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The map label for this gene is yadE [H]

Identifier: 238893117

GI number: 238893117

Start: 948889

End: 950136

Strand: Direct

Name: yadE [H]

Synonym: KP1_0965

Alternate gene names: 238893117

Gene position: 948889-950136 (Clockwise)

Preceding gene: 238893116

Following gene: 238893127

Centisome position: 18.08

GC content: 56.01

Gene sequence:

>1248_bases
ATGCTTGCCCGATTTTTGACCCTGCTTCTTTTCCTGACCTCACTCAGCGCCTCCGCCAGCCTGCTTAGCCAGCAGGGCAA
GGCTGTGCGCTATATGCAAACCACCGAAGACGCGGTCATCTGGGCGCAGGTGGGAAACCATGTGGTCAGCGTCGGCAATG
TTCGTGCCGGGCAGATCCTCGCAGTCGTCCCGACGGCGGCTGACTACTATGAGTTTCGTTTCGGCTTTGGCACCGGGTTT
ATTGATAAAGGGCATCTCGAGCCGGTGCAGGGCAAGCAGCGGGTGGAGGACCGTTTGGGGGATCTTAATAAACCGCTGAG
TAACCAAAATTTACTCACCTGGAAAGATACACCGCTCTATGACGCTCCCTCGGTAAGCAGCGCGCCGTTCGGCACGCTGG
CCAACAATCTGCGCTATCCGATCCTCAGCAAGCTGAAGGACCGGCTCAATCAGACCTGGTTTCAGATCCGCATTGGCGAC
CGGCTGGCGTGGGTCAGTAGTCTGGACGCGCAGGAGGATCACGGTATTCCCGTGCTGACCTATCACCATATTCTGCGCGA
TGAAGAGAACACCCGTTTTCGTCATACGTCGACCACCACCTCGGTTCGCGCCTTCACGAATCAGATGACCTGGCTGCGCG
ATCAGGGCTATACCACGCTGACCCTGTATCAGCTGGAAGGCTATGTGCGTAATAAAATCAATCTCCCGGCGCGGGCGGTG
GCGATCACTTTCGATGATGGCTTGAAATCGGTGAACCGCTACGCCTATCCGGTGCTGAAACAGTACGGTTTCCATGCCAC
CGCGTTTATTATCTCCTCGCGTATTAAGCGCCATCCGCAGAAGTGGGATCCGAAATCCCTGCAGTTTATGAGCATTTCCG
AGCTACGCCAGATCCAGGACGTCTTTGATATTCAGTCGCATACTCACTTCCTGCATCGGGTTGACGCCGGCCGGCGGCCG
ATTTTATTCAGTCGCAATTACCATAATATTCTGTTTGATTTCGCCCGCTCGCGCCGGGCGCTGAGCCAGTTTAATCCGCA
CGTTCTCTACCTTTCCTATCCCTTCGGCGGCTATAACGCTACGGCGGTGCAGGCGGCGAATGACGCCGGGTTTCATATGG
CGGTAACGACGGTGCGTGGGAAGGTGAAGCCGGGGGACAATCCGTTTCTGTTAAAGCGGTTATATATCTTACGCACGGAT
TCGCTGGAGACGATGTCGCGGCTGATCAGTAACCAGCCGCAGGGGTAA

Upstream 100 bases:

>100_bases
CCGTTCCGGTTGCGCCATGATGCCTGGGGAAATTAAGCAGCGGGACAGATACCGCTTTTGTTACAATAACCGCCGTTGAT
GGTATAACGGTTTGATGCGT

Downstream 100 bases:

>100_bases
TACCGACGCTGCGCCTGAGCGCAGCGTCGCGGCCATCAGGCGACCTGTACCGGAATAGCTTTCGCCTGGCGCTTCATTTC
GTTGTCGCCTTCGAAGTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MLARFLTLLLFLTSLSASASLLSQQGKAVRYMQTTEDAVIWAQVGNHVVSVGNVRAGQILAVVPTAADYYEFRFGFGTGF
IDKGHLEPVQGKQRVEDRLGDLNKPLSNQNLLTWKDTPLYDAPSVSSAPFGTLANNLRYPILSKLKDRLNQTWFQIRIGD
RLAWVSSLDAQEDHGIPVLTYHHILRDEENTRFRHTSTTTSVRAFTNQMTWLRDQGYTTLTLYQLEGYVRNKINLPARAV
AITFDDGLKSVNRYAYPVLKQYGFHATAFIISSRIKRHPQKWDPKSLQFMSISELRQIQDVFDIQSHTHFLHRVDAGRRP
ILFSRNYHNILFDFARSRRALSQFNPHVLYLSYPFGGYNATAVQAANDAGFHMAVTTVRGKVKPGDNPFLLKRLYILRTD
SLETMSRLISNQPQG

Sequences:

