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The map label for this gene is regB [H]

Identifier: 238028914

GI number: 238028914

Start: 3840845

End: 3842128

Strand: Reverse

Name: regB [H]

Synonym: bglu_1g33790

Alternate gene names: 238028914

Gene position: 3842128-3840845 (Counterclockwise)

Preceding gene: 238028922

Following gene: 238028913

Centisome position: 98.35

GC content: 70.56

Gene sequence:

>1284_bases
ATGTACAGAATCACGACCACCGGCCGCGTCAATCTCGGCAACCTCTTCTGGCTGCGCACGCTCGCGATCCTCGGCCAGGT
CGTCACGATTGCCGTCGCGCAGAGCTTCTTCGGCGCGAACCTGCCGCTGCCGGCCATGCTCAGCGTGATCGCGCTCGAGG
TCGTGTTCAACGCGCTGACCTGGCTGCGCGTGCTGCGCGCGCGTCCCGAAACCAATTTCGAGCTGATGGGCCAGCTGTGG
GTGGATATCGGCGCGCTGTCCGCGCTGCTGTTCCTGTCGGGCGGCACCACCAACCCGTTCGTGTCGCTGTATCTGCCGTC
GCTGGCGATCGCGGCCGCGGTGCTGCCGTGGCATCTGATGGTCTGGCTCGCGGCCTTCTCGGTGGCCTGCTATTTCACGC
TCGGCTTCAGTTCGGTGCCGCTCAACCTGGACAACCCGGCGAACCTGTTCGACTACTACCGCGCGGGCCAGGGCGTGAAC
TTCCTGGTGTCGGTCGGCTTGATCGCCTGGTTCGTCGCGCGCATGTCGAACGCGCTGCGCCAGCGCGACGCCGCGCTCGG
CGAGGCGCAGCAGCGGCTGCTGCGCGACGAGCGGGCGGTCGCGCTCGGCGTGCAGGCCGCCACCGTCGCGCACGAGATGG
GCACGCCGCTGTCGACCATCGCGATGCTGACCGAGGAGTTGCGCGACGCCGCGCGCGCCGATCCGGGCCTCGCGCGCTAC
GACGCGGACCTGAAGGTGCTCGAGGAACAGATGTCGCAATGCACCTCGGCGCTCGCGCGGCTGCGCAGCCGCGCCTCGGG
ACCGACGCGCGAGAGCGTCGCCGCCTGGCTCGATACGTTCGGGCGCCACTGGCGGCTGCGCCATCCGCACGTGCAGTTCG
AGCAGATCGGTGAGGGGCCGTCGGGCGTCGAGCTCGTCGATTCCGTCGCCGCCGGGCAGATCCTCACGATCCTGCTCGAC
AACGCGGCCCGCGCGAGCCGCGATCGCGTCACGCTGCAGGCGCGGCTCACGCGCGTGTCGGATCGCGACACGATCGTGTT
CGAGGTGGTCGACAACGGTCCGGGCATCCCGCCCGCGCTGCGCGAGTCGCTCGGCACCGCACCCGTCGACAGCACCCAGG
GCGGCAACGGCGTCGGTCTGTATCTGGCGTTCAGCGCCGCCGCGCGGCTGGGCGGCACGATCGAACTGCACGACGCGCAG
CCGCGCGGCACGCGCGCGCTGCTGCGCTTGCCCGTAGTAAGCAGCACCACGCGGCCGGCCGAGGCGCAGCAACCGGCCGC
TTAA

Upstream 100 bases:

>100_bases
GGCGGCCGACCGCTGTCTGTGCCCCGATTGCTACGCACGCGCGCTCGCCGGGCAGCCGGCCGGCCGGCGCGTCACGCCGA
CGGAGTAAACTGCGCCGATC

Downstream 100 bases:

>100_bases
CATTCGCTGAACCGAAGGAGAAGAAAATGAGCGACAACCATTTCCTCGTGATCGATGACAACGAGGTGTTTGCCGGGACG
TTGGCGCGGGGCCTTGAACG

Product: Sensor histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MYRITTTGRVNLGNLFWLRTLAILGQVVTIAVAQSFFGANLPLPAMLSVIALEVVFNALTWLRVLRARPETNFELMGQLW
VDIGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMVWLAAFSVACYFTLGFSSVPLNLDNPANLFDYYRAGQGVN
FLVSVGLIAWFVARMSNALRQRDAALGEAQQRLLRDERAVALGVQAATVAHEMGTPLSTIAMLTEELRDAARADPGLARY
DADLKVLEEQMSQCTSALARLRSRASGPTRESVAAWLDTFGRHWRLRHPHVQFEQIGEGPSGVELVDSVAAGQILTILLD
NAARASRDRVTLQARLTRVSDRDTIVFEVVDNGPGIPPALRESLGTAPVDSTQGGNGVGLYLAFSAAARLGGTIELHDAQ
PRGTRALLRLPVVSSTTRPAEAQQPAA

Sequences:

>Translated_427_residues
MYRITTTGRVNLGNLFWLRTLAILGQVVTIAVAQSFFGANLPLPAMLSVIALEVVFNALTWLRVLRARPETNFELMGQLW
VDIGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMVWLAAFSVACYFTLGFSSVPLNLDNPANLFDYYRAGQGVN
FLVSVGLIAWFVARMSNALRQRDAALGEAQQRLLRDERAVALGVQAATVAHEMGTPLSTIAMLTEELRDAARADPGLARY
DADLKVLEEQMSQCTSALARLRSRASGPTRESVAAWLDTFGRHWRLRHPHVQFEQIGEGPSGVELVDSVAAGQILTILLD
NAARASRDRVTLQARLTRVSDRDTIVFEVVDNGPGIPPALRESLGTAPVDSTQGGNGVGLYLAFSAAARLGGTIELHDAQ
PRGTRALLRLPVVSSTTRPAEAQQPAA
>Mature_427_residues
MYRITTTGRVNLGNLFWLRTLAILGQVVTIAVAQSFFGANLPLPAMLSVIALEVVFNALTWLRVLRARPETNFELMGQLW
VDIGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMVWLAAFSVACYFTLGFSSVPLNLDNPANLFDYYRAGQGVN
FLVSVGLIAWFVARMSNALRQRDAALGEAQQRLLRDERAVALGVQAATVAHEMGTPLSTIAMLTEELRDAARADPGLARY
DADLKVLEEQMSQCTSALARLRSRASGPTRESVAAWLDTFGRHWRLRHPHVQFEQIGEGPSGVELVDSVAAGQILTILLD
NAARASRDRVTLQARLTRVSDRDTIVFEVVDNGPGIPPALRESLGTAPVDSTQGGNGVGLYLAFSAAARLGGTIELHDAQ
PRGTRALLRLPVVSSTTRPAEAQQPAA

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 46121; Mature: 46121

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRITTTGRVNLGNLFWLRTLAILGQVVTIAVAQSFFGANLPLPAMLSVIALEVVFNALT
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
WLRVLRARPETNFELMGQLWVDIGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLM
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VWLAAFSVACYFTLGFSSVPLNLDNPANLFDYYRAGQGVNFLVSVGLIAWFVARMSNALR
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QRDAALGEAQQRLLRDERAVALGVQAATVAHEMGTPLSTIAMLTEELRDAARADPGLARY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHH
DADLKVLEEQMSQCTSALARLRSRASGPTRESVAAWLDTFGRHWRLRHPHVQFEQIGEGP
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCHHHHCCCCC
SGVELVDSVAAGQILTILLDNAARASRDRVTLQARLTRVSDRDTIVFEVVDNGPGIPPAL
CCHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHH
RESLGTAPVDSTQGGNGVGLYLAFSAAARLGGTIELHDAQPRGTRALLRLPVVSSTTRPA
HHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEEECCCCCCCHHHEEECCCCCCCCCC
EAQQPAA
CCCCCCC
>Mature Secondary Structure
MYRITTTGRVNLGNLFWLRTLAILGQVVTIAVAQSFFGANLPLPAMLSVIALEVVFNALT
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
WLRVLRARPETNFELMGQLWVDIGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLM
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VWLAAFSVACYFTLGFSSVPLNLDNPANLFDYYRAGQGVNFLVSVGLIAWFVARMSNALR
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QRDAALGEAQQRLLRDERAVALGVQAATVAHEMGTPLSTIAMLTEELRDAARADPGLARY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHH
DADLKVLEEQMSQCTSALARLRSRASGPTRESVAAWLDTFGRHWRLRHPHVQFEQIGEGP
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCHHHHCCCCC
SGVELVDSVAAGQILTILLDNAARASRDRVTLQARLTRVSDRDTIVFEVVDNGPGIPPAL
CCHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHH
RESLGTAPVDSTQGGNGVGLYLAFSAAARLGGTIELHDAQPRGTRALLRLPVVSSTTRPA
HHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEEECCCCCCCHHHEEECCCCCCCCCC
EAQQPAA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]