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The map label for this gene is yaeJ [H]

Identifier: 238893188

GI number: 238893188

Start: 1027260

End: 1027673

Strand: Direct

Name: yaeJ [H]

Synonym: KP1_1050

Alternate gene names: 238893188

Gene position: 1027260-1027673 (Clockwise)

Preceding gene: 238893187

Following gene: 238893189

Centisome position: 19.57

GC content: 56.52

Gene sequence:

>414_bases
ATGATTACTATTAGCCGCAGCGTAGCCCTCGCCGACGACGAGATCGTCTTGTCAGGCATTCGCGCCCAGGGAGCAGGGGG
GCAGCATGTGAACAAAGCGTCGACGGCGATCCATCTGCGCTTTGATATTAAAGCTTCAAGCCTGCCGGAGTTTTACAAAG
AGCGCCTGCTCGCCGCCAGCCACCACTTAATTTCTGCTGACGGTGTGGTTATCATTAAGGCTCAGGAATACCGCAGCCAG
GAGATGAACCGTGAAGCGGCGATCGCCCGGCTGGTGGCCCTTATTAAAGAATTAACCGCAGTGCAAAAAAGTCGCCGGGA
GACGCGACCGACTCGGGCATCGAAAGAGCGACGCCTTGCTTCCAAGGCACAGAAGTCCTCAGTCAAGGCGCTGCGTGGGA
AAGTTCGCCAGTGA

Upstream 100 bases:

>100_bases
GTACCATGACGCTGCAGGCCACTCTGCAGGAGGGCAGTATCTGGTTATCCGACGCTCGGAATAATCTGGAAATTCAGCTT
ACCGCCTGGCAAGCGTCGGC

Downstream 100 bases:

>100_bases
AGGCGTCGGCGAACGGGTGAAATGGATGATAAGGAAAGCAAAGTGAAGAAAATCGTATTCTCCGTGATAGCGGCCTGTTC
GCTGTTCGCGCTGTTTGGTT

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MITISRSVALADDEIVLSGIRAQGAGGQHVNKASTAIHLRFDIKASSLPEFYKERLLAASHHLISADGVVIIKAQEYRSQ
EMNREAAIARLVALIKELTAVQKSRRETRPTRASKERRLASKAQKSSVKALRGKVRQ

Sequences:

>Translated_137_residues
MITISRSVALADDEIVLSGIRAQGAGGQHVNKASTAIHLRFDIKASSLPEFYKERLLAASHHLISADGVVIIKAQEYRSQ
EMNREAAIARLVALIKELTAVQKSRRETRPTRASKERRLASKAQKSSVKALRGKVRQ
>Mature_137_residues
MITISRSVALADDEIVLSGIRAQGAGGQHVNKASTAIHLRFDIKASSLPEFYKERLLAASHHLISADGVVIIKAQEYRSQ
EMNREAAIARLVALIKELTAVQKSRRETRPTRASKERRLASKAQKSSVKALRGKVRQ

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=136, Percent_Identity=81.6176470588235, Blast_Score=228, Evalue=8e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15128; Mature: 15128

Theoretical pI: Translated: 11.43; Mature: 11.43

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITISRSVALADDEIVLSGIRAQGAGGQHVNKASTAIHLRFDIKASSLPEFYKERLLAAS
CEEECCCEEECCCHHHEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
HHLISADGVVIIKAQEYRSQEMNREAAIARLVALIKELTAVQKSRRETRPTRASKERRLA
HCEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SKAQKSSVKALRGKVRQ
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MITISRSVALADDEIVLSGIRAQGAGGQHVNKASTAIHLRFDIKASSLPEFYKERLLAAS
CEEECCCEEECCCHHHEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
HHLISADGVVIIKAQEYRSQEMNREAAIARLVALIKELTAVQKSRRETRPTRASKERRLA
HCEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SKAQKSSVKALRGKVRQ
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]