>Translated_415_residues
MLARFLTLLLFLTSLSASASLLSQQGKAVRYMQTTEDAVIWAQVGNHVVSVGNVRAGQILAVVPTAADYYEFRFGFGTGF
IDKGHLEPVQGKQRVEDRLGDLNKPLSNQNLLTWKDTPLYDAPSVSSAPFGTLANNLRYPILSKLKDRLNQTWFQIRIGD
RLAWVSSLDAQEDHGIPVLTYHHILRDEENTRFRHTSTTTSVRAFTNQMTWLRDQGYTTLTLYQLEGYVRNKINLPARAV
AITFDDGLKSVNRYAYPVLKQYGFHATAFIISSRIKRHPQKWDPKSLQFMSISELRQIQDVFDIQSHTHFLHRVDAGRRP
ILFSRNYHNILFDFARSRRALSQFNPHVLYLSYPFGGYNATAVQAANDAGFHMAVTTVRGKVKPGDNPFLLKRLYILRTD
SLETMSRLISNQPQG
>Mature_415_residues
MLARFLTLLLFLTSLSASASLLSQQGKAVRYMQTTEDAVIWAQVGNHVVSVGNVRAGQILAVVPTAADYYEFRFGFGTGF
IDKGHLEPVQGKQRVEDRLGDLNKPLSNQNLLTWKDTPLYDAPSVSSAPFGTLANNLRYPILSKLKDRLNQTWFQIRIGD
RLAWVSSLDAQEDHGIPVLTYHHILRDEENTRFRHTSTTTSVRAFTNQMTWLRDQGYTTLTLYQLEGYVRNKINLPARAV
AITFDDGLKSVNRYAYPVLKQYGFHATAFIISSRIKRHPQKWDPKSLQFMSISELRQIQDVFDIQSHTHFLHRVDAGRRP
ILFSRNYHNILFDFARSRRALSQFNPHVLYLSYPFGGYNATAVQAANDAGFHMAVTTVRGKVKPGDNPFLLKRLYILRTD
SLETMSRLISNQPQG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=415, Percent_Identity=78.0722891566265, Blast_Score=688, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 47283; Mature: 47283

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLARFLTLLLFLTSLSASASLLSQQGKAVRYMQTTEDAVIWAQVGNHVVSVGNVRAGQIL
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEEEEECCCCCCEEE
AVVPTAADYYEFRFGFGTGFIDKGHLEPVQGKQRVEDRLGDLNKPLSNQNLLTWKDTPLY
EEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCC
DAPSVSSAPFGTLANNLRYPILSKLKDRLNQTWFQIRIGDRLAWVSSLDAQEDHGIPVLT
CCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEEEEEECCEEEEHHCCCCCCCCCCEEEE
YHHILRDEENTRFRHTSTTTSVRAFTNQMTWLRDQGYTTLTLYQLEGYVRNKINLPARAV
EHHHHCCCCCCCEEECCCCHHHHHHHHHHHEEECCCCEEEEEEEECCHHHCCCCCCEEEE
AITFDDGLKSVNRYAYPVLKQYGFHATAFIISSRIKRHPQKWDPKSLQFMSISELRQIQD
EEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHH
VFDIQSHTHFLHRVDAGRRPILFSRNYHNILFDFARSRRALSQFNPHVLYLSYPFGGYNA
HHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
TAVQAANDAGFHMAVTTVRGKVKPGDNPFLLKRLYILRTDSLETMSRLISNQPQG
EEEEECCCCCCEEEEEEEECCCCCCCCHHHHHEEEEHCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MLARFLTLLLFLTSLSASASLLSQQGKAVRYMQTTEDAVIWAQVGNHVVSVGNVRAGQIL
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEEEEECCCCCCEEE
AVVPTAADYYEFRFGFGTGFIDKGHLEPVQGKQRVEDRLGDLNKPLSNQNLLTWKDTPLY
EEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCC
DAPSVSSAPFGTLANNLRYPILSKLKDRLNQTWFQIRIGDRLAWVSSLDAQEDHGIPVLT
CCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEEEEEECCEEEEHHCCCCCCCCCCEEEE
YHHILRDEENTRFRHTSTTTSVRAFTNQMTWLRDQGYTTLTLYQLEGYVRNKINLPARAV
EHHHHCCCCCCCEEECCCCHHHHHHHHHHHEEECCCCEEEEEEEECCHHHCCCCCCEEEE
AITFDDGLKSVNRYAYPVLKQYGFHATAFIISSRIKRHPQKWDPKSLQFMSISELRQIQD
EEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHH
VFDIQSHTHFLHRVDAGRRPILFSRNYHNILFDFARSRRALSQFNPHVLYLSYPFGGYNA
HHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
TAVQAANDAGFHMAVTTVRGKVKPGDNPFLLKRLYILRTDSLETMSRLISNQPQG
EEEEECCCCCCEEEEEEEECCCCCCCCHHHHHEEEEHCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]