| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is apt [H]
Identifier: 238028650
GI number: 238028650
Start: 3542614
End: 3543180
Strand: Reverse
Name: apt [H]
Synonym: bglu_1g31140
Alternate gene names: 238028650
Gene position: 3543180-3542614 (Counterclockwise)
Preceding gene: 238028651
Following gene: 238028649
Centisome position: 90.7
GC content: 68.43
Gene sequence:
>567_bases ATGAGCCATCAGCCGTCGGGCGTGTCGCCCGATCCCGCCGAGTTCGTCCGTCGCCATGTGCGCACGGTGCCGGACTGGCC GCAGCCGGGCGTGCAGTTCCGCGACATCACGCCGATCCTGCAGAACGCGAAGGCGCTGCGCGTGCTGGTCGATCTGCTGG TCGAGCGCTACGTCGACGCCAAGCTCGACTACGTGGCCGGGCTCGACGCGCGCGGCTTCATCATCGCGCCGATCGTCGCC TATGAGCTGAGCGTCGGCTTCATCCCGATCCGCAAGGTCGGCAAGCTGCCGTACAAGACACGGTCGGAATCCTATGAGCT CGAATACGGCAGCGCGACGGTGGAGATCCATGAGGACGCCTGCAAGCCCGGCGACCGCGTGATCATCGTCGACGACCTGA TCGCCACCGGCGGCACCATGATGGCCGGCAAGAACCTGCTGGAGCACCTCGGCGCGAGCGTCGTGGAAGGCGCGGCGATC ATCGACCTGCCCGACCTCGGCGGCTCGGCGCTGCTGCGCGGCGCGGGCCTGCCGCTCTACGCCGTCACCGAATTCGCGGG CCACTGA
Upstream 100 bases:
>100_bases CATGTCGAGCGGCGCGGCCCCCGCAGCCGGATATTGTTCGGACCCCATCAATTTCCGTCGGTCGCCACGGCCGACGCGCG CCGTTTTTTTGGAGAAGTTC
Downstream 100 bases:
>100_bases GCCGCTTGGCCGGTGGTGCCGGGCCGACCCCGGCGCGTGCCTGTTCCCCTCATCCTCTGCCAGCGAGCCGTTTAGCCATG CCGAGCTTCCTGCTGTTCCT
Product: adenine/guanine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT [H]
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSHQPSGVSPDPAEFVRRHVRTVPDWPQPGVQFRDITPILQNAKALRVLVDLLVERYVDAKLDYVAGLDARGFIIAPIVA YELSVGFIPIRKVGKLPYKTRSESYELEYGSATVEIHEDACKPGDRVIIVDDLIATGGTMMAGKNLLEHLGASVVEGAAI IDLPDLGGSALLRGAGLPLYAVTEFAGH
Sequences:
>Translated_188_residues MSHQPSGVSPDPAEFVRRHVRTVPDWPQPGVQFRDITPILQNAKALRVLVDLLVERYVDAKLDYVAGLDARGFIIAPIVA YELSVGFIPIRKVGKLPYKTRSESYELEYGSATVEIHEDACKPGDRVIIVDDLIATGGTMMAGKNLLEHLGASVVEGAAI IDLPDLGGSALLRGAGLPLYAVTEFAGH >Mature_187_residues SHQPSGVSPDPAEFVRRHVRTVPDWPQPGVQFRDITPILQNAKALRVLVDLLVERYVDAKLDYVAGLDARGFIIAPIVAY ELSVGFIPIRKVGKLPYKTRSESYELEYGSATVEIHEDACKPGDRVIIVDDLIATGGTMMAGKNLLEHLGASVVEGAAII DLPDLGGSALLRGAGLPLYAVTEFAGH
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4502171, Length=176, Percent_Identity=44.8863636363636, Blast_Score=152, Evalue=2e-37, Organism=Homo sapiens, GI71773201, Length=128, Percent_Identity=49.21875, Blast_Score=128, Evalue=3e-30, Organism=Escherichia coli, GI1786675, Length=175, Percent_Identity=48.5714285714286, Blast_Score=177, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17509087, Length=159, Percent_Identity=44.0251572327044, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6323619, Length=166, Percent_Identity=39.1566265060241, Blast_Score=114, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6320649, Length=179, Percent_Identity=32.9608938547486, Blast_Score=90, Evalue=2e-19, Organism=Drosophila melanogaster, GI17136334, Length=173, Percent_Identity=39.3063583815029, Blast_Score=124, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005764 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.7 [H]
Molecular weight: Translated: 20287; Mature: 20155
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHQPSGVSPDPAEFVRRHVRTVPDWPQPGVQFRDITPILQNAKALRVLVDLLVERYVDA CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH KLDYVAGLDARGFIIAPIVAYELSVGFIPIRKVGKLPYKTRSESYELEYGSATVEIHEDA HHHHHHCCCCCCEEEHHHHHHHHHCCCEEHHHHCCCCCCCCCCCEEEECCCEEEEEECCC CKPGDRVIIVDDLIATGGTMMAGKNLLEHLGASVVEGAAIIDLPDLGGSALLRGAGLPLY CCCCCEEEEEECHHHCCCCHHHHHHHHHHHCHHHHCCEEEEECCCCCCHHHHHCCCCCCE AVTEFAGH EHHHHCCC >Mature Secondary Structure SHQPSGVSPDPAEFVRRHVRTVPDWPQPGVQFRDITPILQNAKALRVLVDLLVERYVDA CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH KLDYVAGLDARGFIIAPIVAYELSVGFIPIRKVGKLPYKTRSESYELEYGSATVEIHEDA HHHHHHCCCCCCEEEHHHHHHHHHCCCEEHHHHCCCCCCCCCCCEEEECCCEEEEEECCC CKPGDRVIIVDDLIATGGTMMAGKNLLEHLGASVVEGAAIIDLPDLGGSALLRGAGLPLY CCCCCEEEEEECHHHCCCCHHHHHHHHHHHCHHHHCCEEEEECCCCCCHHHHHCCCCCCE AVTEFAGH EHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA