| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is glpK [H]
Identifier: 238028578
GI number: 238028578
Start: 3456345
End: 3457847
Strand: Direct
Name: glpK [H]
Synonym: bglu_1g30420
Alternate gene names: 238028578
Gene position: 3456345-3457847 (Clockwise)
Preceding gene: 238028577
Following gene: 238028579
Centisome position: 88.48
GC content: 68.8
Gene sequence:
>1503_bases ATGCAGGATCAATACATCCTCGCACTCGACCAGGGCACGACGAGCTCACGCGCGATGCTGTTCGATCGCCAGGGCAACAT CGTATCGATCGCCCAGAAGGAGTTCGAACAAATCTATCCGCGCCCGGGCTGGGTCGAGCACGACCCGCACGAGATCTGGT CGACGCAGGCCGGCGTCGCCGCCGAGGCGGTCACGCGAGTCGGCCTCAACGGCACCGCGATCGCCGCGATCGGGATCACC AACCAGCGCGAGACGACCATCGTCTGGGACCGCGAGACGGGCCAGCCGATCTACAACGCGATCGTATGGCAGGACCGCCG CACCGCCGACTTCTGCGACGCGCTGAAGGCCGACGGCCTGGAAGCTATGGTGCGCGCGAAGACCGGCCTGCCGATCGACT CCTACTTCTCGGGCACCAAGATCCGCTGGATCCTCGACAACGTCGAGGGCGCGCGCGAGAAGGCGCGCCAGGGCCGGCTC GCGTTCGGCACCGTCGACAGCTGGCTGGTGTGGAACTTCACCAAGCACGAGCTGCACGTGACCGACGTGACCAACGCGTC GCGCACCATGCTGTTCAACATCCACACGCGCCAATGGGACGACGAGCTGCTGGCCGCGCTCGACATCCCGCGCAGCATGC TGCCCGAGGTGCGCGCCTCGTCCGAGGTCTACGGCCACACCAAGACCACCGTGTTCGCCTCGAAACTGCCGCTGGCCGGC ATCGCGGGCGACCAGCAGGCGGCCCTGTTCGGCCAGATGTGCACCACCAAGGGCATGGTGAAGAACACCTACGGCACCGG CTGCTTCCTCGTGATGAACACCGGCGACACGCCGATCGAGTCGAGCAACAACCTCGTCACGACCATCGCCTGGCAGGTGG GCGACCAGGTGAACTACGCGCTCGAAGGCAGCATCTTCATCGCCGGCGCGGTGGTGCAGTGGCTGCGCGACGGGCTCGGC ATCATCAAGTCGGCCGCCGAAATCGAGAAGCTCGCGGCGAGCGTGCCGCACACCGACGGCGTCTATCTGGTGCCGGCCTT CGCCGGGCTCGGCGCGCCGCACTGGAACGCCCGCGCGCGCGGCTCGCTGTTCGGCGTCACGCGCGGCACCACCGATGCGC ACCTGGCGCGCGCCGCGCTCGACGCGATCGCCTACCAGTCGCTCGACGTGCTCGCGGCGATGGAAGCCGATTCGGGCATC AGCATCGGCGAGCTGCGCGTGGACGGCGGCGCGAGCGCGAACAACCTGCTGATGCAGTTCCAGGCCGATCTGCTCGGCGT GGACGTGGTGCGCCCGCGCATCACCGAAACCACCGCGCTCGGCGCCGCGTATCTCGCCGGGCTCGCCACCGGCTACTGGC AGAACATCGACGAGGTGCGCAGCCAGTGGAAGCTCGACCGGCGCTTCTCGCCGTCGCTGCCGTCCGACGAGGTGAGCGCG GCGCTGGCCGGCTGGCAGCGCGCGGTGCGCGCCGCCAAGGCGTGGGCCGACGACGCGCAGTAA
Upstream 100 bases:
>100_bases CGCGGGGCGCCGAGGGGCGCGCCGCGCGGCAGCGACAGCAGCACGCGCCGCCACCAGGGCGATGCGGATCACAATTACGC ACCAAATGGAGATGAGACAG
Downstream 100 bases:
>100_bases ACTGCGGGTCCGCCGCACGACCGCGGCGGCCGGCAGCGGGCAACACCACCACGATTCATAACGAGCAGGCGGACCGTGCA GCGCGCGAGTCCGCCGCATT
Product: glycerol kinase
Products: NA
Alternate protein names: ATP:glycerol 3-phosphotransferase; Glycerokinase; GK [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MQDQYILALDQGTTSSRAMLFDRQGNIVSIAQKEFEQIYPRPGWVEHDPHEIWSTQAGVAAEAVTRVGLNGTAIAAIGIT NQRETTIVWDRETGQPIYNAIVWQDRRTADFCDALKADGLEAMVRAKTGLPIDSYFSGTKIRWILDNVEGAREKARQGRL AFGTVDSWLVWNFTKHELHVTDVTNASRTMLFNIHTRQWDDELLAALDIPRSMLPEVRASSEVYGHTKTTVFASKLPLAG IAGDQQAALFGQMCTTKGMVKNTYGTGCFLVMNTGDTPIESSNNLVTTIAWQVGDQVNYALEGSIFIAGAVVQWLRDGLG IIKSAAEIEKLAASVPHTDGVYLVPAFAGLGAPHWNARARGSLFGVTRGTTDAHLARAALDAIAYQSLDVLAAMEADSGI SIGELRVDGGASANNLLMQFQADLLGVDVVRPRITETTALGAAYLAGLATGYWQNIDEVRSQWKLDRRFSPSLPSDEVSA ALAGWQRAVRAAKAWADDAQ
Sequences:
>Translated_500_residues MQDQYILALDQGTTSSRAMLFDRQGNIVSIAQKEFEQIYPRPGWVEHDPHEIWSTQAGVAAEAVTRVGLNGTAIAAIGIT NQRETTIVWDRETGQPIYNAIVWQDRRTADFCDALKADGLEAMVRAKTGLPIDSYFSGTKIRWILDNVEGAREKARQGRL AFGTVDSWLVWNFTKHELHVTDVTNASRTMLFNIHTRQWDDELLAALDIPRSMLPEVRASSEVYGHTKTTVFASKLPLAG IAGDQQAALFGQMCTTKGMVKNTYGTGCFLVMNTGDTPIESSNNLVTTIAWQVGDQVNYALEGSIFIAGAVVQWLRDGLG IIKSAAEIEKLAASVPHTDGVYLVPAFAGLGAPHWNARARGSLFGVTRGTTDAHLARAALDAIAYQSLDVLAAMEADSGI SIGELRVDGGASANNLLMQFQADLLGVDVVRPRITETTALGAAYLAGLATGYWQNIDEVRSQWKLDRRFSPSLPSDEVSA ALAGWQRAVRAAKAWADDAQ >Mature_500_residues MQDQYILALDQGTTSSRAMLFDRQGNIVSIAQKEFEQIYPRPGWVEHDPHEIWSTQAGVAAEAVTRVGLNGTAIAAIGIT NQRETTIVWDRETGQPIYNAIVWQDRRTADFCDALKADGLEAMVRAKTGLPIDSYFSGTKIRWILDNVEGAREKARQGRL AFGTVDSWLVWNFTKHELHVTDVTNASRTMLFNIHTRQWDDELLAALDIPRSMLPEVRASSEVYGHTKTTVFASKLPLAG IAGDQQAALFGQMCTTKGMVKNTYGTGCFLVMNTGDTPIESSNNLVTTIAWQVGDQVNYALEGSIFIAGAVVQWLRDGLG IIKSAAEIEKLAASVPHTDGVYLVPAFAGLGAPHWNARARGSLFGVTRGTTDAHLARAALDAIAYQSLDVLAAMEADSGI SIGELRVDGGASANNLLMQFQADLLGVDVVRPRITETTALGAAYLAGLATGYWQNIDEVRSQWKLDRRFSPSLPSDEVSA ALAGWQRAVRAAKAWADDAQ
Specific function: Key enzyme in the regulation of glycerol uptake and metabolism [H]
COG id: COG0554
COG function: function code C; Glycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI189409120, Length=501, Percent_Identity=45.7085828343313, Blast_Score=447, Evalue=1e-125, Organism=Homo sapiens, GI4504007, Length=501, Percent_Identity=45.7085828343313, Blast_Score=446, Evalue=1e-125, Organism=Homo sapiens, GI42794763, Length=506, Percent_Identity=45.8498023715415, Blast_Score=445, Evalue=1e-125, Organism=Homo sapiens, GI41393575, Length=501, Percent_Identity=44.5109780439122, Blast_Score=437, Evalue=1e-122, Organism=Homo sapiens, GI88196792, Length=510, Percent_Identity=32.156862745098, Blast_Score=309, Evalue=4e-84, Organism=Escherichia coli, GI1790361, Length=497, Percent_Identity=60.5633802816901, Blast_Score=654, Evalue=0.0, Organism=Escherichia coli, GI1790005, Length=485, Percent_Identity=25.360824742268, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1789168, Length=487, Percent_Identity=25.0513347022587, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1789987, Length=480, Percent_Identity=23.3333333333333, Blast_Score=102, Evalue=8e-23, Organism=Escherichia coli, GI1787789, Length=481, Percent_Identity=25.1559251559252, Blast_Score=86, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17535599, Length=500, Percent_Identity=44, Blast_Score=416, Evalue=1e-116, Organism=Caenorhabditis elegans, GI71986140, Length=517, Percent_Identity=24.3713733075435, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI71986147, Length=258, Percent_Identity=30.2325581395349, Blast_Score=127, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6321755, Length=496, Percent_Identity=37.7016129032258, Blast_Score=303, Evalue=4e-83, Organism=Drosophila melanogaster, GI17864214, Length=508, Percent_Identity=42.7165354330709, Blast_Score=407, Evalue=1e-114, Organism=Drosophila melanogaster, GI24655555, Length=480, Percent_Identity=42.7083333333333, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24655560, Length=480, Percent_Identity=42.7083333333333, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24655570, Length=480, Percent_Identity=42.7083333333333, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24655574, Length=480, Percent_Identity=42.7083333333333, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24655565, Length=480, Percent_Identity=42.7083333333333, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24654573, Length=448, Percent_Identity=43.3035714285714, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI19922058, Length=530, Percent_Identity=33.0188679245283, Blast_Score=286, Evalue=2e-77, Organism=Drosophila melanogaster, GI24652871, Length=497, Percent_Identity=34.0040241448692, Blast_Score=275, Evalue=7e-74, Organism=Drosophila melanogaster, GI24656367, Length=513, Percent_Identity=30.2144249512671, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI21357867, Length=525, Percent_Identity=29.1428571428571, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24656372, Length=367, Percent_Identity=29.9727520435967, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI45552909, Length=308, Percent_Identity=28.2467532467532, Blast_Score=130, Evalue=3e-30,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR005999 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.30 [H]
Molecular weight: Translated: 54385; Mature: 54385
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDQYILALDQGTTSSRAMLFDRQGNIVSIAQKEFEQIYPRPGWVEHDPHEIWSTQAGVA CCCCEEEEEECCCCCCEEEEEECCCCEEEHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHH AEAVTRVGLNGTAIAAIGITNQRETTIVWDRETGQPIYNAIVWQDRRTADFCDALKADGL HHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHEEECCCCCHHHHHHHHCCCH EAMVRAKTGLPIDSYFSGTKIRWILDNVEGAREKARQGRLAFGTVDSWLVWNFTKHELHV HHHHHHHCCCCHHHCCCCCEEEEEEECCHHHHHHHHCCCEEEECCCCEEEEEEECCEEEE TDVTNASRTMLFNIHTRQWDDELLAALDIPRSMLPEVRASSEVYGHTKTTVFASKLPLAG EECCCCCEEEEEEEECCCCHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCEEEECCCCCCC IAGDQQAALFGQMCTTKGMVKNTYGTGCFLVMNTGDTPIESSNNLVTTIAWQVGDQVNYA CCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCEE LEGSIFIAGAVVQWLRDGLGIIKSAAEIEKLAASVPHTDGVYLVPAFAGLGAPHWNARAR ECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCCCC GSLFGVTRGTTDAHLARAALDAIAYQSLDVLAAMEADSGISIGELRVDGGASANNLLMQF CCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEECCCCCHHHHHHEE QADLLGVDVVRPRITETTALGAAYLAGLATGYWQNIDEVRSQWKLDRRFSPSLPSDEVSA HHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHH ALAGWQRAVRAAKAWADDAQ HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQDQYILALDQGTTSSRAMLFDRQGNIVSIAQKEFEQIYPRPGWVEHDPHEIWSTQAGVA CCCCEEEEEECCCCCCEEEEEECCCCEEEHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHH AEAVTRVGLNGTAIAAIGITNQRETTIVWDRETGQPIYNAIVWQDRRTADFCDALKADGL HHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHEEECCCCCHHHHHHHHCCCH EAMVRAKTGLPIDSYFSGTKIRWILDNVEGAREKARQGRLAFGTVDSWLVWNFTKHELHV HHHHHHHCCCCHHHCCCCCEEEEEEECCHHHHHHHHCCCEEEECCCCEEEEEEECCEEEE TDVTNASRTMLFNIHTRQWDDELLAALDIPRSMLPEVRASSEVYGHTKTTVFASKLPLAG EECCCCCEEEEEEEECCCCHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCEEEECCCCCCC IAGDQQAALFGQMCTTKGMVKNTYGTGCFLVMNTGDTPIESSNNLVTTIAWQVGDQVNYA CCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCEE LEGSIFIAGAVVQWLRDGLGIIKSAAEIEKLAASVPHTDGVYLVPAFAGLGAPHWNARAR ECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCCCC GSLFGVTRGTTDAHLARAALDAIAYQSLDVLAAMEADSGISIGELRVDGGASANNLLMQF CCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEECCCCCHHHHHHEE QADLLGVDVVRPRITETTALGAAYLAGLATGYWQNIDEVRSQWKLDRRFSPSLPSDEVSA HHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHH ALAGWQRAVRAAKAWADDAQ HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA