| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028531
Identifier: 238028531
GI number: 238028531
Start: 3391157
End: 3391873
Strand: Reverse
Name: 238028531
Synonym: bglu_1g29950
Alternate gene names: NA
Gene position: 3391873-3391157 (Counterclockwise)
Preceding gene: 238028532
Following gene: 238028530
Centisome position: 86.83
GC content: 73.64
Gene sequence:
>717_bases ATGCACGCAGGCGCCGGTCGGCCGTGCGCCGTGCCGTGTCCGCCGCGCCGGCCCCGGGTTCCGACCCGTCATGTTGCACT GCATTCGCTTTGCCAATGCGGGTCACACCGGATATTCCGTGGCGGCGCGACAAACACCCGGTATGCTAAAATCCGCCGGT TTTCCTATTCGGCCTCAACCTTTCGCATGCCGTCATTCGAGCCCGTGTCACGCCAGCCGCGCCATTGCGCGGCCGCGGCG GAAACCGACCCGCGCGGCGGCGTGCGTGGCAGCGTCGTCGCTGCGCCGGCCGGCCCGCATCGCGCGGCGCCACCGGCACG ACGCACGCGACCGAGTGGACAGCCGAACCATGAACTCGGGCTCAGCCCCCGCTCCGATCGCGAATCCCAGGTCGTCGACG CCGCCGCGTCGTCCGCCCGGACAAGACATTCCGGTCGCCGCGAAGCCGCCCATCCCGCCTGCCCAGTCCGCGCCGCTCAC TTTCCAGCGTTCACGTTTCCCCCGTTTTCTCCCGTCGCATCGCGCACCGCTTCGCCGGCCGCGCCGGTGCGGCTCGGGCG CGTCCGGCGTGGCCGGGCAGCCGCCGCGCGACGAGCAGACGGAACCGGGCACGGCGGCGCGGGCCAGCGCGGCGCCCGGG GGGCCGGCCGTTCTCTCCGACATGGCTCGGCGCGAGCCGCCACGCGCGTCTGCCGCGCGGGCGGCGCGCACGAATGA
Upstream 100 bases:
>100_bases GGTTTTCCAGTGCCACGATCGTGAAGCTGCTGAAGGTCGGCGACGACGAGTTCGGCGAATTCTAGCGGCACCGTACCGTG GTCGGCCCGCCTTGGTCCGC
Downstream 100 bases:
>100_bases TCGGAAACATCAGTAGAAAGAAGCGACATTCAATCGACTTTTCATCCAACTCTCAGACTGAAGGAATCACGCATGAAGAT TCACGAGTACCAGGGTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MHAGAGRPCAVPCPPRRPRVPTRHVALHSLCQCGSHRIFRGGATNTRYAKIRRFSYSASTFRMPSFEPVSRQPRHCAAAA ETDPRGGVRGSVVAAPAGPHRAAPPARRTRPSGQPNHELGLSPRSDRESQVVDAAASSARTRHSGRREAAHPACPVRAAH FPAFTFPPFSPVASRTASPAAPVRLGRVRRGRAAAARRADGTGHGGAGQRGARGAGRSLRHGSARAATRVCRAGGAHE
Sequences:
>Translated_238_residues MHAGAGRPCAVPCPPRRPRVPTRHVALHSLCQCGSHRIFRGGATNTRYAKIRRFSYSASTFRMPSFEPVSRQPRHCAAAA ETDPRGGVRGSVVAAPAGPHRAAPPARRTRPSGQPNHELGLSPRSDRESQVVDAAASSARTRHSGRREAAHPACPVRAAH FPAFTFPPFSPVASRTASPAAPVRLGRVRRGRAAAARRADGTGHGGAGQRGARGAGRSLRHGSARAATRVCRAGGAHE >Mature_238_residues MHAGAGRPCAVPCPPRRPRVPTRHVALHSLCQCGSHRIFRGGATNTRYAKIRRFSYSASTFRMPSFEPVSRQPRHCAAAA ETDPRGGVRGSVVAAPAGPHRAAPPARRTRPSGQPNHELGLSPRSDRESQVVDAAASSARTRHSGRREAAHPACPVRAAH FPAFTFPPFSPVASRTASPAAPVRLGRVRRGRAAAARRADGTGHGGAGQRGARGAGRSLRHGSARAATRVCRAGGAHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25054; Mature: 25054
Theoretical pI: Translated: 12.52; Mature: 12.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAGAGRPCAVPCPPRRPRVPTRHVALHSLCQCGSHRIFRGGATNTRYAKIRRFSYSAST CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCE FRMPSFEPVSRQPRHCAAAAETDPRGGVRGSVVAAPAGPHRAAPPARRTRPSGQPNHELG ECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCCCC LSPRSDRESQVVDAAASSARTRHSGRREAAHPACPVRAAHFPAFTFPPFSPVASRTASPA CCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC APVRLGRVRRGRAAAARRADGTGHGGAGQRGARGAGRSLRHGSARAATRVCRAGGAHE CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MHAGAGRPCAVPCPPRRPRVPTRHVALHSLCQCGSHRIFRGGATNTRYAKIRRFSYSAST CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCE FRMPSFEPVSRQPRHCAAAAETDPRGGVRGSVVAAPAGPHRAAPPARRTRPSGQPNHELG ECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCCCC LSPRSDRESQVVDAAASSARTRHSGRREAAHPACPVRAAHFPAFTFPPFSPVASRTASPA CCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC APVRLGRVRRGRAAAARRADGTGHGGAGQRGARGAGRSLRHGSARAATRVCRAGGAHE CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA