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The map label for this gene is rdgC [H]

Identifier: 238893319

GI number: 238893319

Start: 1158262

End: 1159173

Strand: Reverse

Name: rdgC [H]

Synonym: KP1_1196

Alternate gene names: 238893319

Gene position: 1159173-1158262 (Counterclockwise)

Preceding gene: 238893321

Following gene: 238893314

Centisome position: 22.09

GC content: 58.0

Gene sequence:

>912_bases
ATGCTGTGGTTCAAAAATTTAATGGTTTACCGTCTCAGCCGCGATATCGAATTGCGCGCCGAGGAGATGGAAAAACAGCT
GGCCGAGCTGACATTTACCCCTTGTGGCAGCCAGGATATGGCGAAAACCGGTTGGGTGTCGCCGATGGGATCGCACAGCG
ACGCGCTGACGCATACGGCAAACGGCCAGATCATTATCTGCGCGCGTAAAGAAGAGAAGATCCTGCCGTCGCCGGTGATT
AAGCAGGCGCTGGAGGCAAAGATCCAGAAGCTGGAAGCCGATCAGGGCCGCAAGCTGAAGAAGACCGAGAAAGATTCCCT
GAAAGATGAAGTGCTGCACTCGCTACTGCCGCGCGCCTTCAGCCGCTTCAGCCAGACAATGATGTGGATCGACACCGTCA
ACGGCCTGATCATGGTCGACTGCGCCAGCGCGAAGAAAGCGGAAGATACTCTGGCCCTGCTGCGTAAAACCCTCGGCTCG
CTGCCGGTGGTGCCGCTGACCCTGGAGAATCCGATTGAGCTAACGCTGACCGAGTGGGTCCGCTCCGGCACCGTGGCGCA
GGGCTTCCAGCTGCTGGACGAAGCCGAGCTGAAAGCGATGCTGGAAGATGGCGGCGTGATCCGCGCCAAGAAGCAGGATC
TGGTTAGCGACGAAATCGCTGTACACATTGAGGCCGGGAAGGTCGTCACCAAGCTGGCGCTGGACTGGCAGCAGCGTATT
CAGTTTGTGATCTGCGACGACGCGTCAATTAAGCGCCTCAAGTTCTGCGATGAACTGCGCGACCAAAACGAAGATATCGA
TCGGGAAGATTTCGCCCAGCGCTTTGACGCCGACTTTATCTTAATGACCGGCGAGCTGGCTGCCCTGATCCAAAGCCTGG
TGGAAGGGCTCGGCGGCGAAGCGCAGCGCTAA

Upstream 100 bases:

>100_bases
AATACGCACGCTCAGCTCCTCACCCCGATTAACAATGCAAGCATAGCGACAATTCGCTATCATGCCCGCCTGATTTAACG
ACAAAGCCGTGGAAATTATC

Downstream 100 bases:

>100_bases
GCGCCGCTTTCCTTCCTGCCGGGCAGGAAGGAAAAAACAACCCGGCGGCAGGCGCCGGGCGTCACGCTGGCTTACAGATA
GCGGCACAGATAAGAGGTTG

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MLWFKNLMVYRLSRDIELRAEEMEKQLAELTFTPCGSQDMAKTGWVSPMGSHSDALTHTANGQIIICARKEEKILPSPVI
KQALEAKIQKLEADQGRKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKTLGS
LPVVPLTLENPIELTLTEWVRSGTVAQGFQLLDEAELKAMLEDGGVIRAKKQDLVSDEIAVHIEAGKVVTKLALDWQQRI
QFVICDDASIKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQSLVEGLGGEAQR

Sequences:

>Translated_303_residues
MLWFKNLMVYRLSRDIELRAEEMEKQLAELTFTPCGSQDMAKTGWVSPMGSHSDALTHTANGQIIICARKEEKILPSPVI
KQALEAKIQKLEADQGRKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKTLGS
LPVVPLTLENPIELTLTEWVRSGTVAQGFQLLDEAELKAMLEDGGVIRAKKQDLVSDEIAVHIEAGKVVTKLALDWQQRI
QFVICDDASIKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQSLVEGLGGEAQR
>Mature_303_residues
MLWFKNLMVYRLSRDIELRAEEMEKQLAELTFTPCGSQDMAKTGWVSPMGSHSDALTHTANGQIIICARKEEKILPSPVI
KQALEAKIQKLEADQGRKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKTLGS
LPVVPLTLENPIELTLTEWVRSGTVAQGFQLLDEAELKAMLEDGGVIRAKKQDLVSDEIAVHIEAGKVVTKLALDWQQRI
QFVICDDASIKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQSLVEGLGGEAQR

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=303, Percent_Identity=90.7590759075908, Blast_Score=573, Evalue=1e-165,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 34029; Mature: 34029

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWFKNLMVYRLSRDIELRAEEMEKQLAELTFTPCGSQDMAKTGWVSPMGSHSDALTHTA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHEEEC
NGQIIICARKEEKILPSPVIKQALEAKIQKLEADQGRKLKKTEKDSLKDEVLHSLLPRAF
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
SRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKTLGSLPVVPLTLENPIELTLTEWV
HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
RSGTVAQGFQLLDEAELKAMLEDGGVIRAKKQDLVSDEIAVHIEAGKVVTKLALDWQQRI
HCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCEEEEEECCHHHHHHHHHHHHCC
QFVICDDASIKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQSLVEGLGGE
EEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCC
AQR
CCC
>Mature Secondary Structure
MLWFKNLMVYRLSRDIELRAEEMEKQLAELTFTPCGSQDMAKTGWVSPMGSHSDALTHTA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHEEEC
NGQIIICARKEEKILPSPVIKQALEAKIQKLEADQGRKLKKTEKDSLKDEVLHSLLPRAF
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
SRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKTLGSLPVVPLTLENPIELTLTEWV
HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
RSGTVAQGFQLLDEAELKAMLEDGGVIRAKKQDLVSDEIAVHIEAGKVVTKLALDWQQRI
HCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCEEEEEECCHHHHHHHHHHHHCC
QFVICDDASIKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQSLVEGLGGE
EEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCC
AQR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA