| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028470
Identifier: 238028470
GI number: 238028470
Start: 3321995
End: 3323341
Strand: Direct
Name: 238028470
Synonym: bglu_1g29340
Alternate gene names: NA
Gene position: 3321995-3323341 (Clockwise)
Preceding gene: 238028469
Following gene: 238028472
Centisome position: 85.04
GC content: 74.31
Gene sequence:
>1347_bases ATGGCTGACGGCAGCACGCAGCGCGACGCCGCGCGCACCATCAAGCACGACCGGGCGGCGCACGAGGCCGAACAGTTCGA CCTGTTCGGCGCGCCGCCGCCCGGGCCCGTGGCCGAGCCCGCCGCCGACGGCGGGCCGCCCGCCCCGGTCGCTCGCGGCC ATGCCGGTCATGCGGACGCCGCGCCTTGCGCCGCGGCCGGTTCGTCCACGCCCGGCGCCGCCTCGCGCCATACCGCGCCC GTCGGCAACGACACGGCGGCGCCCGCCTCGCTTTGGGGCGACGAGGCACTGCCCCCCCAGTCCATGGCCGCCGATACCGC CGCCGGCCCTGCCGCGGCGCCGCGCCGTTCGCGCAAGCGCGCCGTGGCGCGCGCCGCGATCAGCGACGAGCTTGCCGCGA TCGCGGCCGCGCTGCCGCCGAACCTGCGGCTCGGAACCTCGACTTGGTCGTTTCCGGGCTGGAACGGCATCGTCTATGGC GACGACTATTCGGCGCAGAAGCTTTCACGCGACGGGCTCGATGCCTACGGCGCGCATCCGCTGCTCAGGAGCGTCAGCAT CGACCGCTCGTTCTACGCGCCGCTGCCGATGGCCGACTATCTGCGCTATGCGCAGCAGGTACCCGACGATTTCCGCTTCG TCGTGAAGGCGCCGGCCTCGGTCACCGATGCCGTCGTGCGCGGCCCGCGCGGCGAGCCGGCCGGCCCGAATCCGGCGTTC CTCGACGCGCGCATCGCCACCGACGATTTCGTGCGCCCCTGTCTCGACGGGCTCGGCCGCAAGGCCGGCGCGCTGGTGTT CCAGTTCTCGCCGCTGCCCGACGCTCTGCTGGCCGACCCGGCCGCGCTGATCGAGCGGCTCGCGGCATTCTTCGCGGCGC TGCCGCCGCTGCCGGATGGAGGCGGCGAGGCCGACGGCCCACGCTACGCGATCGAGATCCGCGACGCGAGCCTGCTCACG CCGCGCTTCATCCGCACGCTCGCCGCGGCCGGCGTGCGCTACTGCGTCGGCCTGCACGCGCGGATGCCGGACCCGCTGCG GCAGGCGGCGGCGCTCGCGCTGCTCGACGGCGACGCGCCGGGCCCGCTGGTGGTGCGCTGGAGCCTGCACGGCGGCTTCA AGTACGAACAGGCGAAGGCGAAATACGATCCGTTCGACCGGCTCGTCGACGAGGACCCGCACACGCGCCACGCGCTCGCC GATCTGGCCGCGCGCTACGTGCTGGCCGGACAGCCGGTGCTCATCACCATCAACAACAAGGCGGAAGGCTCGGCGCCGCT GTCATGCATCGAGCTGGCCAAGGCGATCGGCGCGGCGCTCGAGCGGCTGCGCGCCGATCCGGCCTGA
Upstream 100 bases:
>100_bases GGCCGGCCGCAGCGCGACAACGCTGCCGTGGTCGCGACGCTACATGTACGAAAACCCGCTGCCGCGCTGACGGCGGCGCC CGACGACGCAATGAGCAGGC
Downstream 100 bases:
>100_bases GCGGACACCTTGGGCGCCGCCGCCCTGCGGCGAACCCGACGACAAAATGACAAGCGGCGGCACGTTCCTGTGCCGCCGCC GGTTACTGCGCCGCGTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MADGSTQRDAARTIKHDRAAHEAEQFDLFGAPPPGPVAEPAADGGPPAPVARGHAGHADAAPCAAAGSSTPGAASRHTAP VGNDTAAPASLWGDEALPPQSMAADTAAGPAAAPRRSRKRAVARAAISDELAAIAAALPPNLRLGTSTWSFPGWNGIVYG DDYSAQKLSRDGLDAYGAHPLLRSVSIDRSFYAPLPMADYLRYAQQVPDDFRFVVKAPASVTDAVVRGPRGEPAGPNPAF LDARIATDDFVRPCLDGLGRKAGALVFQFSPLPDALLADPAALIERLAAFFAALPPLPDGGGEADGPRYAIEIRDASLLT PRFIRTLAAAGVRYCVGLHARMPDPLRQAAALALLDGDAPGPLVVRWSLHGGFKYEQAKAKYDPFDRLVDEDPHTRHALA DLAARYVLAGQPVLITINNKAEGSAPLSCIELAKAIGAALERLRADPA
Sequences:
>Translated_448_residues MADGSTQRDAARTIKHDRAAHEAEQFDLFGAPPPGPVAEPAADGGPPAPVARGHAGHADAAPCAAAGSSTPGAASRHTAP VGNDTAAPASLWGDEALPPQSMAADTAAGPAAAPRRSRKRAVARAAISDELAAIAAALPPNLRLGTSTWSFPGWNGIVYG DDYSAQKLSRDGLDAYGAHPLLRSVSIDRSFYAPLPMADYLRYAQQVPDDFRFVVKAPASVTDAVVRGPRGEPAGPNPAF LDARIATDDFVRPCLDGLGRKAGALVFQFSPLPDALLADPAALIERLAAFFAALPPLPDGGGEADGPRYAIEIRDASLLT PRFIRTLAAAGVRYCVGLHARMPDPLRQAAALALLDGDAPGPLVVRWSLHGGFKYEQAKAKYDPFDRLVDEDPHTRHALA DLAARYVLAGQPVLITINNKAEGSAPLSCIELAKAIGAALERLRADPA >Mature_447_residues ADGSTQRDAARTIKHDRAAHEAEQFDLFGAPPPGPVAEPAADGGPPAPVARGHAGHADAAPCAAAGSSTPGAASRHTAPV GNDTAAPASLWGDEALPPQSMAADTAAGPAAAPRRSRKRAVARAAISDELAAIAAALPPNLRLGTSTWSFPGWNGIVYGD DYSAQKLSRDGLDAYGAHPLLRSVSIDRSFYAPLPMADYLRYAQQVPDDFRFVVKAPASVTDAVVRGPRGEPAGPNPAFL DARIATDDFVRPCLDGLGRKAGALVFQFSPLPDALLADPAALIERLAAFFAALPPLPDGGGEADGPRYAIEIRDASLLTP RFIRTLAAAGVRYCVGLHARMPDPLRQAAALALLDGDAPGPLVVRWSLHGGFKYEQAKAKYDPFDRLVDEDPHTRHALAD LAARYVLAGQPVLITINNKAEGSAPLSCIELAKAIGAALERLRADPA
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46748; Mature: 46617
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGSTQRDAARTIKHDRAAHEAEQFDLFGAPPPGPVAEPAADGGPPAPVARGHAGHADA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APCAAAGSSTPGAASRHTAPVGNDTAAPASLWGDEALPPQSMAADTAAGPAAAPRRSRKR CCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHH AVARAAISDELAAIAAALPPNLRLGTSTWSFPGWNGIVYGDDYSAQKLSRDGLDAYGAHP HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEECCCCCHHHHHHCCCCHHCCCH LLRSVSIDRSFYAPLPMADYLRYAQQVPDDFRFVVKAPASVTDAVVRGPRGEPAGPNPAF HHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHEEEEECCCHHHHHHHCCCCCCCCCCCCCE LDARIATDDFVRPCLDGLGRKAGALVFQFSPLPDALLADPAALIERLAAFFAALPPLPDG EEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHCCCCCCC GGEADGPRYAIEIRDASLLTPRFIRTLAAAGVRYCVGLHARMPDPLRQAAALALLDGDAP CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCC GPLVVRWSLHGGFKYEQAKAKYDPFDRLVDEDPHTRHALADLAARYVLAGQPVLITINNK CCEEEEEECCCCCEEHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC AEGSAPLSCIELAKAIGAALERLRADPA CCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADGSTQRDAARTIKHDRAAHEAEQFDLFGAPPPGPVAEPAADGGPPAPVARGHAGHADA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APCAAAGSSTPGAASRHTAPVGNDTAAPASLWGDEALPPQSMAADTAAGPAAAPRRSRKR CCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHH AVARAAISDELAAIAAALPPNLRLGTSTWSFPGWNGIVYGDDYSAQKLSRDGLDAYGAHP HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEECCCCCHHHHHHCCCCHHCCCH LLRSVSIDRSFYAPLPMADYLRYAQQVPDDFRFVVKAPASVTDAVVRGPRGEPAGPNPAF HHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHEEEEECCCHHHHHHHCCCCCCCCCCCCCE LDARIATDDFVRPCLDGLGRKAGALVFQFSPLPDALLADPAALIERLAAFFAALPPLPDG EEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHCCCCCCC GGEADGPRYAIEIRDASLLTPRFIRTLAAAGVRYCVGLHARMPDPLRQAAALALLDGDAP CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCC GPLVVRWSLHGGFKYEQAKAKYDPFDRLVDEDPHTRHALADLAARYVLAGQPVLITINNK CCEEEEEECCCCCEEHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC AEGSAPLSCIELAKAIGAALERLRADPA CCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA