Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yfgC [C]

Identifier: 238028921

GI number: 238028921

Start: 3848328

End: 3849281

Strand: Direct

Name: yfgC [C]

Synonym: bglu_1g33860

Alternate gene names: 238028921

Gene position: 3848328-3849281 (Clockwise)

Preceding gene: 238028920

Following gene: 238028923

Centisome position: 98.51

GC content: 75.79

Gene sequence:

>954_bases
GTGCCGGCTGAGCGCGCGCGCAGCGCGCTGCTGGCGGGCGTGGCCGGGCTCGCGTGCGCGGCCGCGATGGCCGCCTCGCC
CGCGCCGGCCGACTCCGCCGCGCCGCAGCCCGAGCATGAGGCCGCCTACGGGCAGCCGGCCGCCGGCATGCGCTACGGCA
ACGCGTTCGCGTTCCGCAACCTGATCCCGTCGCCGGTGCTCGAGCAGATCACCGGCGCGCAGTACCAGCGGATGGTGCAG
GCGGCCGCGCAGGCCGGCACGCTGATGGCGGCCGACGATGCACGCGTCAGGCGGCTGCGCACGCTGGTCGCGCGACTGGC
GCCGTATGCGGTCAAGTGGAACGATCGCGTGAAGGACTGGCACTGGGACGTGAGCCTGGTGCGCAGCCGCGAGATCCGCG
TGCTCGGCCTGCCGGGCGGCAAGCTGCTCGTCGACGGCGGCCTGCTCGCACGGCTGCGCCTGAACGACGACGAACTGGGC
GTGCTGCTCGCGCACGAGATGGCGCACGCGCTGCGCGAGCACGCGCGCGCCTGCCTCGGCGACATGCCGCCCGCGGCGGC
GCCCGGCGCGAACCCGATTTCCTCGCTGTACGGGCTGGCCGAGCCGCTGCCCGCGCCGCCCGCGATCGCCGAGCGGCTCG
CCACGCTGCGCTACGGCGCCACCGACGAGACCGAGGCCGATGTGATCGGCGGCGACATCGCGGCCCGCGCCGGCATCGAC
CCGCGCGCCGCGATCACGCTCTGGGGCAAGCTCTCGGCCGCCACCCGCGGCGACCGCCGGCGCGGCTTCATCTACTCGCA
TCCCTATGACGCGCGCCGCCGCCAGGACCTGATGAAGCGGCTCGCCGACCTGATGCCGGTCTACGCGAAGGCGATCGGCA
AGCGCGTCGAGGCCCTGCCGCCCTATGCCGGCATCGGCGCGGTGCGCCGCCGCCCCGCCTCGCCCGTCAGTTGA

Upstream 100 bases:

>100_bases
TTCGACTATTTCCTGGTCTGCGCCATGCTCGGCATCCCGGGCCTGCTGCTGCTGTTCAAGGTCGCACCGTGGCGCAGCGG
CGCACCCGACGAGGCCCCCC

Downstream 100 bases:

>100_bases
TCTCGGCCGGCTCGCCGTTCACGACGAGGCCGTTGGCCTGCACCCAGCGGACCTCGTCGCCGGGGCTGCGGCCGAACATG
CGCTTGAACTCGCGGCTGAA

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: M48 Family Peptidase; Lipoprotein; Zn-Dependent Protease With Chaperone Function; HtpX Protein; Peptidase M; Membrane-Associated Zinc Metalloprotease Peptidase; Zinc Metallopeptidase; Exported Peptidase; Signal Peptide; Peptidase Protein; Peptidase Family; Zn-Dependent Protease With Chaperone Function Protein; Signal Peptide Protein; M48 Family Zinc Metallopeptidase; Zinc Metalloprotease; M48-Family Peptidase

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MPAERARSALLAGVAGLACAAAMAASPAPADSAAPQPEHEAAYGQPAAGMRYGNAFAFRNLIPSPVLEQITGAQYQRMVQ
AAAQAGTLMAADDARVRRLRTLVARLAPYAVKWNDRVKDWHWDVSLVRSREIRVLGLPGGKLLVDGGLLARLRLNDDELG
VLLAHEMAHALREHARACLGDMPPAAAPGANPISSLYGLAEPLPAPPAIAERLATLRYGATDETEADVIGGDIAARAGID
PRAAITLWGKLSAATRGDRRRGFIYSHPYDARRRQDLMKRLADLMPVYAKAIGKRVEALPPYAGIGAVRRRPASPVS

Sequences:

>Translated_317_residues
MPAERARSALLAGVAGLACAAAMAASPAPADSAAPQPEHEAAYGQPAAGMRYGNAFAFRNLIPSPVLEQITGAQYQRMVQ
AAAQAGTLMAADDARVRRLRTLVARLAPYAVKWNDRVKDWHWDVSLVRSREIRVLGLPGGKLLVDGGLLARLRLNDDELG
VLLAHEMAHALREHARACLGDMPPAAAPGANPISSLYGLAEPLPAPPAIAERLATLRYGATDETEADVIGGDIAARAGID
PRAAITLWGKLSAATRGDRRRGFIYSHPYDARRRQDLMKRLADLMPVYAKAIGKRVEALPPYAGIGAVRRRPASPVS
>Mature_316_residues
PAERARSALLAGVAGLACAAAMAASPAPADSAAPQPEHEAAYGQPAAGMRYGNAFAFRNLIPSPVLEQITGAQYQRMVQA
AAQAGTLMAADDARVRRLRTLVARLAPYAVKWNDRVKDWHWDVSLVRSREIRVLGLPGGKLLVDGGLLARLRLNDDELGV
LLAHEMAHALREHARACLGDMPPAAAPGANPISSLYGLAEPLPAPPAIAERLATLRYGATDETEADVIGGDIAARAGIDP
RAAITLWGKLSAATRGDRRRGFIYSHPYDARRRQDLMKRLADLMPVYAKAIGKRVEALPPYAGIGAVRRRPASPVS

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33804; Mature: 33673

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAERARSALLAGVAGLACAAAMAASPAPADSAAPQPEHEAAYGQPAAGMRYGNAFAFRN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHH
LIPSPVLEQITGAQYQRMVQAAAQAGTLMAADDARVRRLRTLVARLAPYAVKWNDRVKDW
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCH
HWDVSLVRSREIRVLGLPGGKLLVDGGLLARLRLNDDELGVLLAHEMAHALREHARACLG
HCCHHHCCCCCEEEEECCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC
DMPPAAAPGANPISSLYGLAEPLPAPPAIAERLATLRYGATDETEADVIGGDIAARAGID
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCCC
PRAAITLWGKLSAATRGDRRRGFIYSHPYDARRRQDLMKRLADLMPVYAKAIGKRVEALP
CCCEEEEHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PYAGIGAVRRRPASPVS
CCCCCHHHHCCCCCCCC
>Mature Secondary Structure 
PAERARSALLAGVAGLACAAAMAASPAPADSAAPQPEHEAAYGQPAAGMRYGNAFAFRN
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHH
LIPSPVLEQITGAQYQRMVQAAAQAGTLMAADDARVRRLRTLVARLAPYAVKWNDRVKDW
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCH
HWDVSLVRSREIRVLGLPGGKLLVDGGLLARLRLNDDELGVLLAHEMAHALREHARACLG
HCCHHHCCCCCEEEEECCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC
DMPPAAAPGANPISSLYGLAEPLPAPPAIAERLATLRYGATDETEADVIGGDIAARAGID
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCCC
PRAAITLWGKLSAATRGDRRRGFIYSHPYDARRRQDLMKRLADLMPVYAKAIGKRVEALP
CCCEEEEHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PYAGIGAVRRRPASPVS
CCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA