| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028817
Identifier: 238028817
GI number: 238028817
Start: 3735902
End: 3736282
Strand: Direct
Name: 238028817
Synonym: bglu_1g32820
Alternate gene names: NA
Gene position: 3735902-3736282 (Clockwise)
Preceding gene: 238028816
Following gene: 238028821
Centisome position: 95.63
GC content: 73.23
Gene sequence:
>381_bases TTGCCGCCGTTCACCGTGGCGCGCGCCTTCTTCATCAGCGTCATCACGAACGGCAGGCACGGCACGCCGATCTGCGCATC GCGCGCGCTCCGCGAACAGGACGTGGAGATGGCGGTGCGCTTCGAAATGCTGACGGGGCTGGTGGCGATGGGCACGCGCG GCGACATGCAGGACGCGCAGCAGGCCTGGCGGCAGCGCCGCGCGGCATGCGGCGCCTCGCGCACCTGTCTCGCGGCCGCC TATCGCGACCGCATCGCCGCGCTCGAGCCGCAAGACCAGCAGCTGAAAAGCCGCGGGCCGTTCCGAAGCGGGCACGGCGC GGCCGTGCCTCCCGCGCTCAGTCCGAGGCCGGTGCCAGCCGCCGCAGCTCGTCGGCGGTGA
Upstream 100 bases:
>100_bases CGGTGCCCACCCGAACCAACCGCGGCACGAATCCGGTGCGCGCCATGCATGACGCCGGTTGCACGGGCCATGGCTCCCGC TCGCGCCCGTTCAGACCCGG
Downstream 100 bases:
>100_bases ACGGCCGCGAGCGCGTGACGAAGCGCCAGCCGGTCGGCCCCTCCAGCGAGAACATGCCGGCCTTGCCGGGCACCGCGTCG ACGATCAGCTGCAGGTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MPPFTVARAFFISVITNGRHGTPICASRALREQDVEMAVRFEMLTGLVAMGTRGDMQDAQQAWRQRRAACGASRTCLAAA YRDRIAALEPQDQQLKSRGPFRSGHGAAVPPALSPRPVPAAAARRR
Sequences:
>Translated_126_residues MPPFTVARAFFISVITNGRHGTPICASRALREQDVEMAVRFEMLTGLVAMGTRGDMQDAQQAWRQRRAACGASRTCLAAA YRDRIAALEPQDQQLKSRGPFRSGHGAAVPPALSPRPVPAAAARRR >Mature_125_residues PPFTVARAFFISVITNGRHGTPICASRALREQDVEMAVRFEMLTGLVAMGTRGDMQDAQQAWRQRRAACGASRTCLAAAY RDRIAALEPQDQQLKSRGPFRSGHGAAVPPALSPRPVPAAAARRR
Specific function: Unknown
COG id: COG4461
COG function: function code S; Uncharacterized protein conserved in bacteria, putative lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13701; Mature: 13570
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPFTVARAFFISVITNGRHGTPICASRALREQDVEMAVRFEMLTGLVAMGTRGDMQDAQ CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH QAWRQRRAACGASRTCLAAAYRDRIAALEPQDQQLKSRGPFRSGHGAAVPPALSPRPVPA HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC AAARRR CCCCCC >Mature Secondary Structure PPFTVARAFFISVITNGRHGTPICASRALREQDVEMAVRFEMLTGLVAMGTRGDMQDAQ CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH QAWRQRRAACGASRTCLAAAYRDRIAALEPQDQQLKSRGPFRSGHGAAVPPALSPRPVPA HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC AAARRR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA