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The map label for this gene is ylaB [C]

Identifier: 238028804

GI number: 238028804

Start: 3719959

End: 3721806

Strand: Direct

Name: ylaB [C]

Synonym: bglu_1g32680

Alternate gene names: 238028804

Gene position: 3719959-3721806 (Clockwise)

Preceding gene: 238028803

Following gene: 238028805

Centisome position: 95.22

GC content: 72.24

Gene sequence:

>1848_bases
ATGCCCCCGCCCGCCGCTATCGCCGTCGCCGAAACGACCCGCGTCGCCGACCTGCTCGCCGCGGGCGCGCTGAGCGCGCA
ATTCCAGCCGATCGTCGAGATCGCCGGGGGCGCCATCGTCGGCTACGAAGGCCTGGTGCGCGGCCCGCGCGGCTCGGCCG
TCGAGATGCCGGCGGCCCTGTTCGCCCAGGCCGGCCGGGAAGGCTGCTCGCTCGAGCTCGAACTCGCCGCGGCGGCCACC
TGCGTCGAGGCGTTCGCGAAATCGGGCGCCGACGGCCAGCTGTTCGTGAACTTCAGCGCGCACGCGATCGTGCAGCTCGC
GCGGCAGCGCGCACGCGTGCTCGGCGCGCTGCCGGCCGGGCGCATCGTGGTCGAGCTCACCGAGCAGCACCCGGCCAGCG
ACCTGCTCGGCCTGCCCTCGGCGCTGGCCGAACTGCGCGGCTCGGGCGTCTCGTTCGCGCTCGACGACTACGGCACCGCC
AACGCCAACATGAGTTCGTGGGTGCGCCTGCGGCCCGACATCGTCAAGATCGACCGCTTCTTCATCGACGGCATCGCCAG
CGACCCGCGCAAGTTCGAGGCGGTCAAGGCGATGCAGCAGTTCGCGGCGGCCACCGGCGGCCGGCTGATCGCGGAAGGCA
TCGAATGCGCGGCGGACCTGATCGTGGTGCGCGACCTCGGCATCGACTGCGGGCAGGGCTTCTTTCTCGGCCGGCCGGCG
CCGGTGCCGGCGCCGCGCGCGGCGGCCGCGGCCCACGACGCGCTGCTCGCGCAGCACATCGCGGTGTTTCCGGGCCTGCC
GCGCACCAGCACGCTGACCCGGCCGAACGCGACGATGGCCGAGAAGATGCGCGTGCCGGCGCCGGCGCTGCCGAGCCACG
CCACCAACAATCAGGTGCTCGAACTGTTCCAGCGGCGCCCCGACCTGCATGCGGTGGCGGTGGTGGAGGGCGAGCGGCCG
ATCGCGCTGATCAACCGGCGCGGCTTCATGGACCGCTACGCGCGGCCCTACCATCGCGAGGTGTTCGGCAAGCGGCCGTG
CCTGCAGTTGGCCAACAACGCGCCGCTGATCGTCGACAACGCCACCACCGCGGAACAGCTGACCTCGCTGCTCGCGAGCC
ACGACCAGCGCTATCTGACCGAGGGCTTCATCATCACCGACCACGGCCGCTACACGGGGCTCGGCACCGGCGAGAGCCTG
GTGCGCGCCGTCACCGAGGTGCGGGTCGAGGCCGCGCGCTACGCCAATCCGCTCACGTTCCTGCCCGGCAACATCCCGAT
CAGTTCGCACATCGCGCGGCTGGTGGGCAAGGACGCGGCGTTCCATGCCTGCTACGTCGATCTGAACCAGTTCAAGCCGT
TCAACGACCAGTACGGCTACTGGCAGGGCGACGAGGTGCTGAAGTTCGCCGCCTCGGTGCTGGCCGACGCGTGCGACCCG
ACCCGCGACTTCCTCGGCCACGTCGGCGGCGACGATTTTCTCGTGCTGTTCCAGAGCGAAGACTGGGAAGCGCGCGCGCA
GCGCGCGATCGGCCGCTTCGACGAGGGCGCCCAGCGCTTCTACGCGCATGCGGACCGGCTCGCGGGCGGCATCCGCGGCG
AGGACCGGCGCGGCAATCCGGCGTTCTTCGGCTTCGTGACGATGGCGATCGGCTGCGTGAGCGTGCCCGGCACGCGCCGC
TACCGCAGCGACGAGATCGCCTCGGTGGCCGCGCTCGCCAAGCGGCGCGCGAAGCAGCGGCCGGGTCACCTGTACCTGAT
CGACGTGGAGGAAGGCCGCGCCTGGCTGCGCGCCCACGGCGAGCAGCCGCACCTGCCCGACGGCGGCGGCGCGGCACGCC
AACCCTGA

Upstream 100 bases:

>100_bases
CGGTCGGGCCCGATGTGCGCGGCTCACGTCACAAAAAATTCACTGCGGCCGGACCCACGCCGATTGTTAAATAGTGTGTC
CCGTCGTCTGCTCGCCCGTC

Downstream 100 bases:

>100_bases
GCGGCGGGCGAGCCGCGCGGCGCCGCCGCCACGCAGCGAGCCGGCAGGCGCGCGCCGGCACCCCGCCCCCCTTTCGGGCC
TGGTCCGGCCGCGCCCGGGC

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 614

Protein sequence:

>615_residues
MPPPAAIAVAETTRVADLLAAGALSAQFQPIVEIAGGAIVGYEGLVRGPRGSAVEMPAALFAQAGREGCSLELELAAAAT
CVEAFAKSGADGQLFVNFSAHAIVQLARQRARVLGALPAGRIVVELTEQHPASDLLGLPSALAELRGSGVSFALDDYGTA
NANMSSWVRLRPDIVKIDRFFIDGIASDPRKFEAVKAMQQFAAATGGRLIAEGIECAADLIVVRDLGIDCGQGFFLGRPA
PVPAPRAAAAAHDALLAQHIAVFPGLPRTSTLTRPNATMAEKMRVPAPALPSHATNNQVLELFQRRPDLHAVAVVEGERP
IALINRRGFMDRYARPYHREVFGKRPCLQLANNAPLIVDNATTAEQLTSLLASHDQRYLTEGFIITDHGRYTGLGTGESL
VRAVTEVRVEAARYANPLTFLPGNIPISSHIARLVGKDAAFHACYVDLNQFKPFNDQYGYWQGDEVLKFAASVLADACDP
TRDFLGHVGGDDFLVLFQSEDWEARAQRAIGRFDEGAQRFYAHADRLAGGIRGEDRRGNPAFFGFVTMAIGCVSVPGTRR
YRSDEIASVAALAKRRAKQRPGHLYLIDVEEGRAWLRAHGEQPHLPDGGGAARQP

Sequences:

>Translated_615_residues
MPPPAAIAVAETTRVADLLAAGALSAQFQPIVEIAGGAIVGYEGLVRGPRGSAVEMPAALFAQAGREGCSLELELAAAAT
CVEAFAKSGADGQLFVNFSAHAIVQLARQRARVLGALPAGRIVVELTEQHPASDLLGLPSALAELRGSGVSFALDDYGTA
NANMSSWVRLRPDIVKIDRFFIDGIASDPRKFEAVKAMQQFAAATGGRLIAEGIECAADLIVVRDLGIDCGQGFFLGRPA
PVPAPRAAAAAHDALLAQHIAVFPGLPRTSTLTRPNATMAEKMRVPAPALPSHATNNQVLELFQRRPDLHAVAVVEGERP
IALINRRGFMDRYARPYHREVFGKRPCLQLANNAPLIVDNATTAEQLTSLLASHDQRYLTEGFIITDHGRYTGLGTGESL
VRAVTEVRVEAARYANPLTFLPGNIPISSHIARLVGKDAAFHACYVDLNQFKPFNDQYGYWQGDEVLKFAASVLADACDP
TRDFLGHVGGDDFLVLFQSEDWEARAQRAIGRFDEGAQRFYAHADRLAGGIRGEDRRGNPAFFGFVTMAIGCVSVPGTRR
YRSDEIASVAALAKRRAKQRPGHLYLIDVEEGRAWLRAHGEQPHLPDGGGAARQP
>Mature_614_residues
PPPAAIAVAETTRVADLLAAGALSAQFQPIVEIAGGAIVGYEGLVRGPRGSAVEMPAALFAQAGREGCSLELELAAAATC
VEAFAKSGADGQLFVNFSAHAIVQLARQRARVLGALPAGRIVVELTEQHPASDLLGLPSALAELRGSGVSFALDDYGTAN
ANMSSWVRLRPDIVKIDRFFIDGIASDPRKFEAVKAMQQFAAATGGRLIAEGIECAADLIVVRDLGIDCGQGFFLGRPAP
VPAPRAAAAAHDALLAQHIAVFPGLPRTSTLTRPNATMAEKMRVPAPALPSHATNNQVLELFQRRPDLHAVAVVEGERPI
ALINRRGFMDRYARPYHREVFGKRPCLQLANNAPLIVDNATTAEQLTSLLASHDQRYLTEGFIITDHGRYTGLGTGESLV
RAVTEVRVEAARYANPLTFLPGNIPISSHIARLVGKDAAFHACYVDLNQFKPFNDQYGYWQGDEVLKFAASVLADACDPT
RDFLGHVGGDDFLVLFQSEDWEARAQRAIGRFDEGAQRFYAHADRLAGGIRGEDRRGNPAFFGFVTMAIGCVSVPGTRRY
RSDEIASVAALAKRRAKQRPGHLYLIDVEEGRAWLRAHGEQPHLPDGGGAARQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI87081743, Length=240, Percent_Identity=27.0833333333333, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1790496, Length=232, Percent_Identity=25.4310344827586, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI226510982, Length=254, Percent_Identity=26.7716535433071, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI87082096, Length=121, Percent_Identity=29.7520661157025, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1788849, Length=244, Percent_Identity=25.4098360655738, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081980, Length=130, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1788502, Length=230, Percent_Identity=25.2173913043478, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI87081845, Length=232, Percent_Identity=26.7241379310345, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003018
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00563 EAL; PF01590 GAF; PF00990 GGDEF; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 66097; Mature: 65966

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPPAAIAVAETTRVADLLAAGALSAQFQPIVEIAGGAIVGYEGLVRGPRGSAVEMPAAL
CCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEECCHHHEECCCCCCCHHHHHH
FAQAGREGCSLELELAAAATCVEAFAKSGADGQLFVNFSAHAIVQLARQRARVLGALPAG
HHHCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCC
RIVVELTEQHPASDLLGLPSALAELRGSGVSFALDDYGTANANMSSWVRLRPDIVKIDRF
CEEEEECCCCCCHHHHCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHEEECCCHHHHHHH
FIDGIASDPRKFEAVKAMQQFAAATGGRLIAEGIECAADLIVVRDLGIDCGQGFFLGRPA
HHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCEECCCCC
PVPAPRAAAAAHDALLAQHIAVFPGLPRTSTLTRPNATMAEKMRVPAPALPSHATNNQVL
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHH
ELFQRRPDLHAVAVVEGERPIALINRRGFMDRYARPYHREVFGKRPCLQLANNAPLIVDN
HHHHHCCCCEEEEEEECCCCEEEEECCCCHHHHCCHHHHHHHCCCCHHHHCCCCCEEEEC
ATTAEQLTSLLASHDQRYLTEGFIITDHGRYTGLGTGESLVRAVTEVRVEAARYANPLTF
CCCHHHHHHHHHHCCHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
LPGNIPISSHIARLVGKDAAFHACYVDLNQFKPFNDQYGYWQGDEVLKFAASVLADACDP
CCCCCCHHHHHHHHHCCCCHHEEEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
TRDFLGHVGGDDFLVLFQSEDWEARAQRAIGRFDEGAQRFYAHADRLAGGIRGEDRRGNP
HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
AFFGFVTMAIGCVSVPGTRRYRSDEIASVAALAKRRAKQRPGHLYLIDVEEGRAWLRAHG
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCC
EQPHLPDGGGAARQP
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
PPPAAIAVAETTRVADLLAAGALSAQFQPIVEIAGGAIVGYEGLVRGPRGSAVEMPAAL
CCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEECCHHHEECCCCCCCHHHHHH
FAQAGREGCSLELELAAAATCVEAFAKSGADGQLFVNFSAHAIVQLARQRARVLGALPAG
HHHCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCC
RIVVELTEQHPASDLLGLPSALAELRGSGVSFALDDYGTANANMSSWVRLRPDIVKIDRF
CEEEEECCCCCCHHHHCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHEEECCCHHHHHHH
FIDGIASDPRKFEAVKAMQQFAAATGGRLIAEGIECAADLIVVRDLGIDCGQGFFLGRPA
HHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCEECCCCC
PVPAPRAAAAAHDALLAQHIAVFPGLPRTSTLTRPNATMAEKMRVPAPALPSHATNNQVL
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHH
ELFQRRPDLHAVAVVEGERPIALINRRGFMDRYARPYHREVFGKRPCLQLANNAPLIVDN
HHHHHCCCCEEEEEEECCCCEEEEECCCCHHHHCCHHHHHHHCCCCHHHHCCCCCEEEEC
ATTAEQLTSLLASHDQRYLTEGFIITDHGRYTGLGTGESLVRAVTEVRVEAARYANPLTF
CCCHHHHHHHHHHCCHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
LPGNIPISSHIARLVGKDAAFHACYVDLNQFKPFNDQYGYWQGDEVLKFAASVLADACDP
CCCCCCHHHHHHHHHCCCCHHEEEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
TRDFLGHVGGDDFLVLFQSEDWEARAQRAIGRFDEGAQRFYAHADRLAGGIRGEDRRGNP
HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
AFFGFVTMAIGCVSVPGTRRYRSDEIASVAALAKRRAKQRPGHLYLIDVEEGRAWLRAHG
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCC
EQPHLPDGGGAARQP
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1661370 [H]