Click here to switch to the map view.

The map label for this gene is yfcI [C]

Identifier: 238892420

GI number: 238892420

Start: 184210

End: 185118

Strand: Reverse

Name: yfcI [C]

Synonym: KP1_0180

Alternate gene names: 238892420

Gene position: 185118-184210 (Counterclockwise)

Preceding gene: 238892421

Following gene: 238892416

Centisome position: 3.53

GC content: 55.56

Gene sequence:

>909_bases
ATGGCGGAAACGGCGACCCCTCATGATGCGATATTTAAAACTTTTCTCTCACGGGTAGAGACGGCGCGCGATTTTATCGA
GCTCCACCTGCCTCCGTCGTTAACACAGATCTGCAAACTGGACACCCTGCGTCTGGAATCCGGCAGCTTTCTCGAAGACG
ATCTCAGGCCTTACTACAGCGATATCCTTTATTCGCTGGAAACCACCCGCGGTTCGGGCTATGTCCATGTTCTGATCGAG
CACCAGAGCGCACCCGATAAGCTGATGGCCTTTCGCTTAATGCGCTATGCCATCGCCGCCATGCAGCGGCACCTGGAGAG
CGGCCATAAAACGCTGCCTCTGGTTATCCCTATTCTCTTCTATCAGGGACGACGCAGCCCCTATCCCTGGTCGATGCGCT
GGCTGGATAATTTTGCCGATCCTGAGACCGCCAGCCAGCTGTATAGCGGGTCGTTTCCGCTGGTCGATATCACGGTGATC
CCCGACGACGACATCATGCAGCACCGCAGCATGGCAGCCCTGACGCTGGTGCAAAAGCACATCCGCCAGCGCGATATGGC
GCAATTGCTGGATAAGTTGACCCACCTCTTAATGCTGGAGCAGATGAGCGGACAACAAATCACCGTATTGGTAAACTATA
TGGCTCAGGCAGGGGATGCCGAAGATACTCGGACACTCTTGTACGGGCTGGCACAGCGCGTGCCGCAGCATGGAGGATTA
CTGATGACGCTGGCGGAAACATGGCTTGCAGAAGGTATGGAGAAAGGCGTACAGCAGGGCATAAAAGAAGGTAAACACCA
GGCTCTGGTGCAGGTTGCCGAAGCGATGCGCAGTCGCGGTATTGATGACCAGGCGATTATGGAAATGACCGGTCTGTCTG
AAGACGAGCTGCAGCGGCTTCGCCACTGA

Upstream 100 bases:

>100_bases
GCCGGCGCGCAAAGTGGGTAATTAATTTTTTTGCCCGCTGTCGGCGCTGAACCCGCCGTGCCAGGATGCCGCCAGATACG
TGATTCACGGATGAACGGCA

Downstream 100 bases:

>100_bases
TACTTTCCCACCCGGAAACAACCGGGTGGGAAACAGCATGCCGGTTAACGCGAGATAATCAGGTGGATGCCGAAGCCCGC
AAACAGCGTACCGGCGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MAETATPHDAIFKTFLSRVETARDFIELHLPPSLTQICKLDTLRLESGSFLEDDLRPYYSDILYSLETTRGSGYVHVLIE
HQSAPDKLMAFRLMRYAIAAMQRHLESGHKTLPLVIPILFYQGRRSPYPWSMRWLDNFADPETASQLYSGSFPLVDITVI
PDDDIMQHRSMAALTLVQKHIRQRDMAQLLDKLTHLLMLEQMSGQQITVLVNYMAQAGDAEDTRTLLYGLAQRVPQHGGL
LMTLAETWLAEGMEKGVQQGIKEGKHQALVQVAEAMRSRGIDDQAIMEMTGLSEDELQRLRH

Sequences:

>Translated_302_residues
MAETATPHDAIFKTFLSRVETARDFIELHLPPSLTQICKLDTLRLESGSFLEDDLRPYYSDILYSLETTRGSGYVHVLIE
HQSAPDKLMAFRLMRYAIAAMQRHLESGHKTLPLVIPILFYQGRRSPYPWSMRWLDNFADPETASQLYSGSFPLVDITVI
PDDDIMQHRSMAALTLVQKHIRQRDMAQLLDKLTHLLMLEQMSGQQITVLVNYMAQAGDAEDTRTLLYGLAQRVPQHGGL
LMTLAETWLAEGMEKGVQQGIKEGKHQALVQVAEAMRSRGIDDQAIMEMTGLSEDELQRLRH
>Mature_301_residues
AETATPHDAIFKTFLSRVETARDFIELHLPPSLTQICKLDTLRLESGSFLEDDLRPYYSDILYSLETTRGSGYVHVLIEH
QSAPDKLMAFRLMRYAIAAMQRHLESGHKTLPLVIPILFYQGRRSPYPWSMRWLDNFADPETASQLYSGSFPLVDITVIP
DDDIMQHRSMAALTLVQKHIRQRDMAQLLDKLTHLLMLEQMSGQQITVLVNYMAQAGDAEDTRTLLYGLAQRVPQHGGLL
MTLAETWLAEGMEKGVQQGIKEGKHQALVQVAEAMRSRGIDDQAIMEMTGLSEDELQRLRH

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1788643, Length=297, Percent_Identity=51.5151515151515, Blast_Score=331, Evalue=3e-92,
Organism=Escherichia coli, GI1789816, Length=295, Percent_Identity=50.5084745762712, Blast_Score=312, Evalue=2e-86,
Organism=Escherichia coli, GI1786324, Length=299, Percent_Identity=49.8327759197324, Blast_Score=303, Evalue=1e-83,
Organism=Escherichia coli, GI1788577, Length=296, Percent_Identity=48.3108108108108, Blast_Score=300, Evalue=5e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 34351; Mature: 34220

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETATPHDAIFKTFLSRVETARDFIELHLPPSLTQICKLDTLRLESGSFLEDDLRPYYS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHH
DILYSLETTRGSGYVHVLIEHQSAPDKLMAFRLMRYAIAAMQRHLESGHKTLPLVIPILF
HHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
YQGRRSPYPWSMRWLDNFADPETASQLYSGSFPLVDITVIPDDDIMQHRSMAALTLVQKH
HCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
IRQRDMAQLLDKLTHLLMLEQMSGQQITVLVNYMAQAGDAEDTRTLLYGLAQRVPQHGGL
HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
LMTLAETWLAEGMEKGVQQGIKEGKHQALVQVAEAMRSRGIDDQAIMEMTGLSEDELQRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH
RH
CC
>Mature Secondary Structure 
AETATPHDAIFKTFLSRVETARDFIELHLPPSLTQICKLDTLRLESGSFLEDDLRPYYS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHH
DILYSLETTRGSGYVHVLIEHQSAPDKLMAFRLMRYAIAAMQRHLESGHKTLPLVIPILF
HHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
YQGRRSPYPWSMRWLDNFADPETASQLYSGSFPLVDITVIPDDDIMQHRSMAALTLVQKH
HCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
IRQRDMAQLLDKLTHLLMLEQMSGQQITVLVNYMAQAGDAEDTRTLLYGLAQRVPQHGGL
HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
LMTLAETWLAEGMEKGVQQGIKEGKHQALVQVAEAMRSRGIDDQAIMEMTGLSEDELQRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH
RH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]