| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is mco [H]
Identifier: 238028420
GI number: 238028420
Start: 3268214
End: 3269809
Strand: Reverse
Name: mco [H]
Synonym: bglu_1g28840
Alternate gene names: 238028420
Gene position: 3269809-3268214 (Counterclockwise)
Preceding gene: 238028421
Following gene: 238028418
Centisome position: 83.7
GC content: 72.99
Gene sequence:
>1596_bases ATGATACGCAGGCAATTTCTCCGCCGCGCGCTCGGCGCGGCGGCTTCGCTCGCCTTCGCGCGCGGCGCGCTCGCGAAGGT GCCGGCGGCGGAGGCGCCGCATGCCATGGAGCAGATGAGCGGCATGGCGGGCATGCATGCGGCGCCGGACGCGGCGGGGC CCGCCGGTGGCGGCACGCTCGCGGCTGCCGACGCGCTGCCGGCCGGCGCGCCGCTCGCGCCGCTGCGCGTGCTCGCCAAC GAGAGCACGACGCCGGGGCAATTCCGCGCGACGCTCGTGGCGCAGCCGGTCGCGCGGCAGCTATTGCCCGGCGCGGCACC CACCGGCATGTGGCTCTACGGCGACGCGGCGACGGGTGCCGTGGTGGGGCCGCTGATCGAGCTGCACGAGGGCGACGCCG TCGAGATCCGTGTCGTCAACCACCTGCCGCAGCCGACCACGGTCCACTGGCATGGCCTGCCGGTGCCGCCCGACCAGGAC GGCAACCCGCTCGCGCTGATCGCGCCCGGCGCTTCGCGCACCTATCGCTTCACGTTGCCGAAAGGCAGCGCCGGCACCTA CTGGTATCACCCTCATCCGCACATGATGACGGCCGAGCAGGTGTTTCGCGGCCTGGCCGGGCCGCTCGTGGTGCGCGCGG CCGACGATCCGCTCGCCGGCTGGCCCGAGCGCCAGCTGTTCGTGTCGGACCTGAAGCTGGCGGCCGATGGCGCGATCGCC CCGAACGACATGATGGACTGGATGAACGGCCGCGAAGGCCAGTTCGTGCTGGTCAACGGCGCGCGCCGCCCGCGCCTGGA GGTGGCAGGCGACGAGCGCTGGCGTGTCTGGAACGGCTGCAGCGCGCGCTTCCTGAACCTGTGCTTCGACGACGGCCGCG CCTTCGAACAGGTCGGCACCGACGGTGGCCTGTTCGAGCGGCCGCGCCGCGTGACCGCGCTGCTGCTCGCGCCGGGCGAG CGCGCCGAATTGCTGGTGCGCGCCGGCGAGCATGCCTCGCGCGCGGTGCTGCGCGCGGCCACCTACGACCGCAGCAAGAT GGCCATGGCCATGTCGGCCGACGAGGATGCCTCGCTGCCGCCCGATCCGCCGCTTCCGCTCGCGGACCTCAGCTTCGCGC CGGCGCCGGCGCGCGAGGTGCCCGCCGCGCTGCGCGCGGTGCCGGCGCTCGGCACGCCGGTGGCGCGCAAGTCGGTTACG TTCGGCGAGGCGATGGACATGGACGCGATGATGGCCTCGGCGCCGGGCACCCGCCCGGCCGGCATGCGCTTCCTCGTGAA CGGGCAGACCTGGTCGCCGCATCGCGCGACGCTCACGAGCCGGCGCGGCGAGGTCGAACTGTGGACCATCACCAACACCA CCGACATGGACCACCCGTTCCATCTGCACGGCACGCAGTTCCAGGTGCTCGAGCGCGAACTGCGCGGGCAGCGCACGCCG GAGCCGTTCCGCGCCTGGCGCGACACCGTCAACGTCAGGAAGGGCGAGACGGTGCGGATCGCCACGGTCCAGCACCAGGC CGGCGAGCGGATGTTCCACTGCCATATCCTCGAACACGAGGATCTCGGCATGATGGGCACCTTGAAGGTCGTCTGA
Upstream 100 bases:
>100_bases TTCCGCAAGCTCGCCGTCTGACGCGAAACGGCGCGTGCGCCGCTGCAGCGGTGCACGCGCCGGTGTATCGTCATCGCTTC GCTGACAGGGGAGTCGATCG
Downstream 100 bases:
>100_bases GGCGCGGCGGCCGAGCATGGCCGCCGCCGAACGGCGAAGAGGCCGACGCCGATGGGGCCGGCGAAAAAAAACCCGGCTCG GAGCCGGGTTTTTATCGAGA
Product: multicopper oxidase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MIRRQFLRRALGAAASLAFARGALAKVPAAEAPHAMEQMSGMAGMHAAPDAAGPAGGGTLAAADALPAGAPLAPLRVLAN ESTTPGQFRATLVAQPVARQLLPGAAPTGMWLYGDAATGAVVGPLIELHEGDAVEIRVVNHLPQPTTVHWHGLPVPPDQD GNPLALIAPGASRTYRFTLPKGSAGTYWYHPHPHMMTAEQVFRGLAGPLVVRAADDPLAGWPERQLFVSDLKLAADGAIA PNDMMDWMNGREGQFVLVNGARRPRLEVAGDERWRVWNGCSARFLNLCFDDGRAFEQVGTDGGLFERPRRVTALLLAPGE RAELLVRAGEHASRAVLRAATYDRSKMAMAMSADEDASLPPDPPLPLADLSFAPAPAREVPAALRAVPALGTPVARKSVT FGEAMDMDAMMASAPGTRPAGMRFLVNGQTWSPHRATLTSRRGEVELWTITNTTDMDHPFHLHGTQFQVLERELRGQRTP EPFRAWRDTVNVRKGETVRIATVQHQAGERMFHCHILEHEDLGMMGTLKVV
Sequences:
>Translated_531_residues MIRRQFLRRALGAAASLAFARGALAKVPAAEAPHAMEQMSGMAGMHAAPDAAGPAGGGTLAAADALPAGAPLAPLRVLAN ESTTPGQFRATLVAQPVARQLLPGAAPTGMWLYGDAATGAVVGPLIELHEGDAVEIRVVNHLPQPTTVHWHGLPVPPDQD GNPLALIAPGASRTYRFTLPKGSAGTYWYHPHPHMMTAEQVFRGLAGPLVVRAADDPLAGWPERQLFVSDLKLAADGAIA PNDMMDWMNGREGQFVLVNGARRPRLEVAGDERWRVWNGCSARFLNLCFDDGRAFEQVGTDGGLFERPRRVTALLLAPGE RAELLVRAGEHASRAVLRAATYDRSKMAMAMSADEDASLPPDPPLPLADLSFAPAPAREVPAALRAVPALGTPVARKSVT FGEAMDMDAMMASAPGTRPAGMRFLVNGQTWSPHRATLTSRRGEVELWTITNTTDMDHPFHLHGTQFQVLERELRGQRTP EPFRAWRDTVNVRKGETVRIATVQHQAGERMFHCHILEHEDLGMMGTLKVV >Mature_531_residues MIRRQFLRRALGAAASLAFARGALAKVPAAEAPHAMEQMSGMAGMHAAPDAAGPAGGGTLAAADALPAGAPLAPLRVLAN ESTTPGQFRATLVAQPVARQLLPGAAPTGMWLYGDAATGAVVGPLIELHEGDAVEIRVVNHLPQPTTVHWHGLPVPPDQD GNPLALIAPGASRTYRFTLPKGSAGTYWYHPHPHMMTAEQVFRGLAGPLVVRAADDPLAGWPERQLFVSDLKLAADGAIA PNDMMDWMNGREGQFVLVNGARRPRLEVAGDERWRVWNGCSARFLNLCFDDGRAFEQVGTDGGLFERPRRVTALLLAPGE RAELLVRAGEHASRAVLRAATYDRSKMAMAMSADEDASLPPDPPLPLADLSFAPAPAREVPAALRAVPALGTPVARKSVT FGEAMDMDAMMASAPGTRPAGMRFLVNGQTWSPHRATLTSRRGEVELWTITNTTDMDHPFHLHGTQFQVLERELRGQRTP EPFRAWRDTVNVRKGETVRIATVQHQAGERMFHCHILEHEDLGMMGTLKVV
Specific function: May be involved in copper homeostasis and oxidative stress response [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1786314, Length=457, Percent_Identity=33.0415754923414, Blast_Score=201, Evalue=1e-52, Organism=Escherichia coli, GI1789394, Length=430, Percent_Identity=29.3023255813954, Blast_Score=122, Evalue=4e-29, Organism=Drosophila melanogaster, GI24650186, Length=544, Percent_Identity=23.8970588235294, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI18859919, Length=502, Percent_Identity=24.7011952191235, Blast_Score=90, Evalue=4e-18,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR002355 - InterPro: IPR008972 [H]
Pfam domain/function: PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 57202; Mature: 57202
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRQFLRRALGAAASLAFARGALAKVPAAEAPHAMEQMSGMAGMHAAPDAAGPAGGGTL CCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCE AAADALPAGAPLAPLRVLANESTTPGQFRATLVAQPVARQLLPGAAPTGMWLYGDAATGA EECCCCCCCCCCCHHHEEECCCCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEECCCCCH VVGPLIELHEGDAVEIRVVNHLPQPTTVHWHGLPVPPDQDGNPLALIAPGASRTYRFTLP HHHHHHEECCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECC KGSAGTYWYHPHPHMMTAEQVFRGLAGPLVVRAADDPLAGWPERQLFVSDLKLAADGAIA CCCCCCEEECCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCHHEEHHHHHEECCCCCC PNDMMDWMNGREGQFVLVNGARRPRLEVAGDERWRVWNGCSARFLNLCFDDGRAFEQVGT CHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCEEEECCCCHHEEEEECCCCCHHHHCCC DGGLFERPRRVTALLLAPGERAELLVRAGEHASRAVLRAATYDRSKMAMAMSADEDASLP CCCHHCCCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCC PDPPLPLADLSFAPAPAREVPAALRAVPALGTPVARKSVTFGEAMDMDAMMASAPGTRPA CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCC GMRFLVNGQTWSPHRATLTSRRGEVELWTITNTTDMDHPFHLHGTQFQVLERELRGQRTP CEEEEEECCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCC EPFRAWRDTVNVRKGETVRIATVQHQAGERMFHCHILEHEDLGMMGTLKVV HHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEC >Mature Secondary Structure MIRRQFLRRALGAAASLAFARGALAKVPAAEAPHAMEQMSGMAGMHAAPDAAGPAGGGTL CCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCE AAADALPAGAPLAPLRVLANESTTPGQFRATLVAQPVARQLLPGAAPTGMWLYGDAATGA EECCCCCCCCCCCHHHEEECCCCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEECCCCCH VVGPLIELHEGDAVEIRVVNHLPQPTTVHWHGLPVPPDQDGNPLALIAPGASRTYRFTLP HHHHHHEECCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECC KGSAGTYWYHPHPHMMTAEQVFRGLAGPLVVRAADDPLAGWPERQLFVSDLKLAADGAIA CCCCCCEEECCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCHHEEHHHHHEECCCCCC PNDMMDWMNGREGQFVLVNGARRPRLEVAGDERWRVWNGCSARFLNLCFDDGRAFEQVGT CHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCEEEECCCCHHEEEEECCCCCHHHHCCC DGGLFERPRRVTALLLAPGERAELLVRAGEHASRAVLRAATYDRSKMAMAMSADEDASLP CCCHHCCCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCC PDPPLPLADLSFAPAPAREVPAALRAVPALGTPVARKSVTFGEAMDMDAMMASAPGTRPA CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCC GMRFLVNGQTWSPHRATLTSRRGEVELWTITNTTDMDHPFHLHGTQFQVLERELRGQRTP CEEEEEECCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCC EPFRAWRDTVNVRKGETVRIATVQHQAGERMFHCHILEHEDLGMMGTLKVV HHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA