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The map label for this gene is yrhP [H]

Identifier: 238028943

GI number: 238028943

Start: 3873713

End: 3874357

Strand: Reverse

Name: yrhP [H]

Synonym: bglu_1g34080

Alternate gene names: 238028943

Gene position: 3874357-3873713 (Counterclockwise)

Preceding gene: 238028944

Following gene: 238028942

Centisome position: 99.18

GC content: 71.63

Gene sequence:

>645_bases
ATGCTCGGTATCACCCATTTCGGTTTCTTCTTGCTGGCCGTGTTCCTGCTGAACGTCACGCCCGGCCCCGACACCGCCTA
CATCATCGGCCGCAGCGTCGCGCAGGGCCGCGGTGCCGGGCTGGTTTCGGCGGCCGGCATCGCCACCGGCTGCGGCATCC
ACTCGCTCGCCTGCGCGTTCGGGCTGACCGCGCTGATCGCGGCATCCCCGGCCGCGTTCACGGTAATCAAGTTCGCGGGC
GCCGCGTACCTGATCTACCTCGGCGTGAGGCTCGCGTTCACGAAGCCCGCCGCGCCCGGCGCGGCTCGGCCGGCGGCGCA
ATCCGGTCCCGCGCGGCCGCTGCGCCAGCTGTTCGTGCAGGGCGTCACCACCAACCTGCTCAATCCGAAGGTGGTGCTGT
TCTTCGTCTCGTTCTTCCCGCAGTTCGTCGCCGCCGACAGCGCCCACAAGACGCTCGCGTTCCTCGTGCTGGGCGGCGTG
TTCGTGCTGCAGGGGCTGGCCTGGAGCGCGCTCGTCGCCTGGGCCGCCGGCAGCCTCACGCGCCGTCTCGGCGGCAACGC
GGCCGTGAAGAAATGGCTCGACCGCCTGGTGGGCGGCGCGTTCGTGGGCCTCGGGCTGCGCCTCGCGGCCGCCACGCAGC
GCTGA

Upstream 100 bases:

>100_bases
GCGCCGCGCGAATGCGCCGCGTTCGGCTTCCTCCACCTTCATATACCGTCCCGTCCGCGCGTAGAATGCGAACGTCATTC
ACGCGGCTGCAGGCACCTCC

Downstream 100 bases:

>100_bases
TTACACGCGTAACGCGCCGCTAATTTCGAGATATTGAATTTTCCGCGCGCAGCCTTATCTAACGAATCGCTTACAATTTC
TCGGCGGCGCGCCACGGATG

Product: lysine exporter family protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MLGITHFGFFLLAVFLLNVTPGPDTAYIIGRSVAQGRGAGLVSAAGIATGCGIHSLACAFGLTALIAASPAAFTVIKFAG
AAYLIYLGVRLAFTKPAAPGAARPAAQSGPARPLRQLFVQGVTTNLLNPKVVLFFVSFFPQFVAADSAHKTLAFLVLGGV
FVLQGLAWSALVAWAAGSLTRRLGGNAAVKKWLDRLVGGAFVGLGLRLAAATQR

Sequences:

>Translated_214_residues
MLGITHFGFFLLAVFLLNVTPGPDTAYIIGRSVAQGRGAGLVSAAGIATGCGIHSLACAFGLTALIAASPAAFTVIKFAG
AAYLIYLGVRLAFTKPAAPGAARPAAQSGPARPLRQLFVQGVTTNLLNPKVVLFFVSFFPQFVAADSAHKTLAFLVLGGV
FVLQGLAWSALVAWAAGSLTRRLGGNAAVKKWLDRLVGGAFVGLGLRLAAATQR
>Mature_214_residues
MLGITHFGFFLLAVFLLNVTPGPDTAYIIGRSVAQGRGAGLVSAAGIATGCGIHSLACAFGLTALIAASPAAFTVIKFAG
AAYLIYLGVRLAFTKPAAPGAARPAAQSGPARPLRQLFVQGVTTNLLNPKVVLFFVSFFPQFVAADSAHKTLAFLVLGGV
FVLQGLAWSALVAWAAGSLTRRLGGNAAVKKWLDRLVGGAFVGLGLRLAAATQR

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=207, Percent_Identity=26.5700483091787, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI48994979, Length=149, Percent_Identity=34.2281879194631, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI48994978, Length=193, Percent_Identity=28.4974093264249, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786522, Length=211, Percent_Identity=29.3838862559242, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21981; Mature: 21981

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGITHFGFFLLAVFLLNVTPGPDTAYIIGRSVAQGRGAGLVSAAGIATGCGIHSLACAF
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCHHHHHHHHHCCCHHHHHHHH
GLTALIAASPAAFTVIKFAGAAYLIYLGVRLAFTKPAAPGAARPAAQSGPARPLRQLFVQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHH
GVTTNLLNPKVVLFFVSFFPQFVAADSAHKTLAFLVLGGVFVLQGLAWSALVAWAAGSLT
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLGGNAAVKKWLDRLVGGAFVGLGLRLAAATQR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLGITHFGFFLLAVFLLNVTPGPDTAYIIGRSVAQGRGAGLVSAAGIATGCGIHSLACAF
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCHHHHHHHHHCCCHHHHHHHH
GLTALIAASPAAFTVIKFAGAAYLIYLGVRLAFTKPAAPGAARPAAQSGPARPLRQLFVQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHH
GVTTNLLNPKVVLFFVSFFPQFVAADSAHKTLAFLVLGGVFVLQGLAWSALVAWAAGSLT
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLGGNAAVKKWLDRLVGGAFVGLGLRLAAATQR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]