| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is imuB [H]
Identifier: 238028691
GI number: 238028691
Start: 3590226
End: 3591698
Strand: Reverse
Name: imuB [H]
Synonym: bglu_1g31550
Alternate gene names: 238028691
Gene position: 3591698-3590226 (Counterclockwise)
Preceding gene: 238028692
Following gene: 238028690
Centisome position: 91.94
GC content: 78.07
Gene sequence:
>1473_bases ATGCGCGTCTTGCTCGGCATCCATCTGCCGCGCCTGCCGCTCGACGTGTGCGCGTGCCCGTCTGAGCACGCGCCGGCCGC GGGCCGCGCCGTGCTCGAGCAGGGCGTGGTGCTGGTGGCCGACGCGGCCGCGCGCGCGCGCGGCGTGCGGCCCGGCATGA AGCGCGGCGGCGTGCTGACGCTCGCGCCCGACACGCATCTCGCCGAACGCGATCTCGCGCGCGAAGCCGATGCGCTGCGC GCGGTCGCGCTGGCGCTGCTGCGCTTCTCGCCCTCGGTCGCGCTCGACGAGGAGGCGACCCTGATCGTCGAGGTCGGCGC GAGCCTGCGGCTGTTCGGCGGGCTGCCCGCGCTGTGCCGGCAGGTGGGCGCCGCGCTGGCGGCGCTCGGCTACGCGGCGC GCCTCGGCACCGCGCCGACCGGCCGCGGCGCCTGGCTGCTCGCGCGGGCGCGCGGCGGCGCGCGCCGGCGCGTGGCGCGC GAGTCCAGCCTGCGGCGCGTGCTGGACGCGCTGCCCTGCGTGCTGCTGCCGGCCGCGCGGGCCTACGCGGGGTGGCTCGA CGGGCTCGGCTGCACGACGCTCGGCGGCCTGCGCCGGCTACCGCGCGCGGGGCTGCAGCGCCGCTGCGGAACCGTGCTGC TCGAAGCGCTCGATCGCGCCTACGGCGACCTGCCGGAGCCGTTCGCGTGGCTGCCGATCCCCCCCGAGTTCGACACCCGT CTCGAATTGCCGGAACGCGTCGAGCATGCGGAGGCGGTGCTGTTCGCGGCGCGCCGGCTGGTGGCGCAACTGGGCGGCTG GCTGGCCGCGCGGCAGCTCTCGCTCGTCGCGCTGCGCCTCGACCTCGAACACGAGCGCGGCCGCTGCGCGGTGCCGCCCA CCTCGGTCGAGCTCGCGTTCGCCGAGCCCACGCGCGACGAGCTGCATTGCCTGCGCGTGCTCGGCGAGCGGCTCGCGCGC GCCGAGCTGCCGGCCGCCGTGCTGGCGCTGCGGCTCGTCGCGACGCGCGTCGAGGCGGTCGCGCCGCCGAGCGCCGAGCT GTTCCCCGAGCCGGGCCGCACGCGCGAGGCACGGGCGCGGCTGGTCGAGCTGCTGCGCGCGCGGCTCGGCGCCGACAACG TGCTGTGCGCGGCGCCCGGCGCCGACCATCGGCCCGAGGCCGCCAACCGCTGGCTGCCGTCGCATGCGCCGGCGGGCCGC CCGTCCGAGGCGCCGGCCGTGGCGCCGCGCCCCGCGTGGCTGCTGGCCGAGCCGATCGCGCTCGCGATGCGCGAGAACCG GCCTTGCTACCGCACGCCGCTGCGCCTGATGTCGACGGCCGAGCGCGTCGAGGGCGGCTGGTTCGACGGCCAGCTCGTCC AGCGCGACTACTACGTCGCGCAGGACGACGACGGCGCCTGCTACTGGATCTACATGGATCGCGACCGGCGCGGCAGCGAG CCGCGCTGGTTCCTGCACGGCCTGTTCGGGTGA
Upstream 100 bases:
>100_bases CAGCCGTGCGGCGTGTCGGTCGAGATCGTCAAGCGCCGCGGGCCGGCCTGCGCGGCGCGGCTCGAACTCGCGTTGCCGTC GCCGATCGTGGAGGGTCGTT
Downstream 100 bases:
>100_bases CGCGATGGCGATGCCGTCGGCCCTGCCTGCCTACGCGGAGCTGTTCTGCCGCACGAATTTCTCGTTCCTGTGCGGCGCGT CCTCGGCCGACGAGCTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MRVLLGIHLPRLPLDVCACPSEHAPAAGRAVLEQGVVLVADAAARARGVRPGMKRGGVLTLAPDTHLAERDLAREADALR AVALALLRFSPSVALDEEATLIVEVGASLRLFGGLPALCRQVGAALAALGYAARLGTAPTGRGAWLLARARGGARRRVAR ESSLRRVLDALPCVLLPAARAYAGWLDGLGCTTLGGLRRLPRAGLQRRCGTVLLEALDRAYGDLPEPFAWLPIPPEFDTR LELPERVEHAEAVLFAARRLVAQLGGWLAARQLSLVALRLDLEHERGRCAVPPTSVELAFAEPTRDELHCLRVLGERLAR AELPAAVLALRLVATRVEAVAPPSAELFPEPGRTREARARLVELLRARLGADNVLCAAPGADHRPEAANRWLPSHAPAGR PSEAPAVAPRPAWLLAEPIALAMRENRPCYRTPLRLMSTAERVEGGWFDGQLVQRDYYVAQDDDGACYWIYMDRDRRGSE PRWFLHGLFG
Sequences:
>Translated_490_residues MRVLLGIHLPRLPLDVCACPSEHAPAAGRAVLEQGVVLVADAAARARGVRPGMKRGGVLTLAPDTHLAERDLAREADALR AVALALLRFSPSVALDEEATLIVEVGASLRLFGGLPALCRQVGAALAALGYAARLGTAPTGRGAWLLARARGGARRRVAR ESSLRRVLDALPCVLLPAARAYAGWLDGLGCTTLGGLRRLPRAGLQRRCGTVLLEALDRAYGDLPEPFAWLPIPPEFDTR LELPERVEHAEAVLFAARRLVAQLGGWLAARQLSLVALRLDLEHERGRCAVPPTSVELAFAEPTRDELHCLRVLGERLAR AELPAAVLALRLVATRVEAVAPPSAELFPEPGRTREARARLVELLRARLGADNVLCAAPGADHRPEAANRWLPSHAPAGR PSEAPAVAPRPAWLLAEPIALAMRENRPCYRTPLRLMSTAERVEGGWFDGQLVQRDYYVAQDDDGACYWIYMDRDRRGSE PRWFLHGLFG >Mature_490_residues MRVLLGIHLPRLPLDVCACPSEHAPAAGRAVLEQGVVLVADAAARARGVRPGMKRGGVLTLAPDTHLAERDLAREADALR AVALALLRFSPSVALDEEATLIVEVGASLRLFGGLPALCRQVGAALAALGYAARLGTAPTGRGAWLLARARGGARRRVAR ESSLRRVLDALPCVLLPAARAYAGWLDGLGCTTLGGLRRLPRAGLQRRCGTVLLEALDRAYGDLPEPFAWLPIPPEFDTR LELPERVEHAEAVLFAARRLVAQLGGWLAARQLSLVALRLDLEHERGRCAVPPTSVELAFAEPTRDELHCLRVLGERLAR AELPAAVLALRLVATRVEAVAPPSAELFPEPGRTREARARLVELLRARLGADNVLCAAPGADHRPEAANRWLPSHAPAGR PSEAPAVAPRPAWLLAEPIALAMRENRPCYRTPLRLMSTAERVEGGWFDGQLVQRDYYVAQDDDGACYWIYMDRDRRGSE PRWFLHGLFG
Specific function: Along with dnaE2 and imuA is required for the error- prone processing of DNA lesions [H]
COG id: COG0389
COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001126 [H]
Pfam domain/function: PF00817 IMS [H]
EC number: NA
Molecular weight: Translated: 53151; Mature: 53151
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLLGIHLPRLPLDVCACPSEHAPAAGRAVLEQGVVLVADAAARARGVRPGMKRGGVLT CEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHCCCEEEECCHHHHCCCCCCHHCCCEEE LAPDTHLAERDLAREADALRAVALALLRFSPSVALDEEATLIVEVGASLRLFGGLPALCR ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCCEECCCCHHHHH QVGAALAALGYAARLGTAPTGRGAWLLARARGGARRRVARESSLRRVLDALPCVLLPAAR HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AYAGWLDGLGCTTLGGLRRLPRAGLQRRCGTVLLEALDRAYGDLPEPFAWLPIPPEFDTR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCC LELPERVEHAEAVLFAARRLVAQLGGWLAARQLSLVALRLDLEHERGRCAVPPTSVELAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEE AEPTRDELHCLRVLGERLARAELPAAVLALRLVATRVEAVAPPSAELFPEPGRTREARAR CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHH LVELLRARLGADNVLCAAPGADHRPEAANRWLPSHAPAGRPSEAPAVAPRPAWLLAEPIA HHHHHHHHHCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH LAMRENRPCYRTPLRLMSTAERVEGGWFDGQLVQRDYYVAQDDDGACYWIYMDRDRRGSE HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEECCCCCEEEEEEECCCCCCC PRWFLHGLFG CCEECCCCCC >Mature Secondary Structure MRVLLGIHLPRLPLDVCACPSEHAPAAGRAVLEQGVVLVADAAARARGVRPGMKRGGVLT CEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHCCCEEEECCHHHHCCCCCCHHCCCEEE LAPDTHLAERDLAREADALRAVALALLRFSPSVALDEEATLIVEVGASLRLFGGLPALCR ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCCEECCCCHHHHH QVGAALAALGYAARLGTAPTGRGAWLLARARGGARRRVARESSLRRVLDALPCVLLPAAR HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AYAGWLDGLGCTTLGGLRRLPRAGLQRRCGTVLLEALDRAYGDLPEPFAWLPIPPEFDTR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCC LELPERVEHAEAVLFAARRLVAQLGGWLAARQLSLVALRLDLEHERGRCAVPPTSVELAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEE AEPTRDELHCLRVLGERLARAELPAAVLALRLVATRVEAVAPPSAELFPEPGRTREARAR CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHH LVELLRARLGADNVLCAAPGADHRPEAANRWLPSHAPAGRPSEAPAVAPRPAWLLAEPIA HHHHHHHHHCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH LAMRENRPCYRTPLRLMSTAERVEGGWFDGQLVQRDYYVAQDDDGACYWIYMDRDRRGSE HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEECCCCCEEEEEEECCCCCCC PRWFLHGLFG CCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA