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The map label for this gene is xdhC

Identifier: 238893236

GI number: 238893236

Start: 1079364

End: 1079621

Strand: Direct

Name: xdhC

Synonym: KP1_1105

Alternate gene names: NA

Gene position: 1079364-1079621 (Clockwise)

Preceding gene: 238893229

Following gene: 238893237

Centisome position: 20.57

GC content: 55.43

Gene sequence:

>258_bases
ATGAATTTATCCCGTCAGGAACAACGGACCTTACACGTTCTCGCCAAAGGTGGCCGTATTGCGCACGTCCGCGATACCTC
CGGCCGCATTACCGCCGTTGAATGCTACACCCGCGAAGGGCTGTTGCTGAGCGACTGCACCCTTGCGGTCTTCAAAAAGC
TCAAAACCAAAAAGCTGATTAAGTCGGTGAACGGCCAGCCGTACCGGATCAACACGACCGGTTTGAATAACGTTCGCGCG
CAAGCGGACAACCGCTGA

Upstream 100 bases:

>100_bases
GACCTGCCCAGGCCGGACTGATTATCGCTGCGCTTAAACCTTACGCACACACCTGCGGGTGTAGGCATGTTTTCGCACAT
GATAATGAACAGGTTTCAGT

Downstream 100 bases:

>100_bases
AATAGCGACCCGGGCAGGGTCGCTGCCCGGGCGTATGGCTCTCAAGGAGAAAACCTCATGATCGATATCCCTCGCATTTT
TACCATCAGTGAAAGCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MNLSRQEQRTLHVLAKGGRIAHVRDTSGRITAVECYTREGLLLSDCTLAVFKKLKTKKLIKSVNGQPYRINTTGLNNVRA
QADNR

Sequences:

>Translated_85_residues
MNLSRQEQRTLHVLAKGGRIAHVRDTSGRITAVECYTREGLLLSDCTLAVFKKLKTKKLIKSVNGQPYRINTTGLNNVRA
QADNR
>Mature_85_residues
MNLSRQEQRTLHVLAKGGRIAHVRDTSGRITAVECYTREGLLLSDCTLAVFKKLKTKKLIKSVNGQPYRINTTGLNNVRA
QADNR

Specific function: Unknown

COG id: COG3811

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0386 family

Homologues:

Organism=Escherichia coli, GI87082418, Length=85, Percent_Identity=88.2352941176471, Blast_Score=135, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y251_KLEP7 (A6T541)

Other databases:

- EMBL:   CP000647
- RefSeq:   YP_001333942.1
- STRING:   A6T541
- GeneID:   5339793
- GenomeReviews:   CP000647_GR
- KEGG:   kpn:KPN_00259
- eggNOG:   COG3811
- HOGENOM:   HBG299141
- OMA:   PYRITER
- ProtClustDB:   PRK13687
- HAMAP:   MF_00827
- InterPro:   IPR018654

Pfam domain/function: PF09857 DUF2084

EC number: NA

Molecular weight: Translated: 9538; Mature: 9538

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSRQEQRTLHVLAKGGRIAHVRDTSGRITAVECYTREGLLLSDCTLAVFKKLKTKKLI
CCCCHHHHHHEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHH
KSVNGQPYRINTTGLNNVRAQADNR
HHCCCCCEEEECCCCCCEECCCCCC
>Mature Secondary Structure
MNLSRQEQRTLHVLAKGGRIAHVRDTSGRITAVECYTREGLLLSDCTLAVFKKLKTKKLI
CCCCHHHHHHEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHH
KSVNGQPYRINTTGLNNVRAQADNR
HHCCCCCEEEECCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA