| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is gntX [H]
Identifier: 238028708
GI number: 238028708
Start: 3605244
End: 3606068
Strand: Direct
Name: gntX [H]
Synonym: bglu_1g31720
Alternate gene names: 238028708
Gene position: 3605244-3606068 (Clockwise)
Preceding gene: 238028699
Following gene: 238028709
Centisome position: 92.29
GC content: 73.94
Gene sequence:
>825_bases ATGTCGATCGCCTGTGTATTGCGTCGCAACAGCCGGATCGCATGCTGCACAGCGGGATGGCGGGAGCTGTTCGCACGCGT TGCCGCGCTGGCGCTGCCCGGGCTTTGCGTGCTGTGCGGCAACGCTTGCAACCGCTCGTGCAACAACATGTGCGGCAATT CGCCACGCAACATAGTGTGCCGCGCATGCGACGAGGCGTACTGGAATGAAGCGCGGCTGCGCTGCGCGCAATGCGCGCTG CCGCTGTCCGCGTGGCGCGCGCGGCACGCGCATTCGACCGGCTATCGCTGCGGCGCGTGCCGCCGCGCGCCGCCGCCGTT CGACGCGACGTTCGCGCTGGCCGATTACCGGCCGCCGCTCGCAAGCCTGGTGCTGGACCTGAAGTTCGGTGCGCGGCTCG CGCTGGGCAGGCTGTTCGCCGAGCGGCTCGCGCGCGCGGTTCGGGAGCGGCCGGCGGCCGACGCCGAGCGGCCCGACCTG ATCGCGCCGGTGCCGCTCGCGCGGCGCCGGCTGGTCGAGCGCGGCTACAACCAGGCCTGGGCGATCGCGCGGCCGCTCGC GCGCGCGCTCGAGGTGCGCGCCGAGCCGGCGCTGCTGGTGCGCACGGTCCATACCGCGCCGCAGACGCGGCTCGACGCGG CGGCGCGGCGCGAGAACGTGGCGCACGCGTTCGCCGTGACGGGCGACGTCTGCGGGCTGCACGTCGGACTCGTCGACGAC GTGATGACCTCCGGCGCGACGCTCGCGGCGCTCGCCGTGCTGCTCAAGCGCGCGGGCGCGCGGCGCGTGACCAACTACGT CGCGCTGCGCACCTCGCGCGATTGA
Upstream 100 bases:
>100_bases ATGAGGGAACGGGAGACATGTCGGGCAAACTGGCGAAGTGCCCGAAGTATACTCGCTCGCCTCGCGGGCTTCAGCGCGGG CGGCACTCGCGGAGAAACTG
Downstream 100 bases:
>100_bases CACGCCCGGCCGGAAACTGCGATCGCGCTCGCAAGGCCGGGACCAAGGCAACATCGGGACAGCATCAAGGCAGCATCGAA GACGGCGGGAGCCCGGCCGC
Product: phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSIACVLRRNSRIACCTAGWRELFARVAALALPGLCVLCGNACNRSCNNMCGNSPRNIVCRACDEAYWNEARLRCAQCAL PLSAWRARHAHSTGYRCGACRRAPPPFDATFALADYRPPLASLVLDLKFGARLALGRLFAERLARAVRERPAADAERPDL IAPVPLARRRLVERGYNQAWAIARPLARALEVRAEPALLVRTVHTAPQTRLDAAARRENVAHAFAVTGDVCGLHVGLVDD VMTSGATLAALAVLLKRAGARRVTNYVALRTSRD
Sequences:
>Translated_274_residues MSIACVLRRNSRIACCTAGWRELFARVAALALPGLCVLCGNACNRSCNNMCGNSPRNIVCRACDEAYWNEARLRCAQCAL PLSAWRARHAHSTGYRCGACRRAPPPFDATFALADYRPPLASLVLDLKFGARLALGRLFAERLARAVRERPAADAERPDL IAPVPLARRRLVERGYNQAWAIARPLARALEVRAEPALLVRTVHTAPQTRLDAAARRENVAHAFAVTGDVCGLHVGLVDD VMTSGATLAALAVLLKRAGARRVTNYVALRTSRD >Mature_273_residues SIACVLRRNSRIACCTAGWRELFARVAALALPGLCVLCGNACNRSCNNMCGNSPRNIVCRACDEAYWNEARLRCAQCALP LSAWRARHAHSTGYRCGACRRAPPPFDATFALADYRPPLASLVLDLKFGARLALGRLFAERLARAVRERPAADAERPDLI APVPLARRRLVERGYNQAWAIARPLARALEVRAEPALLVRTVHTAPQTRLDAAARRENVAHAFAVTGDVCGLHVGLVDDV MTSGATLAALAVLLKRAGARRVTNYVALRTSRD
Specific function: Could be involved in gluconate metabolism [H]
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComF/GntX family [H]
Homologues:
Organism=Escherichia coli, GI87082263, Length=243, Percent_Identity=35.8024691358025, Blast_Score=116, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005222 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 29834; Mature: 29703
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIACVLRRNSRIACCTAGWRELFARVAALALPGLCVLCGNACNRSCNNMCGNSPRNIVC CCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHCHHHCHHHHHHCCCCCHHHHH RACDEAYWNEARLRCAQCALPLSAWRARHAHSTGYRCGACRRAPPPFDATFALADYRPPL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCH ASLVLDLKFGARLALGRLFAERLARAVRERPAADAERPDLIAPVPLARRRLVERGYNQAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHH AIARPLARALEVRAEPALLVRTVHTAPQTRLDAAARRENVAHAFAVTGDVCGLHVGLVDD HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VMTSGATLAALAVLLKRAGARRVTNYVALRTSRD HHHCCHHHHHHHHHHHHCCHHHHHHHHEEEECCC >Mature Secondary Structure SIACVLRRNSRIACCTAGWRELFARVAALALPGLCVLCGNACNRSCNNMCGNSPRNIVC CEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHCHHHCHHHHHHCCCCCHHHHH RACDEAYWNEARLRCAQCALPLSAWRARHAHSTGYRCGACRRAPPPFDATFALADYRPPL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCH ASLVLDLKFGARLALGRLFAERLARAVRERPAADAERPDLIAPVPLARRRLVERGYNQAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHH AIARPLARALEVRAEPALLVRTVHTAPQTRLDAAARRENVAHAFAVTGDVCGLHVGLVDD HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VMTSGATLAALAVLLKRAGARRVTNYVALRTSRD HHHCCHHHHHHHHHHHHCCHHHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]