| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028618
Identifier: 238028618
GI number: 238028618
Start: 3503207
End: 3504253
Strand: Reverse
Name: 238028618
Synonym: bglu_1g30820
Alternate gene names: NA
Gene position: 3504253-3503207 (Counterclockwise)
Preceding gene: 238028619
Following gene: 238028617
Centisome position: 89.7
GC content: 71.16
Gene sequence:
>1047_bases ATGGAGATGTCCGAGTCCCGTGCGTTGAACAATGGCAGCAAGCAGCGGAGGCCGTGGGCACGACGGCTCGGCACGCTGTT CATGGTCGGCCTGCTCGCGGCGGGCACGCTCGCGTCGCTCGACGCCGAGGCGCGCCGCATGGGCGGCGGCCGCAGTGTCG GCCGCCAGTCGCAGATGGTGCAGCAGCGCCAGGCCACGCCGCCCGCCCAGCAGCCGATGCAGCAGGCCGCGCCGGCCCAG ATGCAGCGCGGCGCGCAGCCGGCCGCCCAGCCGAACCGCTCGCGCTGGCTCGGGCCGATCGCCGGTCTGGCCGCCGGCCT CGGCATCGCGGCGCTGTTGTCGCACTTCGGGCTCGGCGGCGCGTTCGCGGGCATGATGGCGAACCTGATCGTGATCGCGC TGCTCGCGTTTGCCGGCATCTGGCTGGTGCGCAAGCTGATGAACCGCGGCCGCCGGCAGGAGCCGGCCTATGCGGGTTCG GGCGCGTCGATGAACCGCGGCTACGATGGGGCGGCGAGCGGCGGCTACGCGGCGGGCAACGCGACGTATTCGTCGGCGCC GCAGCCCGCGTCGTCCAGCAACTACGCGAACGAAGCGGCCCGCGTGTTCGGCGGCGGCGCGGCGGCGGGCGCGGTAAACG ATGCGGTGGGCAGCGCAAGCGCGGTGCCGCAGGTGCCGGCCGGTTTCGACACCGAGGCGTTCGTGCGCAACGCGAAGGTC TATTTCGTCCGGCTGCAGGCTGCGTGGGACCAGGGCAACCTGGCCGATATCCGCGAATTCACCACGCCTGAAATGTTCGC CGAGGTGAAGATCGATCTCGATTCGCGCGGTGCGGGCAAGAATCAGACCGACGTCGTGCAGATCGATGCCGACCTGCTCG GCGTCGAGCAGCGCGGCAGCCTGTCCGAGGCGAGCGTGCGCTTCCACGGCATGATCCGCGAGAATCCGGGCGCGCCGGCC GAGCCGTTCGAGGAGGTCTGGAACCTGACCAAGTCGGGCAACGAGGGCTGGCTGCTGGCCGGTATCCAGCAGATCAACGC GCACTGA
Upstream 100 bases:
>100_bases TGCCGTCAAATATTACAATTTGTCAGGTGGCGTGGTAGCGTTACACCACGGAACCAAGTACTAAGGGGTTCTGTCCATAC AGTTACCTTTCATTTTGGAG
Downstream 100 bases:
>100_bases GCCGTGCGTCGGGCCCGGCGCCGCGGATAAATCGGCCGACGCCGCAGCGGGGCCGGACCGATCCGACGTTACAATAGGAA CCCGCGCAGGCACCCTGCCT
Product: import inner membrane translocase subunit Tim44
Products: NA
Alternate protein names: Transmembrane Protein; Tim44 Domain Protein; Hypothtical Protein; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Containing Protein
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MEMSESRALNNGSKQRRPWARRLGTLFMVGLLAAGTLASLDAEARRMGGGRSVGRQSQMVQQRQATPPAQQPMQQAAPAQ MQRGAQPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGGAFAGMMANLIVIALLAFAGIWLVRKLMNRGRRQEPAYAGS GASMNRGYDGAASGGYAAGNATYSSAPQPASSSNYANEAARVFGGGAAAGAVNDAVGSASAVPQVPAGFDTEAFVRNAKV YFVRLQAAWDQGNLADIREFTTPEMFAEVKIDLDSRGAGKNQTDVVQIDADLLGVEQRGSLSEASVRFHGMIRENPGAPA EPFEEVWNLTKSGNEGWLLAGIQQINAH
Sequences:
>Translated_348_residues MEMSESRALNNGSKQRRPWARRLGTLFMVGLLAAGTLASLDAEARRMGGGRSVGRQSQMVQQRQATPPAQQPMQQAAPAQ MQRGAQPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGGAFAGMMANLIVIALLAFAGIWLVRKLMNRGRRQEPAYAGS GASMNRGYDGAASGGYAAGNATYSSAPQPASSSNYANEAARVFGGGAAAGAVNDAVGSASAVPQVPAGFDTEAFVRNAKV YFVRLQAAWDQGNLADIREFTTPEMFAEVKIDLDSRGAGKNQTDVVQIDADLLGVEQRGSLSEASVRFHGMIRENPGAPA EPFEEVWNLTKSGNEGWLLAGIQQINAH >Mature_348_residues MEMSESRALNNGSKQRRPWARRLGTLFMVGLLAAGTLASLDAEARRMGGGRSVGRQSQMVQQRQATPPAQQPMQQAAPAQ MQRGAQPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGGAFAGMMANLIVIALLAFAGIWLVRKLMNRGRRQEPAYAGS GASMNRGYDGAASGGYAAGNATYSSAPQPASSSNYANEAARVFGGGAAAGAVNDAVGSASAVPQVPAGFDTEAFVRNAKV YFVRLQAAWDQGNLADIREFTTPEMFAEVKIDLDSRGAGKNQTDVVQIDADLLGVEQRGSLSEASVRFHGMIRENPGAPA EPFEEVWNLTKSGNEGWLLAGIQQINAH
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36583; Mature: 36583
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMSESRALNNGSKQRRPWARRLGTLFMVGLLAAGTLASLDAEARRMGGGRSVGRQSQMV CCCCHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH QQRQATPPAQQPMQQAAPAQMQRGAQPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGG HHHHCCCCHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH AFAGMMANLIVIALLAFAGIWLVRKLMNRGRRQEPAYAGSGASMNRGYDGAASGGYAAGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATYSSAPQPASSSNYANEAARVFGGGAAAGAVNDAVGSASAVPQVPAGFDTEAFVRNAKV CCCCCCCCCCCCCCHHHHHHHHHCCCHHHCHHHHHHCCCCCCCCCCCCCCHHHHHHCCEE YFVRLQAAWDQGNLADIREFTTPEMFAEVKIDLDSRGAGKNQTDVVQIDADLLGVEQRGS EEEEEEECCCCCCHHHHHHHCCHHHEEEEEEEECCCCCCCCCCEEEEECHHHHCCCCCCC LSEASVRFHGMIRENPGAPAEPFEEVWNLTKSGNEGWLLAGIQQINAH CCHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHCCC >Mature Secondary Structure MEMSESRALNNGSKQRRPWARRLGTLFMVGLLAAGTLASLDAEARRMGGGRSVGRQSQMV CCCCHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH QQRQATPPAQQPMQQAAPAQMQRGAQPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGG HHHHCCCCHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH AFAGMMANLIVIALLAFAGIWLVRKLMNRGRRQEPAYAGSGASMNRGYDGAASGGYAAGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATYSSAPQPASSSNYANEAARVFGGGAAAGAVNDAVGSASAVPQVPAGFDTEAFVRNAKV CCCCCCCCCCCCCCHHHHHHHHHCCCHHHCHHHHHHCCCCCCCCCCCCCCHHHHHHCCEE YFVRLQAAWDQGNLADIREFTTPEMFAEVKIDLDSRGAGKNQTDVVQIDADLLGVEQRGS EEEEEEECCCCCCHHHHHHHCCHHHEEEEEEEECCCCCCCCCCEEEEECHHHHCCCCCCC LSEASVRFHGMIRENPGAPAEPFEEVWNLTKSGNEGWLLAGIQQINAH CCHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA