Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028680

Identifier: 238028680

GI number: 238028680

Start: 3572954

End: 3573523

Strand: Reverse

Name: 238028680

Synonym: bglu_1g31440

Alternate gene names: NA

Gene position: 3573523-3572954 (Counterclockwise)

Preceding gene: 238028685

Following gene: 238028679

Centisome position: 91.48

GC content: 61.58

Gene sequence:

>570_bases
ATGCACAACAAGAAAAATCTCAGGGCGGGACGGTGGCTGGCCGGCGCGGCGCTGGCAGTGACGCTGTCGAGCGGATGCAA
TGCCGCGTTCGCCGATCGATGGGGGGTGCAGGTGGCAGGCGGCATCGCCGACCACGACATGAAGAAGGCGGAGCTCGGCA
TCGTCTGGGATCCGGGTTGGTCGTGGTGGCAGGTCGGCGATTGGCATTTCACGTTTGTCGCCGAAGGTCACGCGGCGTAT
TGGCATTATGGTGGAGACCACGCGGTCAATGCGAACATCGGTGAGTTCGGGGTCACGCCGGTGTTACGTTTCATCAAGCG
TAGCGGCGACGTGCGCCCGTTTCTCGAGGCCGGGGTCGGCGTGCGCCTGCTCACGCATCCGCACATCGCCGCCAACTACA
CGATGTCGACGGCCTTCCAGTTCGCCGACATGGTCGGGGTGGGCGCGCAGTTCGGCCACCGCCAGCAGTATCTGGCCGGC
TTCCGTTTCCAGCACGAGTCGAACGCGGGTATCAAAGATCCGAATCCTGGTATAAATTTCAGCCAAATCTATCTGCAGTA
CAACTTCTAA

Upstream 100 bases:

>100_bases
CCAATTAGAAAAATCCTTTACCATAAGATGCTTTCGTTTTTTGAGCCGGCCGCGACGATCGCGGCGGCGCTCCATTCAAC
CCCGGAATCTGGAGTGAAGG

Downstream 100 bases:

>100_bases
GCGGCACGCGCGGCGGGCGCGGGGCCTGGGAGTACGGTGATGGTGGCGAAGATGATCGATGCGATTCGCGAGCTCGAGCG
TGACCGGTTCCGCGCGATGG

Product: Lipid A 3-O-deacylase-like protein

Products: NA

Alternate protein names: Lipid A 3-O-Deacylase-Related Protein; Lipid A Deacylase Signal Peptide Protein; NAD-Dependent Aldehyde Dehydrogenase; Lipid A 3-O-Deacylase Superfamily; Lipoprotein

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MHNKKNLRAGRWLAGAALAVTLSSGCNAAFADRWGVQVAGGIADHDMKKAELGIVWDPGWSWWQVGDWHFTFVAEGHAAY
WHYGGDHAVNANIGEFGVTPVLRFIKRSGDVRPFLEAGVGVRLLTHPHIAANYTMSTAFQFADMVGVGAQFGHRQQYLAG
FRFQHESNAGIKDPNPGINFSQIYLQYNF

Sequences:

>Translated_189_residues
MHNKKNLRAGRWLAGAALAVTLSSGCNAAFADRWGVQVAGGIADHDMKKAELGIVWDPGWSWWQVGDWHFTFVAEGHAAY
WHYGGDHAVNANIGEFGVTPVLRFIKRSGDVRPFLEAGVGVRLLTHPHIAANYTMSTAFQFADMVGVGAQFGHRQQYLAG
FRFQHESNAGIKDPNPGINFSQIYLQYNF
>Mature_189_residues
MHNKKNLRAGRWLAGAALAVTLSSGCNAAFADRWGVQVAGGIADHDMKKAELGIVWDPGWSWWQVGDWHFTFVAEGHAAY
WHYGGDHAVNANIGEFGVTPVLRFIKRSGDVRPFLEAGVGVRLLTHPHIAANYTMSTAFQFADMVGVGAQFGHRQQYLAG
FRFQHESNAGIKDPNPGINFSQIYLQYNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20905; Mature: 20905

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNKKNLRAGRWLAGAALAVTLSSGCNAAFADRWGVQVAGGIADHDMKKAELGIVWDPGW
CCCCCCCCCCCEECCEEEEEEECCCCCEEECCCCCEEEECCCCCCCCCCEEEEEEECCCC
SWWQVGDWHFTFVAEGHAAYWHYGGDHAVNANIGEFGVTPVLRFIKRSGDVRPFLEAGVG
CEEEECCEEEEEEECCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHCCCCCHHHHCCCC
VRLLTHPHIAANYTMSTAFQFADMVGVGAQFGHRQQYLAGFRFQHESNAGIKDPNPGINF
EEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHCEEEEECCCCCCCCCCCCCCE
SQIYLQYNF
EEEEEEECC
>Mature Secondary Structure
MHNKKNLRAGRWLAGAALAVTLSSGCNAAFADRWGVQVAGGIADHDMKKAELGIVWDPGW
CCCCCCCCCCCEECCEEEEEEECCCCCEEECCCCCEEEECCCCCCCCCCEEEEEEECCCC
SWWQVGDWHFTFVAEGHAAYWHYGGDHAVNANIGEFGVTPVLRFIKRSGDVRPFLEAGVG
CEEEECCEEEEEEECCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHCCCCCHHHHCCCC
VRLLTHPHIAANYTMSTAFQFADMVGVGAQFGHRQQYLAGFRFQHESNAGIKDPNPGINF
EEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHCEEEEECCCCCCCCCCCCCCE
SQIYLQYNF
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA