Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028431

Identifier: 238028431

GI number: 238028431

Start: 3281101

End: 3281610

Strand: Direct

Name: 238028431

Synonym: bglu_1g28950

Alternate gene names: NA

Gene position: 3281101-3281610 (Clockwise)

Preceding gene: 238028430

Following gene: 238028432

Centisome position: 83.99

GC content: 66.27

Gene sequence:

>510_bases
GTGCGACTCTTTCCGCGCCCCACGCTCGCCCGCCTCGTGCGGACCGCCGTGTTCCCCGTCGCGCTCGCGCTTGCCGCGGG
CGGCCTCGCGCCCGCGTTCGCGCAATCGAACGGCATCCCGCCGGGCGCCAAGCAGCCGAGCGAGTTTGCGCACACCAAGC
TGCGCGTGGGCATGTACGTGATCGACGCGGCGATCGCCGCCAACGACGCGGACCGCGAGCAGGGGCTCATGTATCGCAGC
CAGCTCGCGCCGAACGAGGGCATGCTGTTCGTATTCGGCGAGAACGCCGTGCATTGCTTCTGGATGAAGAACACGCTGAT
CCCGCTGTCGATCGCATTCATGCGCGCCGACGGCACGATCACCGACATCGACGAAATGCGCGCCGAGACCACCGACAATC
ATTGTCCGCGCAACAATGGCGTCTACGCGCTAGAAATGAGCAAGGGCTGGTTCCAGGCCAAGGGCATCAAGCCCGGCATG
AAGATCGACGGGCTGCCGGCACCGCAGTAA

Upstream 100 bases:

>100_bases
TTTCTTTTTGCCCCGTCATCCGGCCGTCATTGCCTTGCTGCACCGGAGCGCGCGCATCGCGTACCATGCAGCCCTCGATT
ACCCGATCAGGAGCTTCGTC

Downstream 100 bases:

>100_bases
GCGGCCCGACGGAACGCGCGCCGCCCGTGGCTGACGGCACTTGATATCCGGCACGCGCGCAAGCGCGGCCGATCCGGCCC
CGCATGGCGAATCAGCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide Protein; Lipoprotein; Secreted Protein

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MRLFPRPTLARLVRTAVFPVALALAAGGLAPAFAQSNGIPPGAKQPSEFAHTKLRVGMYVIDAAIAANDADREQGLMYRS
QLAPNEGMLFVFGENAVHCFWMKNTLIPLSIAFMRADGTITDIDEMRAETTDNHCPRNNGVYALEMSKGWFQAKGIKPGM
KIDGLPAPQ

Sequences:

>Translated_169_residues
MRLFPRPTLARLVRTAVFPVALALAAGGLAPAFAQSNGIPPGAKQPSEFAHTKLRVGMYVIDAAIAANDADREQGLMYRS
QLAPNEGMLFVFGENAVHCFWMKNTLIPLSIAFMRADGTITDIDEMRAETTDNHCPRNNGVYALEMSKGWFQAKGIKPGM
KIDGLPAPQ
>Mature_169_residues
MRLFPRPTLARLVRTAVFPVALALAAGGLAPAFAQSNGIPPGAKQPSEFAHTKLRVGMYVIDAAIAANDADREQGLMYRS
QLAPNEGMLFVFGENAVHCFWMKNTLIPLSIAFMRADGTITDIDEMRAETTDNHCPRNNGVYALEMSKGWFQAKGIKPGM
KIDGLPAPQ

Specific function: Unknown

COG id: COG1430

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18376; Mature: 18376

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFPRPTLARLVRTAVFPVALALAAGGLAPAFAQSNGIPPGAKQPSEFAHTKLRVGMYV
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHE
IDAAIAANDADREQGLMYRSQLAPNEGMLFVFGENAVHCFWMKNTLIPLSIAFMRADGTI
EHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEECCCCE
TDIDEMRAETTDNHCPRNNGVYALEMSKGWFQAKGIKPGMKIDGLPAPQ
ECHHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCCCEECCCCCCC
>Mature Secondary Structure
MRLFPRPTLARLVRTAVFPVALALAAGGLAPAFAQSNGIPPGAKQPSEFAHTKLRVGMYV
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHE
IDAAIAANDADREQGLMYRSQLAPNEGMLFVFGENAVHCFWMKNTLIPLSIAFMRADGTI
EHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEECCCCE
TDIDEMRAETTDNHCPRNNGVYALEMSKGWFQAKGIKPGMKIDGLPAPQ
ECHHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA