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The map label for this gene is yadH [H]

Identifier: 238893115

GI number: 238893115

Start: 947491

End: 948261

Strand: Direct

Name: yadH [H]

Synonym: KP1_0963

Alternate gene names: 238893115

Gene position: 947491-948261 (Clockwise)

Preceding gene: 238893114

Following gene: 238893116

Centisome position: 18.05

GC content: 57.72

Gene sequence:

>771_bases
ATGATGCAGCTTTATTGGGTCGCGCTGAAAAGCATCTGGACCAAAGAGATCCACCGTTTTATGCGCATCTGGGTACAGAC
GCTGGTGCCGCCGGTGATCACCATGACCCTGTATTTCGTGATCTTTGGCAACCTGATCGGCTCGCGCATTGGTGAGATGC
ATGGTTTTACCTATATGCAGTTTATCGTCCCAGGCCTGATCATGATGGCGGTGATCACTAATGCTTACGCCAACGTCGCC
TCATCCTTCTTCAGCGCCAAGTTTCAGCGCAATATTGAAGAGCTGCTGGTGGCGCCAGTGCCGACGCATGTGATTATCGC
CGGCTACGTGGGCGGCGGGGTAGCGCGAGGACTGTGCGTAGGTATCCTGGTGACCGCGGTGTCGCTATTCTTTGTGCCGT
TCCAGGTTCACTCCTGGCTGTTTGTCGCCCTGACGCTGCTCCTCACCGCGGTGCTGTTCTCGCTGGCCGGGCTGCTGAAC
GCGGTGTTTGCCAAGACCTTCGATGACATTAGCCTGATCCCGACCTTTGTGCTGACGCCGCTGACCTATCTCGGCGGGGT
GTTCTACTCGCTGACCCTGCTGCCGCCGTTCTGGCAGGGGCTGTCGCATCTGAACCCCATCGTCTACATGATCAGCGGTT
TTCGCTTCGGCTTCCTCGGTATCAACGACGTCCCGCTGGCGACCACCTTCGCCGTGCTGGTGGTGTTCATTGTCGCCTTC
TATCTGCTGTGCTGGTCGTTAATTCAGCGCGGTCGCGGCCTGCGTAGCTGA

Upstream 100 bases:

>100_bases
TGAGCGCCCAGGGGGTGCAGGTACTGAGTATGCGTAACAAAGCTAACCGTCTGGAAGAGCTGTTTGTCACGCTGGTGCAT
GAGCGAAAAGGAGAATCAGC

Downstream 100 bases:

>100_bases
TACTCATCATGGTTAGCGCTTCCTGAAGTAAATATGCGAAGCGCTAACCGCTTATCTTTGACTCCCATCACCGATACGTC
ATCTTCACCTTGCTACATTA

Product: putative ABC transport system integral membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MMQLYWVALKSIWTKEIHRFMRIWVQTLVPPVITMTLYFVIFGNLIGSRIGEMHGFTYMQFIVPGLIMMAVITNAYANVA
SSFFSAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLCVGILVTAVSLFFVPFQVHSWLFVALTLLLTAVLFSLAGLLN
AVFAKTFDDISLIPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRFGFLGINDVPLATTFAVLVVFIVAF
YLLCWSLIQRGRGLRS

Sequences:

>Translated_256_residues
MMQLYWVALKSIWTKEIHRFMRIWVQTLVPPVITMTLYFVIFGNLIGSRIGEMHGFTYMQFIVPGLIMMAVITNAYANVA
SSFFSAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLCVGILVTAVSLFFVPFQVHSWLFVALTLLLTAVLFSLAGLLN
AVFAKTFDDISLIPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRFGFLGINDVPLATTFAVLVVFIVAF
YLLCWSLIQRGRGLRS
>Mature_256_residues
MMQLYWVALKSIWTKEIHRFMRIWVQTLVPPVITMTLYFVIFGNLIGSRIGEMHGFTYMQFIVPGLIMMAVITNAYANVA
SSFFSAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLCVGILVTAVSLFFVPFQVHSWLFVALTLLLTAVLFSLAGLLN
AVFAKTFDDISLIPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRFGFLGINDVPLATTFAVLVVFIVAF
YLLCWSLIQRGRGLRS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=256, Percent_Identity=93.359375, Blast_Score=483, Evalue=1e-138,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28534; Mature: 28534

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQLYWVALKSIWTKEIHRFMRIWVQTLVPPVITMTLYFVIFGNLIGSRIGEMHGFTYMQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIVPGLIMMAVITNAYANVASSFFSAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLCV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHH
GILVTAVSLFFVPFQVHSWLFVALTLLLTAVLFSLAGLLNAVFAKTFDDISLIPTFVLTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRFGFLGINDVPLATTFAVLVVFIVAF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHH
YLLCWSLIQRGRGLRS
HHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]