| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is purK [H]
Identifier: 238028509
GI number: 238028509
Start: 3367226
End: 3368419
Strand: Reverse
Name: purK [H]
Synonym: bglu_1g29730
Alternate gene names: 238028509
Gene position: 3368419-3367226 (Counterclockwise)
Preceding gene: 238028510
Following gene: 238028508
Centisome position: 86.23
GC content: 73.28
Gene sequence:
>1194_bases ATGACTGCACACTCCACTCCGGTTTCACCGATCCTGCCCGGCGCCTGGCTCGGCATGGTCGGCGGCGGCCAGCTCGGCCG CATGTTCTGCTTCGCGGCGCAGGCGATGGGCTATCGCGTCGCCGTGCTCGATCCCGACGCGGCAAGCCCCGCCGGCTCGG TGGCCGACCGCCACCTGCGCGCGGCCTACGACGACGAGGCGGCGCTCGCCGAACTCGCCGCGCTGTGCGCGGCCGTGTCG ACCGAATTCGAAAACGTGCCGGCCGCGAGCCTCGAGTTCCTGGCCCGCACCACCTTCGTCGCGCCGGCCGGGCGCTGCGT GGCGATCGCGCAGGACCGGATCGCCGAGAAGCGCTTCATCGCTGGCTCGGGCGTGCCGGTCGCGCCGCACGTCGTGATCG AATCGGCCGACGCGCTGGCCGCGCTTGGCGACGCCGAGCTCGACGCGGTGCTGCCCGGCATCCTGAAGACGGCGCGCCTG GGCTACGACGGCAAGGGCCAGGTGCGCGTGGCGACGGCCGCCGAGGTGCGCGCCGCGTTCGCCTCGCTGCGCGGCGTGCC GTGCGTGCTGGAGAAGCGCCTGGCGCTCAAGTACGAAGTGTCGGCGCTGATCGCGCGCGGCGTCGACGGCCGCTCGGCCG CGTTCCCGCTCGCGCAGAACACGCATCATCAAGGCATCCTGTCGCTGACGGTGGTGCCGGCGCCGGCCGCCGACGCCGCG CTGGCCGCCGCCGCGCAGCAGGCCGCGGTGCGGATCGCCGATTCGCTCGACTATGTCGGCGTGCTCTGCGTCGAGTTCTT CGTGCTGGAGGACGGCAGCCTGGTCGCCAATGAGATGGCGCCGCGCCCGCACAACTCCGGCCACTACACGGTCGATGCCT GTTCGGCCAGCCAGTTCGAGCAGCAGGTGCGCGCGATGACGCGGCTGCCGCTCGGCAACCCGCGCCAGCATTCGCCGGCG GCGATGCTGAACGTGCTCGGCGACATCTGGTTCGCCGACGGCGCGAGCGAGGCGGTCACGCCGCCGTGGGAGCGCGTGGC GGCGATGCCGGCCGCGCACCTGCACCTGTACGGCAAGCAAGAGGCGCGCGTGGGCCGCAAGATGGGCCACGTGAACTTCA CCGCCGAGACGCTCGACGCGGCGCTCGAGGCCGCGCACGACTGCGCGCGGCTGCTGCGCGTGCCGCTCGACTGA
Upstream 100 bases:
>100_bases AAGCCGCGCATGCGATGGTGCTGCCGCCGCTGTAAGCGGCGCGGCTCCCGAAGTCCCACGGCGGCGCGCCCGACGGCGCC CGCCGCGCTCGATCACTGAC
Downstream 100 bases:
>100_bases GGGGCGCGCCACGATGACTTCCGACGCCCGCCCGACGCCCGCCGGCAGCGCGCCCGACGCATCCGGCCCGCACGGCGTGC CGGCCGCGCGGATCGACGAG
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MTAHSTPVSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDAASPAGSVADRHLRAAYDDEAALAELAALCAAVS TEFENVPAASLEFLARTTFVAPAGRCVAIAQDRIAEKRFIAGSGVPVAPHVVIESADALAALGDAELDAVLPGILKTARL GYDGKGQVRVATAAEVRAAFASLRGVPCVLEKRLALKYEVSALIARGVDGRSAAFPLAQNTHHQGILSLTVVPAPAADAA LAAAAQQAAVRIADSLDYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACSASQFEQQVRAMTRLPLGNPRQHSPA AMLNVLGDIWFADGASEAVTPPWERVAAMPAAHLHLYGKQEARVGRKMGHVNFTAETLDAALEAAHDCARLLRVPLD
Sequences:
>Translated_397_residues MTAHSTPVSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDAASPAGSVADRHLRAAYDDEAALAELAALCAAVS TEFENVPAASLEFLARTTFVAPAGRCVAIAQDRIAEKRFIAGSGVPVAPHVVIESADALAALGDAELDAVLPGILKTARL GYDGKGQVRVATAAEVRAAFASLRGVPCVLEKRLALKYEVSALIARGVDGRSAAFPLAQNTHHQGILSLTVVPAPAADAA LAAAAQQAAVRIADSLDYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACSASQFEQQVRAMTRLPLGNPRQHSPA AMLNVLGDIWFADGASEAVTPPWERVAAMPAAHLHLYGKQEARVGRKMGHVNFTAETLDAALEAAHDCARLLRVPLD >Mature_396_residues TAHSTPVSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDAASPAGSVADRHLRAAYDDEAALAELAALCAAVST EFENVPAASLEFLARTTFVAPAGRCVAIAQDRIAEKRFIAGSGVPVAPHVVIESADALAALGDAELDAVLPGILKTARLG YDGKGQVRVATAAEVRAAFASLRGVPCVLEKRLALKYEVSALIARGVDGRSAAFPLAQNTHHQGILSLTVVPAPAADAAL AAAAQQAAVRIADSLDYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACSASQFEQQVRAMTRLPLGNPRQHSPAA MLNVLGDIWFADGASEAVTPPWERVAAMPAAHLHLYGKQEARVGRKMGHVNFTAETLDAALEAAHDCARLLRVPLD
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=372, Percent_Identity=34.9462365591398, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI1788155, Length=385, Percent_Identity=27.012987012987, Blast_Score=89, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6324702, Length=374, Percent_Identity=32.8877005347594, Blast_Score=201, Evalue=1e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 41488; Mature: 41357
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHSTPVSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDAASPAGSVADRHLR CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHH AAYDDEAALAELAALCAAVSTEFENVPAASLEFLARTTFVAPAGRCVAIAQDRIAEKRFI HHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHEE AGSGVPVAPHVVIESADALAALGDAELDAVLPGILKTARLGYDGKGQVRVATAAEVRAAF CCCCCCCCCHHEEECCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHH ASLRGVPCVLEKRLALKYEVSALIARGVDGRSAAFPLAQNTHHQGILSLTVVPAPAADAA HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHH LAAAAQQAAVRIADSLDYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACSASQFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCEEEEECCHHHHH QQVRAMTRLPLGNPRQHSPAAMLNVLGDIWFADGASEAVTPPWERVAAMPAAHLHLYGKQ HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHEEEECCH EARVGRKMGHVNFTAETLDAALEAAHDCARLLRVPLD HHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TAHSTPVSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDAASPAGSVADRHLR CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHH AAYDDEAALAELAALCAAVSTEFENVPAASLEFLARTTFVAPAGRCVAIAQDRIAEKRFI HHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHEE AGSGVPVAPHVVIESADALAALGDAELDAVLPGILKTARLGYDGKGQVRVATAAEVRAAF CCCCCCCCCHHEEECCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHH ASLRGVPCVLEKRLALKYEVSALIARGVDGRSAAFPLAQNTHHQGILSLTVVPAPAADAA HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHH LAAAAQQAAVRIADSLDYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACSASQFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCEEEEECCHHHHH QQVRAMTRLPLGNPRQHSPAAMLNVLGDIWFADGASEAVTPPWERVAAMPAAHLHLYGKQ HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHEEEECCH EARVGRKMGHVNFTAETLDAALEAAHDCARLLRVPLD HHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]