| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028614
Identifier: 238028614
GI number: 238028614
Start: 3499762
End: 3500109
Strand: Reverse
Name: 238028614
Synonym: bglu_1g30780
Alternate gene names: NA
Gene position: 3500109-3499762 (Counterclockwise)
Preceding gene: 238028615
Following gene: 238028613
Centisome position: 89.6
GC content: 72.41
Gene sequence:
>348_bases ATGCCGATTTACGCCTATCGTTGCGATGCGTGCGGTTTCGCGAAGGACGTGCTCCAGAAGATCAGCGACGCGCCGCTGTC CGTTTGCCCCGAATGCGGGAAGGATGCCTTCCGCAAGCAGGTGACCGCCGCCGGATTTCAGTTGAAGGGATCGGGCTGGT ACGTGACCGATTTCCGGGGCGGCTCGGGCGGCAAGAGTGCGCCCGCTGCCGGCGCCGCGGACGGTGCAGGCAGCGAGGCC GCCAAGCCCGACGCGGCCGCGCCGGCTGCGGGTTCGCCGCCGGCCGCGCCGGCCGCCGGCGCGAGCACCGCTGCGCCTGC CGCGCCTGCCGCGCCGAGCGACACCTGA
Upstream 100 bases:
>100_bases AAAGCTGGCTCACCTGGCGCCGAAACGGCCGGAGTACGGCGAGCTTTCGGATATAATTCAAGGTTTTGCAAGACGTTTCT AGTTTCCGCGGGAAAAAAAC
Downstream 100 bases:
>100_bases TGACGATCCGGCGCCCGGACCGGGCGCCGGCGTTTACGTGCCGGGCACCGGCGCGGTTACCTCACGGCTGATGATGAAGA AGACGACCCTCAAAACGGTA
Product: FmdB family regulatory protein
Products: NA
Alternate protein names: FmdB Family Regulatory Protein; Type I Antifreeze Protein; Regulatory Protein; Regulatory Protein FmdB Family Protein; Regulatory Protein FmdB Family Domain-Containing; FmdB Transcriptional Regulator
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MPIYAYRCDACGFAKDVLQKISDAPLSVCPECGKDAFRKQVTAAGFQLKGSGWYVTDFRGGSGGKSAPAAGAADGAGSEA AKPDAAAPAAGSPPAAPAAGASTAAPAAPAAPSDT
Sequences:
>Translated_115_residues MPIYAYRCDACGFAKDVLQKISDAPLSVCPECGKDAFRKQVTAAGFQLKGSGWYVTDFRGGSGGKSAPAAGAADGAGSEA AKPDAAAPAAGSPPAAPAAGASTAAPAAPAAPSDT >Mature_114_residues PIYAYRCDACGFAKDVLQKISDAPLSVCPECGKDAFRKQVTAAGFQLKGSGWYVTDFRGGSGGKSAPAAGAADGAGSEAA KPDAAAPAAGSPPAAPAAGASTAAPAAPAAPSDT
Specific function: Unknown
COG id: COG2331
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11073; Mature: 10942
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIYAYRCDACGFAKDVLQKISDAPLSVCPECGKDAFRKQVTAAGFQLKGSGWYVTDFRG CCCEEEECCCCCHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHCCEEECCCCEEEEECCC GSGGKSAPAAGAADGAGSEAAKPDAAAPAAGSPPAAPAAGASTAAPAAPAAPSDT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PIYAYRCDACGFAKDVLQKISDAPLSVCPECGKDAFRKQVTAAGFQLKGSGWYVTDFRG CCEEEECCCCCHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHCCEEECCCCEEEEECCC GSGGKSAPAAGAADGAGSEAAKPDAAAPAAGSPPAAPAAGASTAAPAAPAAPSDT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA