| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is tauC [H]
Identifier: 238028736
GI number: 238028736
Start: 3636544
End: 3637623
Strand: Reverse
Name: tauC [H]
Synonym: bglu_1g32000
Alternate gene names: 238028736
Gene position: 3637623-3636544 (Counterclockwise)
Preceding gene: 238028737
Following gene: 238028734
Centisome position: 93.12
GC content: 76.85
Gene sequence:
>1080_bases ATGAGCGGGCGCGAGGCGGGGACGCGCGACACGGCGTTCGATCTCTGGGCCGGCGGCGGGCCGGGGCTTGCCGGCGTGGA TCGGGCAGCCGCTGCGCCAGCCGATGCGGCGGCCGGGGCGGCCCTTTGTGGGGCGGCCGGGGCGGCGGCCGGGGCGGCGG CCGCCTTTGCCGCGAGCGCCGAGGCGGGCTCGCGCGAGCATGGCCTCGATCCGCCGCGCGCCGGGCCGGCCCGCGTGCGC CGCGGCGCGCCGCCGCCCGCACGGCGCACGGCGGCGCGCCGGCGCGTGCATCACGGCTCGCGGCGCCCCGGCGAGGGGCC GACGGCGGCGCTCAGCGCGGCGTCGGTGGCCGGACTCGCGCTGCTCTGGTGGGGCGCGACACACTTCGGCTGGGTGCCGC CGCTGTTCCTGCCGGCGCCGGCCGCGGTCTGGCGCGCGTTCGTCGAGGCGTGGCACGGCAAGCTGCAGGGCGGCGTGCCG CTTGCCGTGCAGCTCGGCTGGAGCGCATTGCGCGTGTTCAGTGCGTTCGCGCTGGCCGCGCTGATCGGCATTCCGGTCGG CCTCCTGATGGGCGTGAGCCGCGTCGCGCGCGGGCTGCTCGATCCGCCGCTGGAGTTCTACCGGCCCTTGCCGCCGCTTG CCTATCTGCCGCTGGTGGTGATCTGGTTCGGCATCGACGAGACTGCCAAGATCGTGGTGATCTTCCTGGCCTGCTTCGCG CCGATCGCGATGGCCGCGCGCGCCGGGGCGCGCGGCGCGACGCGCGAGCAGATCGCCGCGGCCTGGTCGCTCGGCGGCAG CGCCGCGCAGGTGGTGCGCCACGTGGTGCTGCCGGCCGCGCTGCCCGAGATCCTGACCGGGCTGCGGATCGCCATCGGCT TCGGCTGGACCACGCTGGTGGCCGCCGAGATGGTGGCCGCCACGGCCGGGCTCGGGCAGATGGTGCTCAACGCGTCGAGC TTCCTGCGCACCGACGTGGTGGTGATGGGCATCGTGCTGATCGGCCTGATCGCGTGGGGCTTCGATCTGGCGATGCGCGC GCTGGAGCGGCGCCTCGTGCCGTGGAAGGGGCGCGGGTAG
Upstream 100 bases:
>100_bases CCACGCGCGATGCGCGGGCCGTCAAGTCGGCGCCCGACTTCATCGCATGGCGCGAACGGCTGATCGGCCTGCTGCATCGG CGCGACGCGGCGGAGGCGGC
Downstream 100 bases:
>100_bases CGCCGGCCTCCGGCGCCGTGCCGCGCAAGCGCGTCGGATCGGCCGCGCGACCGGCCGCGGCCCTGACATCGCCCGGCCGC CGCGCGCGGCGGGCTGCGCC
Product: taurine ABC transporter inner membrane subunit
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSGREAGTRDTAFDLWAGGGPGLAGVDRAAAAPADAAAGAALCGAAGAAAGAAAAFAASAEAGSREHGLDPPRAGPARVR RGAPPPARRTAARRRVHHGSRRPGEGPTAALSAASVAGLALLWWGATHFGWVPPLFLPAPAAVWRAFVEAWHGKLQGGVP LAVQLGWSALRVFSAFALAALIGIPVGLLMGVSRVARGLLDPPLEFYRPLPPLAYLPLVVIWFGIDETAKIVVIFLACFA PIAMAARAGARGATREQIAAAWSLGGSAAQVVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVAATAGLGQMVLNASS FLRTDVVVMGIVLIGLIAWGFDLAMRALERRLVPWKGRG
Sequences:
>Translated_359_residues MSGREAGTRDTAFDLWAGGGPGLAGVDRAAAAPADAAAGAALCGAAGAAAGAAAAFAASAEAGSREHGLDPPRAGPARVR RGAPPPARRTAARRRVHHGSRRPGEGPTAALSAASVAGLALLWWGATHFGWVPPLFLPAPAAVWRAFVEAWHGKLQGGVP LAVQLGWSALRVFSAFALAALIGIPVGLLMGVSRVARGLLDPPLEFYRPLPPLAYLPLVVIWFGIDETAKIVVIFLACFA PIAMAARAGARGATREQIAAAWSLGGSAAQVVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVAATAGLGQMVLNASS FLRTDVVVMGIVLIGLIAWGFDLAMRALERRLVPWKGRG >Mature_358_residues SGREAGTRDTAFDLWAGGGPGLAGVDRAAAAPADAAAGAALCGAAGAAAGAAAAFAASAEAGSREHGLDPPRAGPARVRR GAPPPARRTAARRRVHHGSRRPGEGPTAALSAASVAGLALLWWGATHFGWVPPLFLPAPAAVWRAFVEAWHGKLQGGVPL AVQLGWSALRVFSAFALAALIGIPVGLLMGVSRVARGLLDPPLEFYRPLPPLAYLPLVVIWFGIDETAKIVVIFLACFAP IAMAARAGARGATREQIAAAWSLGGSAAQVVRHVVLPAALPEILTGLRIAIGFGWTTLVAAEMVAATAGLGQMVLNASSF LRTDVVVMGIVLIGLIAWGFDLAMRALERRLVPWKGRG
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=250, Percent_Identity=51.6, Blast_Score=216, Evalue=2e-57, Organism=Escherichia coli, GI87081802, Length=240, Percent_Identity=37.0833333333333, Blast_Score=131, Evalue=7e-32, Organism=Escherichia coli, GI1789033, Length=173, Percent_Identity=30.0578034682081, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 36849; Mature: 36718
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGREAGTRDTAFDLWAGGGPGLAGVDRAAAAPADAAAGAALCGAAGAAAGAAAAFAASA CCCCCCCCCCCHHEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EAGSREHGLDPPRAGPARVRRGAPPPARRTAARRRVHHGSRRPGEGPTAALSAASVAGLA CCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH LLWWGATHFGWVPPLFLPAPAAVWRAFVEAWHGKLQGGVPLAVQLGWSALRVFSAFALAA HHHHCCHHCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH LIGIPVGLLMGVSRVARGLLDPPLEFYRPLPPLAYLPLVVIWFGIDETAKIVVIFLACFA HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH PIAMAARAGARGATREQIAAAWSLGGSAAQVVRHVVLPAALPEILTGLRIAIGFGWTTLV HHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AAEMVAATAGLGQMVLNASSFLRTDVVVMGIVLIGLIAWGFDLAMRALERRLVPWKGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SGREAGTRDTAFDLWAGGGPGLAGVDRAAAAPADAAAGAALCGAAGAAAGAAAAFAASA CCCCCCCCCCHHEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EAGSREHGLDPPRAGPARVRRGAPPPARRTAARRRVHHGSRRPGEGPTAALSAASVAGLA CCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH LLWWGATHFGWVPPLFLPAPAAVWRAFVEAWHGKLQGGVPLAVQLGWSALRVFSAFALAA HHHHCCHHCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH LIGIPVGLLMGVSRVARGLLDPPLEFYRPLPPLAYLPLVVIWFGIDETAKIVVIFLACFA HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH PIAMAARAGARGATREQIAAAWSLGGSAAQVVRHVVLPAALPEILTGLRIAIGFGWTTLV HHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AAEMVAATAGLGQMVLNASSFLRTDVVVMGIVLIGLIAWGFDLAMRALERRLVPWKGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]