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The map label for this gene is ycjP [C]

Identifier: 238028483

GI number: 238028483

Start: 3335734

End: 3336591

Strand: Reverse

Name: ycjP [C]

Synonym: bglu_1g29470

Alternate gene names: 238028483

Gene position: 3336591-3335734 (Counterclockwise)

Preceding gene: 238028484

Following gene: 238028482

Centisome position: 85.41

GC content: 65.97

Gene sequence:

>858_bases
ATGAGCGACCTGACCGCAAACCGCGCCGCGGGCTCGCCGGGCGGCGCGTTCGGCACCGTGAAGCGCGCCATTCCCGGCGT
GCTCGCCTGGCTGATCGCGCTGCTGCTGTTCTTCCCGATCTTCTGGATGGCGATCACCGCGTTCAAGACCGAGCAGCAGG
CCTACTCGATGTCGCTGATCTTCACGCCGACGCTCGACAGCTTCCGCGAGGTGTTCGCACGCAGCAACTATTTCGGCTTC
GCCTGGAACTCGATCCTGGTCTCGGTCGGCGTGACGCTGCTGTGCCTGCTGCTCGCGGTGCCGGCCGCCTACGCGATGGC
GTTCTTCCCGAACCGCCGCACCCAGAAAGTGCTGCTGTGGATGCTGTCCACCAAGATGATGCCGTCGGTGGGCGTGCTGG
TGCCGATCTACCTGCTCTGGAAGAACTCGGGCCTGCTCGACACCGTGAGCGGCCTCGTCATCGTCTACACGCTGATCAAC
CTGCCGATCGCCGTGTGGATGACCTTCACCTACTTCGCCGAGATCCCGCGCGACATCCTGGAGGCGGGCCGCATCGACGG
CGCCACCACCTGGCAGGAGATCGTCTACCTGCTGATGCCGATGGCGCTGCCCGGCCTCGCGTCCACCGCGCTGCTGCTGG
TGATCCTGTCGTGGAACGAGGCGTTCTGGAGCATCAACCTGACGAGCTCGAACGCCGCGCCGCTGACCGTGTTCATCGCC
TCCTACTCGAGCCCCGAGGGGCTGTTCTGGGCCAAGCTGTCGGCGGCCTCGCTGCTGGCCGTGGCGCCGATCCTGATCGT
CGGCTGGCTGTCGCAGAAGCAACTGGTGCGCGGCCTCACGTTCGGAGCGGTCAAATGA

Upstream 100 bases:

>100_bases
TTGCCTCGGCGGGCGGCATCCTCGCCGTCGTGCTCGCGAACGTCGTGTCGTTCTTCCTGGTGAGGATGCTCGCGAAAAAC
CTCAAAGGGGAGTACGAAGC

Downstream 100 bases:

>100_bases
GCGCGAGCGACATGCGCCTGCCCGCCGGCGAGGGCCGCGACCGCCTGCTGATCTGCGATTGCGACGGCGTGCTGATCGAC
AGCGAGGCGGTGGCCGCGCG

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSDLTANRAAGSPGGAFGTVKRAIPGVLAWLIALLLFFPIFWMAITAFKTEQQAYSMSLIFTPTLDSFREVFARSNYFGF
AWNSILVSVGVTLLCLLLAVPAAYAMAFFPNRRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNSGLLDTVSGLVIVYTLIN
LPIAVWMTFTYFAEIPRDILEAGRIDGATTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLTSSNAAPLTVFIA
SYSSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK

Sequences:

>Translated_285_residues
MSDLTANRAAGSPGGAFGTVKRAIPGVLAWLIALLLFFPIFWMAITAFKTEQQAYSMSLIFTPTLDSFREVFARSNYFGF
AWNSILVSVGVTLLCLLLAVPAAYAMAFFPNRRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNSGLLDTVSGLVIVYTLIN
LPIAVWMTFTYFAEIPRDILEAGRIDGATTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLTSSNAAPLTVFIA
SYSSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK
>Mature_284_residues
SDLTANRAAGSPGGAFGTVKRAIPGVLAWLIALLLFFPIFWMAITAFKTEQQAYSMSLIFTPTLDSFREVFARSNYFGFA
WNSILVSVGVTLLCLLLAVPAAYAMAFFPNRRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNSGLLDTVSGLVIVYTLINL
PIAVWMTFTYFAEIPRDILEAGRIDGATTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLTSSNAAPLTVFIAS
YSSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=267, Percent_Identity=31.4606741573034, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1790464, Length=213, Percent_Identity=34.2723004694836, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31219; Mature: 31088

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLTANRAAGSPGGAFGTVKRAIPGVLAWLIALLLFFPIFWMAITAFKTEQQAYSMSLI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
FTPTLDSFREVFARSNYFGFAWNSILVSVGVTLLCLLLAVPAAYAMAFFPNRRTQKVLLW
EECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
MLSTKMMPSVGVLVPIYLLWKNSGLLDTVSGLVIVYTLINLPIAVWMTFTYFAEIPRDIL
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGRIDGATTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLTSSNAAPLTVFIA
HHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCEEEEEEECCCCCCCEEEEEE
SYSSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK
ECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDLTANRAAGSPGGAFGTVKRAIPGVLAWLIALLLFFPIFWMAITAFKTEQQAYSMSLI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
FTPTLDSFREVFARSNYFGFAWNSILVSVGVTLLCLLLAVPAAYAMAFFPNRRTQKVLLW
EECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
MLSTKMMPSVGVLVPIYLLWKNSGLLDTVSGLVIVYTLINLPIAVWMTFTYFAEIPRDIL
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGRIDGATTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLTSSNAAPLTVFIA
HHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCEEEEEEECCCCCCCEEEEEE
SYSSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK
ECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]