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The map label for this gene is tsx [H]

Identifier: 238893348

GI number: 238893348

Start: 1189201

End: 1190085

Strand: Reverse

Name: tsx [H]

Synonym: KP1_1229

Alternate gene names: 238893348

Gene position: 1190085-1189201 (Counterclockwise)

Preceding gene: 238893349

Following gene: 238893339

Centisome position: 22.67

GC content: 54.8

Gene sequence:

>885_bases
ATGAAAAAAACATTACTGGCAGCGGGTGCGGTTGTGGCGCTCTCCACTACTTTTGCCGCCGGCGCGGCAGAAAACGACAA
ACCGCAGTATCTGTCTGACTGGTGGCACCAGAGTGTTAACGTGGTGGGCAGCTACCACACCCGTTTTGGACCGCAGATCC
GTAACGATACCTACCTGGAATACGAAGCGTTCGCCAAAAAAGACTGGTTTGATTTCTACGGCTATATCGATGCCCCGGTA
TTCTTCGGCGGCAACAGCACGGCAAAAGGTATCTGGAACAAAGGTTCCCCGCTGTTTATGGAGATCGAACCGCGTTTCTC
TATCGATAAGCTGACCAATACCGACCTGAGCTTCGGGCCGTTCAAAGAATGGTATTTCGCCAACAACTATATCTACGATA
TGGGCCGCAACGACTCCCAGGAGCAGAGCACCTGGTATATGGGTCTGGGTACCGATATCGATACCGGCCTGCCAATGAGC
CTGTCGCTGAACGTCTACGCCAAGTACCAGTGGCAGAACTACGGCGCGTCCAACGAAAACGAATGGGACGGCTATCGCTT
CAAAGTGAAATACTTTGTGCCGCTGACCGACCTGTGGGGCGGTTCGCTGAGCTACATCGGCTTCACCAACTTCGACTGGG
GTTCTGACCTCGGCGATGACAACTTCTACGATCTGAACGGGAAGCACGCGCGCACCAGCAACTCTATCGCCTCCAGCCAC
ATCCTGGCGCTGAACTACGCGCACTGGCACTACTCTATCGTCGCCCGTTACTTCCATAACGGCGGCCAGTGGGCTGATGA
TGCGAAGCTGAACTTCGGCGATGTTCCGTTCAGCGTTCGCTCGACCGGCTGGGGTGGTTACTTCGTGGTCGGCTACAACT
TCTGA

Upstream 100 bases:

>100_bases
ATGATTCCTATAATAGACCCCCACAGAAAGACGAAATATTTAGAAACGCTTCGGCACTTCTTTTAACGCCTTCAGGCTCA
ATTTAAACAGTGGCATTACT

Downstream 100 bases:

>100_bases
TTGCTGATACAGCAAGACAGCGCCCGGGCCGCAGCTCCTGCTGCCCGGGCTTTTTTATTTCTCCCGCACCTCGCACCGGA
CCTTGCGCAGAAAATCGCTT

Product: nucleoside channel phage T6/colicin K receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKKTLLAAGAVVALSTTFAAGAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYIDAPV
FFGGNSTAKGIWNKGSPLFMEIEPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNDSQEQSTWYMGLGTDIDTGLPMS
LSLNVYAKYQWQNYGASNENEWDGYRFKVKYFVPLTDLWGGSLSYIGFTNFDWGSDLGDDNFYDLNGKHARTSNSIASSH
ILALNYAHWHYSIVARYFHNGGQWADDAKLNFGDVPFSVRSTGWGGYFVVGYNF

Sequences:

>Translated_294_residues
MKKTLLAAGAVVALSTTFAAGAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYIDAPV
FFGGNSTAKGIWNKGSPLFMEIEPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNDSQEQSTWYMGLGTDIDTGLPMS
LSLNVYAKYQWQNYGASNENEWDGYRFKVKYFVPLTDLWGGSLSYIGFTNFDWGSDLGDDNFYDLNGKHARTSNSIASSH
ILALNYAHWHYSIVARYFHNGGQWADDAKLNFGDVPFSVRSTGWGGYFVVGYNF
>Mature_294_residues
MKKTLLAAGAVVALSTTFAAGAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYIDAPV
FFGGNSTAKGIWNKGSPLFMEIEPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNDSQEQSTWYMGLGTDIDTGLPMS
LSLNVYAKYQWQNYGASNENEWDGYRFKVKYFVPLTDLWGGSLSYIGFTNFDWGSDLGDDNFYDLNGKHARTSNSIASSH
ILALNYAHWHYSIVARYFHNGGQWADDAKLNFGDVPFSVRSTGWGGYFVVGYNF

Specific function: Constitutes the receptor for colicin K and phage T6, and functions as substrate-specific channel for nucleosides and deoxynucleosides [H]

COG id: COG3248

COG function: function code M; Nucleoside-binding outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786612, Length=294, Percent_Identity=87.0748299319728, Blast_Score=510, Evalue=1e-146,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003055
- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 33549; Mature: 33549

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLAAGAVVALSTTFAAGAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQIRNDTYLE
CCCCEEECCEEEEEEEHHCCCCCCCCCCCHHHHHHHHHHEEEEEEHHHCCCCCCCCEEEE
YEAFAKKDWFDFYGYIDAPVFFGGNSTAKGIWNKGSPLFMEIEPRFSIDKLTNTDLSFGP
EHHHCCCCCHHCCEEECCEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCCCCC
FKEWYFANNYIYDMGRNDSQEQSTWYMGLGTDIDTGLPMSLSLNVYAKYQWQNYGASNEN
CHHEEEECCEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCC
EWDGYRFKVKYFVPLTDLWGGSLSYIGFTNFDWGSDLGDDNFYDLNGKHARTSNSIASSH
CCCCEEEEEEEEEEEHHCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCE
ILALNYAHWHYSIVARYFHNGGQWADDAKLNFGDVPFSVRSTGWGGYFVVGYNF
EEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECC
>Mature Secondary Structure
MKKTLLAAGAVVALSTTFAAGAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQIRNDTYLE
CCCCEEECCEEEEEEEHHCCCCCCCCCCCHHHHHHHHHHEEEEEEHHHCCCCCCCCEEEE
YEAFAKKDWFDFYGYIDAPVFFGGNSTAKGIWNKGSPLFMEIEPRFSIDKLTNTDLSFGP
EHHHCCCCCHHCCEEECCEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCCCCC
FKEWYFANNYIYDMGRNDSQEQSTWYMGLGTDIDTGLPMSLSLNVYAKYQWQNYGASNEN
CHHEEEECCEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCC
EWDGYRFKVKYFVPLTDLWGGSLSYIGFTNFDWGSDLGDDNFYDLNGKHARTSNSIASSH
CCCCEEEEEEEEEEEHHCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCE
ILALNYAHWHYSIVARYFHNGGQWADDAKLNFGDVPFSVRSTGWGGYFVVGYNF
EEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9043137 [H]