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The map label for this gene is ybbN [H]

Identifier: 238028466

GI number: 238028466

Start: 3318070

End: 3318918

Strand: Direct

Name: ybbN [H]

Synonym: bglu_1g29300

Alternate gene names: 238028466

Gene position: 3318070-3318918 (Clockwise)

Preceding gene: 238028465

Following gene: 238028468

Centisome position: 84.94

GC content: 68.67

Gene sequence:

>849_bases
ATGGAAACCACGCTCGCCACCTTCGAACGCGACGTCATCGAAGCATCGCTCGACGTCCCGGTACTCGTCGACTTCTGGGC
GCCCTGGTGCGGCCCGTGCAAGACGCTCGGTCCGCTGCTCGAACGCATCGAGGCCGACTACGCGGGGCGCTGGAAACTCG
TCAAGGTCAACGTCGACGAGAACCCGGAACTCTCCGCGCATTTCCAGACCCGCAGCATCCCGCACGTGATCGCGTTCGCC
GACGGCCGCGCCGTCGACCAGTTCGTCGGCGTGCTGCCCGAAGGCCAGATCCGCGCCTTCATCGACCGCCTGCTGCCGTC
GCCCGACGATGCCGAGCGCCGCGCCGCGCAGATCGCGCTGGCCGAGGAGCGCTACGACGACGCCATCAAGCATCTGCAGG
CCGCGCTCGCGCTGAACCCGGGCCAGGACGACATTCGCCTGGACCTGATCGAACTGCTGCTGGCCGTCGATCGCGTCGAC
GCCGCGCGCGACGAGGCCACGCGGCTCTCGCCGCAGACCGTAAACGGCGTGGACCCGCGCTACCAGGCGATCAAGACGCG
CTTCGATTCGCTCGACGCCGCCGTCGAGCTGCCGCCGACCGATGCGCTGGAGGCCCGCATCGCCGCCGACGGCAACGATC
TCGAGGCGCGCTTCGATCTCGCCCAGCTGCTGATCGCGCACCGCGTCTACGAAGGTGCGCTCGAACAGTTGCTCGAGATC
GTCAAGCGCGACCGGACGTTCAAGGACGACGTCGGCCGCAAGACCATGGTGTCGGTGTTCGAGCTGGCGGCCGACCAGCC
GAACCTGGTCGCCGCGTGGCGCCGCAAGCTCAGCGCGCTGCTCTACTGA

Upstream 100 bases:

>100_bases
CCCGGGGGCGCGCCGGCGGCCTGCGGCGGCCGGCGCGCCCGCATTGAAAGACCCGGCTTCGGCCCCATCTACGTGATTAT
TCCGATCCACGAGGACCCCC

Downstream 100 bases:

>100_bases
GGCCGCGGCGCGGGCGGCCGGCGCCTACCGCGGCGCGCCCACCGCGAGCGCGCGCAGGGCGTGCGCGGCGGCGGCGAACC
CGAAGCTCGCCGTCACGCAC

Product: Thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
METTLATFERDVIEASLDVPVLVDFWAPWCGPCKTLGPLLERIEADYAGRWKLVKVNVDENPELSAHFQTRSIPHVIAFA
DGRAVDQFVGVLPEGQIRAFIDRLLPSPDDAERRAAQIALAEERYDDAIKHLQAALALNPGQDDIRLDLIELLLAVDRVD
AARDEATRLSPQTVNGVDPRYQAIKTRFDSLDAAVELPPTDALEARIAADGNDLEARFDLAQLLIAHRVYEGALEQLLEI
VKRDRTFKDDVGRKTMVSVFELAADQPNLVAAWRRKLSALLY

Sequences:

>Translated_282_residues
METTLATFERDVIEASLDVPVLVDFWAPWCGPCKTLGPLLERIEADYAGRWKLVKVNVDENPELSAHFQTRSIPHVIAFA
DGRAVDQFVGVLPEGQIRAFIDRLLPSPDDAERRAAQIALAEERYDDAIKHLQAALALNPGQDDIRLDLIELLLAVDRVD
AARDEATRLSPQTVNGVDPRYQAIKTRFDSLDAAVELPPTDALEARIAADGNDLEARFDLAQLLIAHRVYEGALEQLLEI
VKRDRTFKDDVGRKTMVSVFELAADQPNLVAAWRRKLSALLY
>Mature_282_residues
METTLATFERDVIEASLDVPVLVDFWAPWCGPCKTLGPLLERIEADYAGRWKLVKVNVDENPELSAHFQTRSIPHVIAFA
DGRAVDQFVGVLPEGQIRAFIDRLLPSPDDAERRAAQIALAEERYDDAIKHLQAALALNPGQDDIRLDLIELLLAVDRVD
AARDEATRLSPQTVNGVDPRYQAIKTRFDSLDAAVELPPTDALEARIAADGNDLEARFDLAQLLIAHRVYEGALEQLLEI
VKRDRTFKDDVGRKTMVSVFELAADQPNLVAAWRRKLSALLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI21361403, Length=98, Percent_Identity=39.7959183673469, Blast_Score=88, Evalue=7e-18,
Organism=Escherichia coli, GI87081747, Length=275, Percent_Identity=32.7272727272727, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI87082331, Length=96, Percent_Identity=40.625, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1788936, Length=88, Percent_Identity=39.7727272727273, Blast_Score=89, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI212646193, Length=98, Percent_Identity=42.8571428571429, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28573567, Length=105, Percent_Identity=36.1904761904762, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24664269, Length=112, Percent_Identity=30.3571428571429, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI21358065, Length=82, Percent_Identity=41.4634146341463, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24639826, Length=71, Percent_Identity=38.0281690140845, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24639068, Length=96, Percent_Identity=37.5, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31488; Mature: 31488

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTLATFERDVIEASLDVPVLVDFWAPWCGPCKTLGPLLERIEADYAGRWKLVKVNVDE
CCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCC
NPELSAHFQTRSIPHVIAFADGRAVDQFVGVLPEGQIRAFIDRLLPSPDDAERRAAQIAL
CCCCEEEEECCCCCEEEEECCCCHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
AEERYDDAIKHLQAALALNPGQDDIRLDLIELLLAVDRVDAARDEATRLSPQTVNGVDPR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
YQAIKTRFDSLDAAVELPPTDALEARIAADGNDLEARFDLAQLLIAHRVYEGALEQLLEI
HHHHHHHHHHHCCEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKRDRTFKDDVGRKTMVSVFELAADQPNLVAAWRRKLSALLY
HHHCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
METTLATFERDVIEASLDVPVLVDFWAPWCGPCKTLGPLLERIEADYAGRWKLVKVNVDE
CCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCC
NPELSAHFQTRSIPHVIAFADGRAVDQFVGVLPEGQIRAFIDRLLPSPDDAERRAAQIAL
CCCCEEEEECCCCCEEEEECCCCHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
AEERYDDAIKHLQAALALNPGQDDIRLDLIELLLAVDRVDAARDEATRLSPQTVNGVDPR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
YQAIKTRFDSLDAAVELPPTDALEARIAADGNDLEARFDLAQLLIAHRVYEGALEQLLEI
HHHHHHHHHHHCCEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKRDRTFKDDVGRKTMVSVFELAADQPNLVAAWRRKLSALLY
HHHCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]