| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028925
Identifier: 238028925
GI number: 238028925
Start: 3852430
End: 3853269
Strand: Reverse
Name: 238028925
Synonym: bglu_1g33900
Alternate gene names: NA
Gene position: 3853269-3852430 (Counterclockwise)
Preceding gene: 238028926
Following gene: 238028924
Centisome position: 98.64
GC content: 68.57
Gene sequence:
>840_bases ATGGCGAAGCCAGCGTCGCTCGACGATTTCCGTGTGCCGTACCACACCGACGAGAAGGCCGCCGCGGCGTTCCGGCTCGA GGCGTTCGAGCCCGGCGCGAAGCCGTTCTCGAGCGGCTCGAAGGAGGCCGATCGCGCGCGTCTGTCCGAGCTGTCGATGA AGATCGACGCGCTGCAGGACATGCTGCACACCCAGCCGCGCAAGCGCCTGCTGCTGGTGCTGCAGGGCATGGACACGAGC GGCAAGGACGGCACCGTGCGCGCCGTGTTCCACGAGGTCGATCCGCTCGGCCTGCGCGTGGTGCCGTTCAAGGCGCCCAC CGCGGTCGAGCTCGCGCACGACTTTCTCTGGCGCGTCCACGCGCAGGTGCCGGCCGCCGGCGAGCTGACGATCTTCAACC GCAGCCATTACGAGGACGTGCTGGTGCCGCGCGTGCTCGGCGGCATCGACGAGGCCGAATGCAAGCGCCGCCACCGGCAG ATCCGCGAGTTCGAGGCGATGCTGGCCGAGTCGGGCACGACGATCGTCAAATGCTTCCTGCACATCTCGAAGGACGAGCA GCGCGCGCGGCTGCAGGCGCGCGTGGACGATCCGGCCAAGCACTGGAAGTTCGACCTGTCCGACATCGAGGCGCGCAAGG ACTGGGACGCCTATCAGCTCGCCTATCGAGACGCGCTGGCCGCCACCTCCGCCCCGCACGCGCCGTGGTACATGATCCCG GCCGACTCGAAGACGCATCGCAACGTGATGATCGCCGAGCTGCTGCTGCGCGAGATGACGGCGATGAAGCTCGCCTATCC GCCCGCCAAGCCCGAGCTGGCGGGCGTGAAGATCGCGTGA
Upstream 100 bases:
>100_bases GGCCGCTCGCGTGGGTCGCAGCCGCCGGCCGGCCGCTTGCGTTATGCTCGACGGCTTGGCGCCGCAGCGGCGACTTCCAA ATCCCGTTAAGGAGGCATTG
Downstream 100 bases:
>100_bases CGGCGCCGCGTGGGGCGCCATCCATCGAACCCGGAACACTGAACGGAAACACATCATGCTGCGTGTCATTACGGCGAACC TGAACGGCATCCGCTCCGCC
Product: polyphosphate kinase
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MAKPASLDDFRVPYHTDEKAAAAFRLEAFEPGAKPFSSGSKEADRARLSELSMKIDALQDMLHTQPRKRLLLVLQGMDTS GKDGTVRAVFHEVDPLGLRVVPFKAPTAVELAHDFLWRVHAQVPAAGELTIFNRSHYEDVLVPRVLGGIDEAECKRRHRQ IREFEAMLAESGTTIVKCFLHISKDEQRARLQARVDDPAKHWKFDLSDIEARKDWDAYQLAYRDALAATSAPHAPWYMIP ADSKTHRNVMIAELLLREMTAMKLAYPPAKPELAGVKIA
Sequences:
>Translated_279_residues MAKPASLDDFRVPYHTDEKAAAAFRLEAFEPGAKPFSSGSKEADRARLSELSMKIDALQDMLHTQPRKRLLLVLQGMDTS GKDGTVRAVFHEVDPLGLRVVPFKAPTAVELAHDFLWRVHAQVPAAGELTIFNRSHYEDVLVPRVLGGIDEAECKRRHRQ IREFEAMLAESGTTIVKCFLHISKDEQRARLQARVDDPAKHWKFDLSDIEARKDWDAYQLAYRDALAATSAPHAPWYMIP ADSKTHRNVMIAELLLREMTAMKLAYPPAKPELAGVKIA >Mature_278_residues AKPASLDDFRVPYHTDEKAAAAFRLEAFEPGAKPFSSGSKEADRARLSELSMKIDALQDMLHTQPRKRLLLVLQGMDTSG KDGTVRAVFHEVDPLGLRVVPFKAPTAVELAHDFLWRVHAQVPAAGELTIFNRSHYEDVLVPRVLGGIDEAECKRRHRQI REFEAMLAESGTTIVKCFLHISKDEQRARLQARVDDPAKHWKFDLSDIEARKDWDAYQLAYRDALAATSAPHAPWYMIPA DSKTHRNVMIAELLLREMTAMKLAYPPAKPELAGVKIA
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 31403; Mature: 31272
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPASLDDFRVPYHTDEKAAAAFRLEAFEPGAKPFSSGSKEADRARLSELSMKIDALQD CCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MLHTQPRKRLLLVLQGMDTSGKDGTVRAVFHEVDPLGLRVVPFKAPTAVELAHDFLWRVH HHHCCCHHEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHH AQVPAAGELTIFNRSHYEDVLVPRVLGGIDEAECKRRHRQIREFEAMLAESGTTIVKCFL HCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH HISKDEQRARLQARVDDPAKHWKFDLSDIEARKDWDAYQLAYRDALAATSAPHAPWYMIP HHCCCHHHHHHHHCCCCCHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEE ADSKTHRNVMIAELLLREMTAMKLAYPPAKPELAGVKIA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure AKPASLDDFRVPYHTDEKAAAAFRLEAFEPGAKPFSSGSKEADRARLSELSMKIDALQD CCCCCCCCCCCCCCCCCHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MLHTQPRKRLLLVLQGMDTSGKDGTVRAVFHEVDPLGLRVVPFKAPTAVELAHDFLWRVH HHHCCCHHEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHH AQVPAAGELTIFNRSHYEDVLVPRVLGGIDEAECKRRHRQIREFEAMLAESGTTIVKCFL HCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH HISKDEQRARLQARVDDPAKHWKFDLSDIEARKDWDAYQLAYRDALAATSAPHAPWYMIP HHCCCHHHHHHHHCCCCCHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEE ADSKTHRNVMIAELLLREMTAMKLAYPPAKPELAGVKIA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]