Click here to switch to the map view.

The map label for this gene is 238028526

Identifier: 238028526

GI number: 238028526

Start: 3385192

End: 3387003

Strand: Reverse

Name: 238028526

Synonym: bglu_1g29900

Alternate gene names: NA

Gene position: 3387003-3385192 (Counterclockwise)

Preceding gene: 238028527

Following gene: 238028525

Centisome position: 86.7

GC content: 70.64

Gene sequence:

>1812_bases
GTGCGCCGGTTGCTGACATCCGGTTCGCTCATGCCCTCATCCGTTCTGCGTTCTCTGGCGCTGATTGCGCTTGCCGTCGC
CCTGATCCTGCCCTACGCGGTTACCAACCACACCTATCCGATCCCGACGTTCTATTCCGAATTCACCGCATTCGGCCTCT
ATGCGTTGCTCGGCGTGCTGGTGGTGCTGCTCGCGCGCGGCGAGCGCGCGGTGCGGCCGTTCGCGGCGCCGCTCGCCTGG
GGCGCGCCGCTCGCGTTCGGCGCGGTACTGGTCGTGCAGACGCTGGTGCTGCCGCTGTCGCAGCCGTCCATGAACGGGCT
CGCGCTCGGCTACCTGCTCGCCTCGCTGGTGGCGATGCAGTCGGGCTACGTGCTGGGTCGCGTGCTGTCGGTGGAGGCGG
TCGCGCGGATGATGGCCGGCGCGCTGATCGTCGGCGGGGTGTTCGCGGTGGGCTGCCAGGTGGTGCAACTGCTCCATCTC
GAATCCACGTTCTCGCCGTTCGTGGTCAGCTACGGCGTGCTCGCCGACCGCCGGCCATACGGCAACATGGCGCAGGCGAA
CCACCTGGCCACCTACATCGCGTTCGCGCTGGCGAGCACGCTCTATCTCGCGCAGGCGCGCCGGCTGCCTGCCTGGGGCT
GGCTGCCGCTGTCGATCGTGCTGTCGGCCGGGCTCGCGTTCACGGTGTCGCGCGGGCCGTGGCTGCAGGTGGCGGTGATG
GTGGCGGCGGGGCTCTGGACGGCGCTGGCCGCGGCGCGGCGCGGCCAGGGGCGCGGCGCGGCGTGGCTGTATCCGCTCGC
GCTGGCGGTGGTGTTCGTCGCGGTGAACGTGGCGGTGCGCTGGGCCAATCTGCACTATCACCTCGGTCTCGCGGAATCGG
CCGCCGAGCGCATGCGCGACGCCGGGCAGATCGCGCCGCGCCTCGCGCTCTGGAAGTACGGGCTGACGATGTTCCGTGAG
CATCCGTGGCTCGGCGTGGGCTGGGGCGAATTCCCGCTGCATCAGTTCGAGCTGGTGCGCGCGCTCGGCGGCGTCGAGAT
CGCCAACAACTCGCACGACATCTTCATCGATCTGCTCGCGAAATCGGGCTTGCTAGGCCTTGGCGCGCTGCTCGTCACGC
TGCTGCTGTGGTTCGTGCGCGTGCTGCGCGTGCCGCACACCGGCGAGCGGCTCTACGGTCTCGCGCTGCTGGGCGTGCTG
CTGATGCATGCGCTCGTCGAGTACCCGCAGCAATACACGTTCTTCACGCTGCCCGCGATGTTCGTGATCGGCCTGCTCGA
GACGCGCGCGCTGCGCGCACTGCCGGGGCGGCTCGCCTATGCGGTGTTCGCGATCGTGTCGGTGGCGGCGCTGCTCGCGC
TGTATCCGGTGCTGCGCGACTATCAGCGCGCCGAGGTGCTCTATTACGGCACGAACCCGGCCGAGCAGTATCGCGCGGCG
CCGGCGTTCCTGTTCGGCGCCTGGGGCGAATACGGCGCGGCGACCCTGATGCCGATCTCGCGCGAGGGCCTGCCGGCCAA
GCTGGCCGCACACCAGCGCGCGATCGCGCTGCTGCCGGGCGAGACCGTGCTGCGCCGCTACGCGGTGCTCCAAGCGCTCG
ACGGGCGCGACGGCGACGCGCTCGACACGGTCGCGCGCCTGCGGATCTTCGCCGAGGAACTGCACGACTGGCCCGCGCAG
CTTGCGGCGCTCTACAAGCTCGTCGACGCGCAGCCCACGCTGGGCGCCTTCAAGCAGGCGCTGGTGGCGCGCTACGGCAA
GGACGCGGCCGCGCCGGACGACGCTGACGACGGCGACGATTCGGACGACTGA

Upstream 100 bases:

>100_bases
CGCCGGCAAACGGGGGCGGACCATCGGCAGACCGGCCGCGGCTGACGATGTGCCGACAGTTGCGCACACGGGCGACTCAG
CGCCGGAAATTTTTTGTATA

Downstream 100 bases:

>100_bases
CGCACGAGCGCACGAGCGCAGGAGCGCACGCGAGGCCCGGGCCGCCTCGCCGCGGCGTGCCGCGGGGCGTGCGTTCCCGC
AGCCGAGCGATGCACCGCAC

Product: O-antigen polymerase family protein

Products: NA

Alternate protein names: O-Antigen Polymerase Family Protein; O-Antigen Ligase; Lipid A Core

Number of amino acids: Translated: 603; Mature: 603

Protein sequence:

>603_residues
MRRLLTSGSLMPSSVLRSLALIALAVALILPYAVTNHTYPIPTFYSEFTAFGLYALLGVLVVLLARGERAVRPFAAPLAW
GAPLAFGAVLVVQTLVLPLSQPSMNGLALGYLLASLVAMQSGYVLGRVLSVEAVARMMAGALIVGGVFAVGCQVVQLLHL
ESTFSPFVVSYGVLADRRPYGNMAQANHLATYIAFALASTLYLAQARRLPAWGWLPLSIVLSAGLAFTVSRGPWLQVAVM
VAAGLWTALAAARRGQGRGAAWLYPLALAVVFVAVNVAVRWANLHYHLGLAESAAERMRDAGQIAPRLALWKYGLTMFRE
HPWLGVGWGEFPLHQFELVRALGGVEIANNSHDIFIDLLAKSGLLGLGALLVTLLLWFVRVLRVPHTGERLYGLALLGVL
LMHALVEYPQQYTFFTLPAMFVIGLLETRALRALPGRLAYAVFAIVSVAALLALYPVLRDYQRAEVLYYGTNPAEQYRAA
PAFLFGAWGEYGAATLMPISREGLPAKLAAHQRAIALLPGETVLRRYAVLQALDGRDGDALDTVARLRIFAEELHDWPAQ
LAALYKLVDAQPTLGAFKQALVARYGKDAAAPDDADDGDDSDD

Sequences:

>Translated_603_residues
MRRLLTSGSLMPSSVLRSLALIALAVALILPYAVTNHTYPIPTFYSEFTAFGLYALLGVLVVLLARGERAVRPFAAPLAW
GAPLAFGAVLVVQTLVLPLSQPSMNGLALGYLLASLVAMQSGYVLGRVLSVEAVARMMAGALIVGGVFAVGCQVVQLLHL
ESTFSPFVVSYGVLADRRPYGNMAQANHLATYIAFALASTLYLAQARRLPAWGWLPLSIVLSAGLAFTVSRGPWLQVAVM
VAAGLWTALAAARRGQGRGAAWLYPLALAVVFVAVNVAVRWANLHYHLGLAESAAERMRDAGQIAPRLALWKYGLTMFRE
HPWLGVGWGEFPLHQFELVRALGGVEIANNSHDIFIDLLAKSGLLGLGALLVTLLLWFVRVLRVPHTGERLYGLALLGVL
LMHALVEYPQQYTFFTLPAMFVIGLLETRALRALPGRLAYAVFAIVSVAALLALYPVLRDYQRAEVLYYGTNPAEQYRAA
PAFLFGAWGEYGAATLMPISREGLPAKLAAHQRAIALLPGETVLRRYAVLQALDGRDGDALDTVARLRIFAEELHDWPAQ
LAALYKLVDAQPTLGAFKQALVARYGKDAAAPDDADDGDDSDD
>Mature_603_residues
MRRLLTSGSLMPSSVLRSLALIALAVALILPYAVTNHTYPIPTFYSEFTAFGLYALLGVLVVLLARGERAVRPFAAPLAW
GAPLAFGAVLVVQTLVLPLSQPSMNGLALGYLLASLVAMQSGYVLGRVLSVEAVARMMAGALIVGGVFAVGCQVVQLLHL
ESTFSPFVVSYGVLADRRPYGNMAQANHLATYIAFALASTLYLAQARRLPAWGWLPLSIVLSAGLAFTVSRGPWLQVAVM
VAAGLWTALAAARRGQGRGAAWLYPLALAVVFVAVNVAVRWANLHYHLGLAESAAERMRDAGQIAPRLALWKYGLTMFRE
HPWLGVGWGEFPLHQFELVRALGGVEIANNSHDIFIDLLAKSGLLGLGALLVTLLLWFVRVLRVPHTGERLYGLALLGVL
LMHALVEYPQQYTFFTLPAMFVIGLLETRALRALPGRLAYAVFAIVSVAALLALYPVLRDYQRAEVLYYGTNPAEQYRAA
PAFLFGAWGEYGAATLMPISREGLPAKLAAHQRAIALLPGETVLRRYAVLQALDGRDGDALDTVARLRIFAEELHDWPAQ
LAALYKLVDAQPTLGAFKQALVARYGKDAAAPDDADDGDDSDD

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65135; Mature: 65135

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLTSGSLMPSSVLRSLALIALAVALILPYAVTNHTYPIPTFYSEFTAFGLYALLGVL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VVLLARGERAVRPFAAPLAWGAPLAFGAVLVVQTLVLPLSQPSMNGLALGYLLASLVAMQ
HHHHHCCCHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
SGYVLGRVLSVEAVARMMAGALIVGGVFAVGCQVVQLLHLESTFSPFVVSYGVLADRRPY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
GNMAQANHLATYIAFALASTLYLAQARRLPAWGWLPLSIVLSAGLAFTVSRGPWLQVAVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHH
VAAGLWTALAAARRGQGRGAAWLYPLALAVVFVAVNVAVRWANLHYHLGLAESAAERMRD
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHH
AGQIAPRLALWKYGLTMFREHPWLGVGWGEFPLHQFELVRALGGVEIANNSHDIFIDLLA
HHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCEEEECCCCCEEHHHHH
KSGLLGLGALLVTLLLWFVRVLRVPHTGERLYGLALLGVLLMHALVEYPQQYTFFTLPAM
HCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FVIGLLETRALRALPGRLAYAVFAIVSVAALLALYPVLRDYQRAEVLYYGTNPAEQYRAA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHCC
PAFLFGAWGEYGAATLMPISREGLPAKLAAHQRAIALLPGETVLRRYAVLQALDGRDGDA
HHHHHCCCCCCCCEEECEECCCCCCHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCHH
LDTVARLRIFAEELHDWPAQLAALYKLVDAQPTLGAFKQALVARYGKDAAAPDDADDGDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
SDD
CCC
>Mature Secondary Structure
MRRLLTSGSLMPSSVLRSLALIALAVALILPYAVTNHTYPIPTFYSEFTAFGLYALLGVL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VVLLARGERAVRPFAAPLAWGAPLAFGAVLVVQTLVLPLSQPSMNGLALGYLLASLVAMQ
HHHHHCCCHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
SGYVLGRVLSVEAVARMMAGALIVGGVFAVGCQVVQLLHLESTFSPFVVSYGVLADRRPY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
GNMAQANHLATYIAFALASTLYLAQARRLPAWGWLPLSIVLSAGLAFTVSRGPWLQVAVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHH
VAAGLWTALAAARRGQGRGAAWLYPLALAVVFVAVNVAVRWANLHYHLGLAESAAERMRD
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHH
AGQIAPRLALWKYGLTMFREHPWLGVGWGEFPLHQFELVRALGGVEIANNSHDIFIDLLA
HHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCEEEECCCCCEEHHHHH
KSGLLGLGALLVTLLLWFVRVLRVPHTGERLYGLALLGVLLMHALVEYPQQYTFFTLPAM
HCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FVIGLLETRALRALPGRLAYAVFAIVSVAALLALYPVLRDYQRAEVLYYGTNPAEQYRAA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHCC
PAFLFGAWGEYGAATLMPISREGLPAKLAAHQRAIALLPGETVLRRYAVLQALDGRDGDA
HHHHHCCCCCCCCEEECEECCCCCCHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCHH
LDTVARLRIFAEELHDWPAQLAALYKLVDAQPTLGAFKQALVARYGKDAAAPDDADDGDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
SDD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA