLILLLALLIVASLLLDFMLGPSGLPLQS
CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LWQTLTDPASADPGTRAIVWDIRLPYAVMAIIVGLALGLAGAEMQTILNNPLASPFTLGV
HHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHH
SSAAAFGAALAIVLGIGLPGIPGQWFISANAFIFALLAALLLDGITRWTQVATSGVILFG
HHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALVFTFNALVSMLQFIANEDTLQGLVFWTMGSIDRASWSKVAILLVALALVMPLSLRSA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WKLTALRLGEDRAISFGINVRRLRLTTLLRISILSALSVAFVGPIGFIGLVAPHIARMLF
HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEDHRFYLPASALIGALVLSLASIASKNLIPGAIIPVGIVTSLVGVPFFLSIILRHRGQV
CCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLTSDSVLDGLPAGTSGVMNDYRRIVRRRLLLILLLALLIVASLLLDFMLGPSGLPLQS
CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LWQTLTDPASADPGTRAIVWDIRLPYAVMAIIVGLALGLAGAEMQTILNNPLASPFTLGV
HHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHH
SSAAAFGAALAIVLGIGLPGIPGQWFISANAFIFALLAALLLDGITRWTQVATSGVILFG
HHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALVFTFNALVSMLQFIANEDTLQGLVFWTMGSIDRASWSKVAILLVALALVMPLSLRSA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WKLTALRLGEDRAISFGINVRRLRLTTLLRISILSALSVAFVGPIGFIGLVAPHIARMLF
HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEDHRFYLPASALIGALVLSLASIASKNLIPGAIIPVGIVTSLVGVPFFLSIILRHRGQV
CCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]