| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is yheT [H]
Identifier: 238028520
GI number: 238028520
Start: 3377853
End: 3378899
Strand: Direct
Name: yheT [H]
Synonym: bglu_1g29840
Alternate gene names: 238028520
Gene position: 3377853-3378899 (Clockwise)
Preceding gene: 238028519
Following gene: 238028521
Centisome position: 86.47
GC content: 73.35
Gene sequence:
>1047_bases ATGTCCTCCGCCTCCCCGCCCTCGCCGCTGGCCGGGCCCGAAGAGCCGGCCAGCGCGGCGCGCTACCGCGCGCCGCGCTG GCTGCCCAACAGCCACGCGCAGACCATCTTCCCGGCCCTGTTCGGGCGCCGGCCTGCCGTGGCCTATCGGCGCGAACGCT GGGACACGCCCGACGGCGACTTCATCGATCTCGACTGGCTGGCCCATCCGGCCGGCGCCGAACCGGCGCCCGACGCGCCG CTGATGGTGGTGTTCCACGGTCTCGAGGGCAACTCGGATTCGCGCTACGCGCTGCTGCTGATGGCCGCCGCGCGCGAGCG CGGCTGGCACGGCGTGGTGCCGCATTTCCGCAGCTGCAGCGGCGAGCTGAACCGGCTGCCGCGCTTCTATCACCTGGCCG ACGGCGCCGAGGTGGACTGGATCCTGCGCCGGCTCGCCGCCGGCCGCCGCGGCCCGGTGTTCGCGGTCGGCGTCTCGCTC GGCGGCAACGTGCTGCTGCACTGGCTCGGCGAGCGGCGCGGCGATCGCTCGATCGTCACGGCGGCGGCGGCCGTGTCGAC GCCGCTCGACGTCCATGCCGGCGGCCGCGCGATCTCGCAGGGCTTCTCCATGGTCTACACGCGCTCGTTCCTGAAGACCC TGAAGATCAAGGCCTCGGCCAAGCTGGTCCAGCATCCGGACCTGTTCGACGCGCGCCGGATGCTGGCCGCGCGCACCATG CACGAATTCGACGACATCGTCACCGCGCCGCTGCACGGCTTCGCGAGCGCCGACGACTACTGGACCCGCGCCACCACGCG CCCGCTGCTGCGCGCCATCGAGATCCCGACCCTGCTGCTCAACGCGCGCAACGACCCGTTCCTGCCCGCCTCGGCGCTGC CGGGGCCGGCCGACGTGGCGCCGGCCGTCGAACTGGACCAGCCCGCGCACGGCGGCCACGTCGGCTTCATGACCGGCCCG TTCCCCGGGCACGACGACTGGATGCCGCTGCGCGTGTTCCGTTTCATTTCCCGCTTCGCGCCTGCGGCGCCGACCCGACA TGGATGA
Upstream 100 bases:
>100_bases CACATCCATGCGAGCCCGATCCCGGAGCAGGCGGCCACCCAGTTCGCCGCCAAGATCCGTCACGGCCAGGGCCCGCTGCA CTGAGCGAGGCGCCCGCGCG
Downstream 100 bases:
>100_bases AATCGTCCGCCAGGCCCTCGCCAAATGGCCGAACGTACCGCACTGCACCGGCTGGCTGCAGCTCGACCGGCGCGGCGCCT GGCGCATGCGCGACGAGGCC
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MSSASPPSPLAGPEEPASAARYRAPRWLPNSHAQTIFPALFGRRPAVAYRRERWDTPDGDFIDLDWLAHPAGAEPAPDAP LMVVFHGLEGNSDSRYALLLMAAARERGWHGVVPHFRSCSGELNRLPRFYHLADGAEVDWILRRLAAGRRGPVFAVGVSL GGNVLLHWLGERRGDRSIVTAAAAVSTPLDVHAGGRAISQGFSMVYTRSFLKTLKIKASAKLVQHPDLFDARRMLAARTM HEFDDIVTAPLHGFASADDYWTRATTRPLLRAIEIPTLLLNARNDPFLPASALPGPADVAPAVELDQPAHGGHVGFMTGP FPGHDDWMPLRVFRFISRFAPAAPTRHG
Sequences:
>Translated_348_residues MSSASPPSPLAGPEEPASAARYRAPRWLPNSHAQTIFPALFGRRPAVAYRRERWDTPDGDFIDLDWLAHPAGAEPAPDAP LMVVFHGLEGNSDSRYALLLMAAARERGWHGVVPHFRSCSGELNRLPRFYHLADGAEVDWILRRLAAGRRGPVFAVGVSL GGNVLLHWLGERRGDRSIVTAAAAVSTPLDVHAGGRAISQGFSMVYTRSFLKTLKIKASAKLVQHPDLFDARRMLAARTM HEFDDIVTAPLHGFASADDYWTRATTRPLLRAIEIPTLLLNARNDPFLPASALPGPADVAPAVELDQPAHGGHVGFMTGP FPGHDDWMPLRVFRFISRFAPAAPTRHG >Mature_347_residues SSASPPSPLAGPEEPASAARYRAPRWLPNSHAQTIFPALFGRRPAVAYRRERWDTPDGDFIDLDWLAHPAGAEPAPDAPL MVVFHGLEGNSDSRYALLLMAAARERGWHGVVPHFRSCSGELNRLPRFYHLADGAEVDWILRRLAAGRRGPVFAVGVSLG GNVLLHWLGERRGDRSIVTAAAAVSTPLDVHAGGRAISQGFSMVYTRSFLKTLKIKASAKLVQHPDLFDARRMLAARTMH EFDDIVTAPLHGFASADDYWTRATTRPLLRAIEIPTLLLNARNDPFLPASALPGPADVAPAVELDQPAHGGHVGFMTGPF PGHDDWMPLRVFRFISRFAPAAPTRHG
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=350, Percent_Identity=29.1428571428571, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI194578891, Length=323, Percent_Identity=29.7213622291022, Blast_Score=135, Evalue=5e-32, Organism=Homo sapiens, GI23397659, Length=339, Percent_Identity=25.0737463126844, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI23397661, Length=339, Percent_Identity=25.0737463126844, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI269315865, Length=337, Percent_Identity=28.486646884273, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI1789752, Length=332, Percent_Identity=39.7590361445783, Blast_Score=232, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17566110, Length=311, Percent_Identity=28.6173633440514, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71985405, Length=312, Percent_Identity=27.8846153846154, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71985413, Length=195, Percent_Identity=27.6923076923077, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323866, Length=249, Percent_Identity=24.4979919678715, Blast_Score=90, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6319655, Length=292, Percent_Identity=26.3698630136986, Blast_Score=84, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6325162, Length=288, Percent_Identity=27.0833333333333, Blast_Score=80, Evalue=4e-16, Organism=Drosophila melanogaster, GI24652003, Length=331, Percent_Identity=31.4199395770393, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI281398151, Length=331, Percent_Identity=31.4199395770393, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24581365, Length=333, Percent_Identity=24.024024024024, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 38036; Mature: 37905
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSASPPSPLAGPEEPASAARYRAPRWLPNSHAQTIFPALFGRRPAVAYRRERWDTPDGD CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCC FIDLDWLAHPAGAEPAPDAPLMVVFHGLEGNSDSRYALLLMAAARERGWHGVVPHFRSCS EEEEHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEHEEHHHHHCCCCCCCCCHHHCC GELNRLPRFYHLADGAEVDWILRRLAAGRRGPVFAVGVSLGGNVLLHWLGERRGDRSIVT HHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHH AAAAVSTPLDVHAGGRAISQGFSMVYTRSFLKTLKIKASAKLVQHPDLFDARRMLAARTM HHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH HEFDDIVTAPLHGFASADDYWTRATTRPLLRAIEIPTLLLNARNDPFLPASALPGPADVA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCCCCCCCCCCC PAVELDQPAHGGHVGFMTGPFPGHDDWMPLRVFRFISRFAPAAPTRHG CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SSASPPSPLAGPEEPASAARYRAPRWLPNSHAQTIFPALFGRRPAVAYRRERWDTPDGD CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCC FIDLDWLAHPAGAEPAPDAPLMVVFHGLEGNSDSRYALLLMAAARERGWHGVVPHFRSCS EEEEHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEHEEHHHHHCCCCCCCCCHHHCC GELNRLPRFYHLADGAEVDWILRRLAAGRRGPVFAVGVSLGGNVLLHWLGERRGDRSIVT HHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHH AAAAVSTPLDVHAGGRAISQGFSMVYTRSFLKTLKIKASAKLVQHPDLFDARRMLAARTM HHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH HEFDDIVTAPLHGFASADDYWTRATTRPLLRAIEIPTLLLNARNDPFLPASALPGPADVA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCCCCCCCCCCC PAVELDQPAHGGHVGFMTGPFPGHDDWMPLRVFRFISRFAPAAPTRHG CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]