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The map label for this gene is ylbA [H]

Identifier: 238893476

GI number: 238893476

Start: 1323536

End: 1324318

Strand: Reverse

Name: ylbA [H]

Synonym: KP1_1371

Alternate gene names: 238893476

Gene position: 1324318-1323536 (Counterclockwise)

Preceding gene: 238893477

Following gene: 238893465

Centisome position: 25.23

GC content: 50.83

Gene sequence:

>783_bases
ATGGGTTATTTAAATAATGTGGTTGGCTATCGCGATGATTTACTGGCCAGCCGTTCCATCGTACGCCACGGCAATTATGC
CCTGCTGACGCCGGACGGTCTGGTCAAAAATATTATTCCGGATTTTGCTAACTGTGATGTGACTATTCTGTCGACGCCGA
AATTAGGCGCATCCTTCGTTGATTATCTGGTGACGCTACATGAAAATGGCGGTAATAAAAGCGGGTTTGGCGGCGATGGC
ATTGAGACCTTCCTGTATGTGATTAAGGGGAAAATCACCGCCGGTGCGCAGGGTAAAACCTTTGCGCTGACCGAAGGCGG
CTATCTTTACTGCCCACCGGGTGAACGGATGACTTTCAGTAATAGCCATTCAGCCGACAGCCAGCTATTTCTCTATAAGC
GCCGCTATATTCCGACAGCGGACCATGCGCCTTATCTGGTCACCGGCAACGTCAGCCAGCTGGAGCGTATTCATTATGAA
GGAATGGAAGATGTTGTTCTGATCGACTTCCTGCCAAAAGAGCTGGGCTTCGATATGAATATGCATATCCTCTCTTTCGA
GCCGGGCGCCAGCCACGGCTATATCGAAACCCATGTGCAGGAGCACGGCGCCTATATTCTTTCCGGCCAGGGCGTGTATA
ACCTCGATAACAACTGGGTTCCGGTGAAGAAAGGCGACTATATCTTTATGGGCGCTTATTCCCTACAGGCGGGATACGGC
GTCGGGCGTGAGGCGTTCAGCTATATCTACTCGAAAGATTGCAACCGCGACGTTGAGATCTGA

Upstream 100 bases:

>100_bases
AACCCGGCTGAAAGTACGCATATAGAGGATTTGGCGGAAGGGGTAAAAACGCTCGCCTTAATGTTGCATCAACTGGCCTG
GACTGAATAAGGAATAAAAT

Downstream 100 bases:

>100_bases
TTGCTAACAAACTGCGCTCGTTGGTATTACCCGGCGGCGCTTTGCTTGCGCGGGCCTACGGGGAAATCTCGCCGCTTTCG
TCGGCGGGTGAGGCGTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MGYLNNVVGYRDDLLASRSIVRHGNYALLTPDGLVKNIIPDFANCDVTILSTPKLGASFVDYLVTLHENGGNKSGFGGDG
IETFLYVIKGKITAGAQGKTFALTEGGYLYCPPGERMTFSNSHSADSQLFLYKRRYIPTADHAPYLVTGNVSQLERIHYE
GMEDVVLIDFLPKELGFDMNMHILSFEPGASHGYIETHVQEHGAYILSGQGVYNLDNNWVPVKKGDYIFMGAYSLQAGYG
VGREAFSYIYSKDCNRDVEI

Sequences:

>Translated_260_residues
MGYLNNVVGYRDDLLASRSIVRHGNYALLTPDGLVKNIIPDFANCDVTILSTPKLGASFVDYLVTLHENGGNKSGFGGDG
IETFLYVIKGKITAGAQGKTFALTEGGYLYCPPGERMTFSNSHSADSQLFLYKRRYIPTADHAPYLVTGNVSQLERIHYE
GMEDVVLIDFLPKELGFDMNMHILSFEPGASHGYIETHVQEHGAYILSGQGVYNLDNNWVPVKKGDYIFMGAYSLQAGYG
VGREAFSYIYSKDCNRDVEI
>Mature_259_residues
GYLNNVVGYRDDLLASRSIVRHGNYALLTPDGLVKNIIPDFANCDVTILSTPKLGASFVDYLVTLHENGGNKSGFGGDGI
ETFLYVIKGKITAGAQGKTFALTEGGYLYCPPGERMTFSNSHSADSQLFLYKRRYIPTADHAPYLVTGNVSQLERIHYEG
MEDVVLIDFLPKELGFDMNMHILSFEPGASHGYIETHVQEHGAYILSGQGVYNLDNNWVPVKKGDYIFMGAYSLQAGYGV
GREAFSYIYSKDCNRDVEI

Specific function: Unknown

COG id: COG3257

COG function: function code R; Uncharacterized protein, possibly involved in glyoxylate utilization

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786725, Length=261, Percent_Identity=84.2911877394636, Blast_Score=441, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017627
- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR008579
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF05899 Cupin_3 [H]

EC number: NA

Molecular weight: Translated: 28770; Mature: 28639

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYLNNVVGYRDDLLASRSIVRHGNYALLTPDGLVKNIIPDFANCDVTILSTPKLGASFV
CCCHHHHCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCHHCCCEEEEECCCCCHHHH
DYLVTLHENGGNKSGFGGDGIETFLYVIKGKITAGAQGKTFALTEGGYLYCPPGERMTFS
HEEEEEECCCCCCCCCCCCHHHHEEHHEECCEEECCCCCEEEEECCCEEECCCCCCEEEC
NSHSADSQLFLYKRRYIPTADHAPYLVTGNVSQLERIHYEGMEDVVLIDFLPKELGFDMN
CCCCCCCEEEEEEECCCCCCCCCCEEEECCHHHHHHHHHCCCCCEEEEEEEHHHHCCCCC
MHILSFEPGASHGYIETHVQEHGAYILSGQGVYNLDNNWVPVKKGDYIFMGAYSLQAGYG
EEEEEECCCCCCCEEEEEEHHCCCEEEECCEEEECCCCEEECCCCCEEEEEEEEECCCCC
VGREAFSYIYSKDCNRDVEI
CCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GYLNNVVGYRDDLLASRSIVRHGNYALLTPDGLVKNIIPDFANCDVTILSTPKLGASFV
CCHHHHCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCHHCCCEEEEECCCCCHHHH
DYLVTLHENGGNKSGFGGDGIETFLYVIKGKITAGAQGKTFALTEGGYLYCPPGERMTFS
HEEEEEECCCCCCCCCCCCHHHHEEHHEECCEEECCCCCEEEEECCCEEECCCCCCEEEC
NSHSADSQLFLYKRRYIPTADHAPYLVTGNVSQLERIHYEGMEDVVLIDFLPKELGFDMN
CCCCCCCEEEEEEECCCCCCCCCCEEEECCHHHHHHHHHCCCCCEEEEEEEHHHHCCCCC
MHILSFEPGASHGYIETHVQEHGAYILSGQGVYNLDNNWVPVKKGDYIFMGAYSLQAGYG
EEEEEECCCCCCCEEEEEEHHCCCEEEECCEEEECCCCEEECCCCCEEEEEEEEECCCCC
VGREAFSYIYSKDCNRDVEI
CCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]