| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028956
Identifier: 238028956
GI number: 238028956
Start: 3889888
End: 3890304
Strand: Direct
Name: 238028956
Synonym: bglu_1g34210
Alternate gene names: NA
Gene position: 3889888-3890304 (Clockwise)
Preceding gene: 238028950
Following gene: 238028959
Centisome position: 99.57
GC content: 70.26
Gene sequence:
>417_bases ATGACACCCCGCATTATTGGCATCGACCACGTCGTGCTGCGCACCCTCGATATGACGGCGATGACGCGTTTCTATTGCGA CGTGCTGGGCTGCCACCTCGAGAAGACGCAGCCCGAGCTCGGGCTCGTGCAACTGCGCGCGGGCGCCTCGCTGATCGACC TGCTCGACCGCGACGCGCCGCTCGACCGCGCGGACAGCGGCGTGCCCGGCACGGGCCGCAACCTCGATCATCTCTGCCTG CGCGTCGATCCGTTCGACGCCGACGCGCTGCGCGCCCATCTCGCCGCGCACGCGGCGCGGCCGGGCGAAACCGCCGAGCG CTACGGCGCGGACGGCTACGGCCCGTCGATCTACCTGTTCGATCCGGAGGGCAACATGGTCGAGTTGAAAGGGCCGCCGC GCGCCGCAGCTGGCTGA
Upstream 100 bases:
>100_bases TTCGCGCGCGGCCCGTCCGGCACGCCGCGCCCACGCGCCGGCTGTCCCGATCGACTAGACTCGACGCATCGAAAGCATCG CGCGACAGGAGGGCCCCCCG
Downstream 100 bases:
>100_bases AGCGCGCTCGGCGCCGCAGCGGCGGCCGCAGTGCCGGTGACAACCAGGGCCGGGGACAGGAGCCGCGCCGGCACCCCGGG CCGGCGCGCGGGCATCAGCG
Product: Glyoxalase family protein
Products: NA
Alternate protein names: Lactoylglutathione Lyase; Glyoxalase Family Protein; Ring-Cleaving Dioxygenase; Methylmalonyl CoA Epimerase; Dioxygenase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance; Dioxygenase
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTPRIIGIDHVVLRTLDMTAMTRFYCDVLGCHLEKTQPELGLVQLRAGASLIDLLDRDAPLDRADSGVPGTGRNLDHLCL RVDPFDADALRAHLAAHAARPGETAERYGADGYGPSIYLFDPEGNMVELKGPPRAAAG
Sequences:
>Translated_138_residues MTPRIIGIDHVVLRTLDMTAMTRFYCDVLGCHLEKTQPELGLVQLRAGASLIDLLDRDAPLDRADSGVPGTGRNLDHLCL RVDPFDADALRAHLAAHAARPGETAERYGADGYGPSIYLFDPEGNMVELKGPPRAAAG >Mature_137_residues TPRIIGIDHVVLRTLDMTAMTRFYCDVLGCHLEKTQPELGLVQLRAGASLIDLLDRDAPLDRADSGVPGTGRNLDHLCLR VDPFDADALRAHLAAHAARPGETAERYGADGYGPSIYLFDPEGNMVELKGPPRAAAG
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14877; Mature: 14746
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRIIGIDHVVLRTLDMTAMTRFYCDVLGCHLEKTQPELGLVQLRAGASLIDLLDRDAP CCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHCCCCC LDRADSGVPGTGRNLDHLCLRVDPFDADALRAHLAAHAARPGETAERYGADGYGPSIYLF CCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEE DPEGNMVELKGPPRAAAG CCCCCEEEECCCCCCCCC >Mature Secondary Structure TPRIIGIDHVVLRTLDMTAMTRFYCDVLGCHLEKTQPELGLVQLRAGASLIDLLDRDAP CCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHCCCCC LDRADSGVPGTGRNLDHLCLRVDPFDADALRAHLAAHAARPGETAERYGADGYGPSIYLF CCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEE DPEGNMVELKGPPRAAAG CCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA