| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ctaG [H]
Identifier: 238028702
GI number: 238028702
Start: 3599299
End: 3599880
Strand: Reverse
Name: ctaG [H]
Synonym: bglu_1g31660
Alternate gene names: 238028702
Gene position: 3599880-3599299 (Counterclockwise)
Preceding gene: 238028703
Following gene: 238028701
Centisome position: 92.15
GC content: 66.84
Gene sequence:
>582_bases ATGTCGGAACCGGTCGTCGACGCTGATTCCAGCTTCAATCGCACGATGCTGCTGAAGCTCGCGGTGGTCGCGGCGCTGAT GTTTGGCTTCGGGTTCGCGCTGGTGCCGATCTACCGCGCGATCTGCCAGGTGACGGGCCTCAACAATCTCGTGCAGCGCG ACGTCAGCGCGCGCGAGGCGCGCAACACCCAGGTGGACGCGAGCCGCACGATCTCGGTGGAGCTCGACGCGAACGCGCGC GGCCCGCTCGGCTTCCGGCCCGAGCAGCGCAGCCTCGACGTGCATCCGGGCGAGGTGATGACGGTGGTCTACGAGGTGAC CAACGCGCAGGACCGTCAGGTGGTCGCGCAGGCGATCCCGAGCTACGCGCCGAAGCAGGCCACCGAGTATTTCAAGAAGA TCGAGTGTTTCTGTTTCACGCAGCAGACGCTGAAGCCGAACGAATCGCGCCGCATGCCGGTGGTGTTCGTGGTGGACCGG GCGCTGCCGAAGGACGTGAAGACGATCACGCTGTCCTATACGTTCTTCGAGCTGAGCCCGCCGGCAGCGGCGGCGGGCCC GGGCTCGAAGCGCGGCGCGTGA
Upstream 100 bases:
>100_bases GCCGTGGTCGCCGCCTTTTTCATTGCCGCCGTCGTCAATCAATGGATCGCTTCCACTTCATGACGCCGGCATGAACGCCT AACGGAGAGGATTCCTCATC
Downstream 100 bases:
>100_bases GCGGGCGGCAACCAAGGCAGCGCCGGGGAGGCGACGATGACGCAAGGCTCGTTCGGCAAGACGCTCAAGGCCGTGTTCTG GTCGTTCTTCGGCGTGCGCA
Product: cytochrome C oxidase assembly protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSEPVVDADSSFNRTMLLKLAVVAALMFGFGFALVPIYRAICQVTGLNNLVQRDVSAREARNTQVDASRTISVELDANAR GPLGFRPEQRSLDVHPGEVMTVVYEVTNAQDRQVVAQAIPSYAPKQATEYFKKIECFCFTQQTLKPNESRRMPVVFVVDR ALPKDVKTITLSYTFFELSPPAAAAGPGSKRGA
Sequences:
>Translated_193_residues MSEPVVDADSSFNRTMLLKLAVVAALMFGFGFALVPIYRAICQVTGLNNLVQRDVSAREARNTQVDASRTISVELDANAR GPLGFRPEQRSLDVHPGEVMTVVYEVTNAQDRQVVAQAIPSYAPKQATEYFKKIECFCFTQQTLKPNESRRMPVVFVVDR ALPKDVKTITLSYTFFELSPPAAAAGPGSKRGA >Mature_192_residues SEPVVDADSSFNRTMLLKLAVVAALMFGFGFALVPIYRAICQVTGLNNLVQRDVSAREARNTQVDASRTISVELDANARG PLGFRPEQRSLDVHPGEVMTVVYEVTNAQDRQVVAQAIPSYAPKQATEYFKKIECFCFTQQTLKPNESRRMPVVFVVDRA LPKDVKTITLSYTFFELSPPAAAAGPGSKRGA
Specific function: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I [H]
COG id: COG3175
COG function: function code O; Cytochrome oxidase assembly factor
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the COX11/CtaG family [H]
Homologues:
Organism=Homo sapiens, GI4758034, Length=172, Percent_Identity=37.7906976744186, Blast_Score=116, Evalue=1e-26, Organism=Homo sapiens, GI242247057, Length=125, Percent_Identity=32.8, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI242247061, Length=125, Percent_Identity=32.8, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71990692, Length=182, Percent_Identity=33.5164835164835, Blast_Score=101, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6325125, Length=187, Percent_Identity=33.6898395721925, Blast_Score=108, Evalue=7e-25, Organism=Drosophila melanogaster, GI24581944, Length=171, Percent_Identity=30.9941520467836, Blast_Score=101, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007533 [H]
Pfam domain/function: PF04442 CtaG_Cox11 [H]
EC number: NA
Molecular weight: Translated: 21217; Mature: 21085
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPVVDADSSFNRTMLLKLAVVAALMFGFGFALVPIYRAICQVTGLNNLVQRDVSAREA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RNTQVDASRTISVELDANARGPLGFRPEQRSLDVHPGEVMTVVYEVTNAQDRQVVAQAIP CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCC SYAPKQATEYFKKIECFCFTQQTLKPNESRRMPVVFVVDRALPKDVKTITLSYTFFELSP CCCCHHHHHHHHHHHHHEEEHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEECC PAAAAGPGSKRGA CCCCCCCCCCCCC >Mature Secondary Structure SEPVVDADSSFNRTMLLKLAVVAALMFGFGFALVPIYRAICQVTGLNNLVQRDVSAREA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RNTQVDASRTISVELDANARGPLGFRPEQRSLDVHPGEVMTVVYEVTNAQDRQVVAQAIP CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCC SYAPKQATEYFKKIECFCFTQQTLKPNESRRMPVVFVVDRALPKDVKTITLSYTFFELSP CCCCHHHHHHHHHHHHHEEEHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEECC PAAAAGPGSKRGA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA