| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028603
Identifier: 238028603
GI number: 238028603
Start: 3486064
End: 3486570
Strand: Reverse
Name: 238028603
Synonym: bglu_1g30670
Alternate gene names: NA
Gene position: 3486570-3486064 (Counterclockwise)
Preceding gene: 238028605
Following gene: 238028601
Centisome position: 89.25
GC content: 71.6
Gene sequence:
>507_bases ATGGAACTGAGCCATCAGCCCCGGCTGTTCGACTTCGAAGTCGAATCGTCGGAGGATTTCACCTTCATCCCGATGATCGT GCGCTTTCACCTCGATCGCTGCGCATTGCGGATTTCGCTCGACCAGTGGCAACGGTTGCCGCTGGAGGACCGGCGGCTGC TTGCGCGGTTCCCGGTGGTGGATGAGGCGCACGAGCCCGACGCGGCCCGGCCTGACGTGGCCCGGCCCGACTTCGCGCGC GCGCTGGCGGACATGTTGCGCGCGCATGCGGCCGGCGAGGCCGAGCGCATCGTGCCCGAGGCGGCGCCGGCGTGGCGCGA GCCCGCGGTGGTGCCGGCCGCGCTCGCCGCGCAATGCGCGCTGGCCGGGCTGCCGGTGCCTGACGCGGCGGCCTGGGCGG CGCTCGGGCCGTTCGAGCGTTACGCGCTGGCCAAGCTGTCGCGCAAGCCCAAGCTCAACCATGACTTCCTGCCGGCGATG CGCGAGTTCGGACTCGCGCCGCGCTGA
Upstream 100 bases:
>100_bases TACCGGAACGCGGCGAAACCCGCCGGGCCGGGCTTGCCGGGCGCGGCGGGTTTCGCCGGCGCGGACTGCCGCGCTCATCT CATCCGGGACCGGAATCATC
Downstream 100 bases:
>100_bases ACCCGGCGCGGGCGGATCCGGCCACGACCGGCCCCACGGGCCGGCGGCGCCGCGGCATCGGCGCGCCCGCGGGCGAGCGC GCCGCCGCGCCGCGGCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MELSHQPRLFDFEVESSEDFTFIPMIVRFHLDRCALRISLDQWQRLPLEDRRLLARFPVVDEAHEPDAARPDVARPDFAR ALADMLRAHAAGEAERIVPEAAPAWREPAVVPAALAAQCALAGLPVPDAAAWAALGPFERYALAKLSRKPKLNHDFLPAM REFGLAPR
Sequences:
>Translated_168_residues MELSHQPRLFDFEVESSEDFTFIPMIVRFHLDRCALRISLDQWQRLPLEDRRLLARFPVVDEAHEPDAARPDVARPDFAR ALADMLRAHAAGEAERIVPEAAPAWREPAVVPAALAAQCALAGLPVPDAAAWAALGPFERYALAKLSRKPKLNHDFLPAM REFGLAPR >Mature_168_residues MELSHQPRLFDFEVESSEDFTFIPMIVRFHLDRCALRISLDQWQRLPLEDRRLLARFPVVDEAHEPDAARPDVARPDFAR ALADMLRAHAAGEAERIVPEAAPAWREPAVVPAALAAQCALAGLPVPDAAAWAALGPFERYALAKLSRKPKLNHDFLPAM REFGLAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18809; Mature: 18809
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSHQPRLFDFEVESSEDFTFIPMIVRFHLDRCALRISLDQWQRLPLEDRRLLARFPVV CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEECHHHHHCCCCHHHHHHHHCCCC DEAHEPDAARPDVARPDFARALADMLRAHAAGEAERIVPEAAPAWREPAVVPAALAAQCA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH LAGLPVPDAAAWAALGPFERYALAKLSRKPKLNHDFLPAMREFGLAPR HCCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MELSHQPRLFDFEVESSEDFTFIPMIVRFHLDRCALRISLDQWQRLPLEDRRLLARFPVV CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEECHHHHHCCCCHHHHHHHHCCCC DEAHEPDAARPDVARPDFARALADMLRAHAAGEAERIVPEAAPAWREPAVVPAALAAQCA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH LAGLPVPDAAAWAALGPFERYALAKLSRKPKLNHDFLPAMREFGLAPR HCCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA