Click here to switch to the map view.

The map label for this gene is flgC [H]

Identifier: 238028851

GI number: 238028851

Start: 3774844

End: 3775269

Strand: Reverse

Name: flgC [H]

Synonym: bglu_1g33160

Alternate gene names: 238028851

Gene position: 3775269-3774844 (Counterclockwise)

Preceding gene: 238028852

Following gene: 238028850

Centisome position: 96.64

GC content: 65.73

Gene sequence:

>426_bases
ATGCCTTCGCTGATGAACATCTTCGACGTCGCCGGTTCGGCGATGTCCGCCGAATCGCAGCGCCTGAACGTGACCGCGTC
GAACCTGGCGAACGCGGACAGCGTGACCGGCCCGGACGGCAAGCCTTACCGAGCCAAGCAGGTGGTGTTCGAGACCCAGC
CGCTCGGCGGCGCGCGCACGCGCTCCGGGCAGGGGGTGGGCGGCGTGCAGGTCAAGCAGGTGATCGACGATCCGTCGCCG
ATGAAGACCAGCTACGACCCGTCGAATCCGACCGCCGACGCCAACGGCTACGTCACGCTGCCGAACGTCGACCCGGTGCA
GGAAATGGTGAACATGATCTCGGCCTCGCGCTCGTACCAGGCGAACGTGGAGACGCTGAACACCGCCAAGCAACTGATGC
TGAAGACGCTGACGATCGGCACCTGA

Upstream 100 bases:

>100_bases
ACGGTGGTGACCGGCCAGATCAAGGCGATGCTCGCCGCGATCACCTCGGGTTCGTAACCCGGCACGCCGCCATTCTTTCA
GCCGCAAACGAGGAATTTCC

Downstream 100 bases:

>100_bases
GTGCCGTGTCGTGAACCGGGGCGTGCTGGTGCGGCCCGTGGTTCACCCCGCGACCGATTCCCAACCCGACCCAGCGTATC
CGCGAACTCGCGAAAGGCAA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MPSLMNIFDVAGSAMSAESQRLNVTASNLANADSVTGPDGKPYRAKQVVFETQPLGGARTRSGQGVGGVQVKQVIDDPSP
MKTSYDPSNPTADANGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTLTIGT

Sequences:

>Translated_141_residues
MPSLMNIFDVAGSAMSAESQRLNVTASNLANADSVTGPDGKPYRAKQVVFETQPLGGARTRSGQGVGGVQVKQVIDDPSP
MKTSYDPSNPTADANGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTLTIGT
>Mature_140_residues
PSLMNIFDVAGSAMSAESQRLNVTASNLANADSVTGPDGKPYRAKQVVFETQPLGGARTRSGQGVGGVQVKQVIDDPSPM
KTSYDPSNPTADANGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTLTIGT

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=138, Percent_Identity=66.6666666666667, Blast_Score=182, Evalue=8e-48,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14892; Mature: 14761

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLMNIFDVAGSAMSAESQRLNVTASNLANADSVTGPDGKPYRAKQVVFETQPLGGART
CCCHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
RSGQGVGGVQVKQVIDDPSPMKTSYDPSNPTADANGYVTLPNVDPVQEMVNMISASRSYQ
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCC
ANVETLNTAKQLMLKTLTIGT
CCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSLMNIFDVAGSAMSAESQRLNVTASNLANADSVTGPDGKPYRAKQVVFETQPLGGART
CCHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
RSGQGVGGVQVKQVIDDPSPMKTSYDPSNPTADANGYVTLPNVDPVQEMVNMISASRSYQ
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCC
ANVETLNTAKQLMLKTLTIGT
CCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA