| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028367
Identifier: 238028367
GI number: 238028367
Start: 3208386
End: 3209846
Strand: Reverse
Name: 238028367
Synonym: bglu_1g28280
Alternate gene names: NA
Gene position: 3209846-3208386 (Counterclockwise)
Preceding gene: 238028368
Following gene: 238028365
Centisome position: 82.17
GC content: 77.14
Gene sequence:
>1461_bases ATGCCCGACACCAACCGCGAGTTCGACATTCCTGTTCTGACCGATGTGCTGGTGCCCGGCAAGTCCGTGCCGGCCAGCTC CGCGACCCCGACTCCGACGCCCGCGCCGCGTGCCGACGGCCTTCCCGTCCTGCAGCCGCAAGCCGCCCCCGAAACGGCCG GCTCCGGGCTGCCGCCCGCCGAGACCCACGCGCCGCTGTCGACGGCCTATGACGCGCCGGCCGGCGCGGCCGGCGCCGAT GCGCTGCCGGTAGCGAGGCTGGCGCCCGGGCCGGACGAGACGCGGCTGCGGCAAGCGCGGCCGCCCGCTGCGGACGGCGC GCTTGGCGAGGCTGGCGAGGTGCCCGCCGCGCCGGCCGAGCCGCATGCACCCGCGCCAGCGGCCGGCGCGGCCGCCCCCG ACGTTCCCGACGTTCCCGACGTTCCCGCGCCGTTCGTTGCGCCGGAGCCGGCGGTGCCGCACGAACTGGCCGGCGCGCCG CAACCGGAGCCGGCTGCCGATCCGGAACTGAATGCATCGGGGGCGCGGTTCGCCTCGCCTGACACGGCGGCGCGGCCGCA ATCGGCCGAGGCGGCCCCGGCGTCCGACGTGCCCGACGCGCCTTTCGCGCCCGAGCCGGCGACGCCGCAGGCATCTACCG CTGCGCCCGAGCCGGTTGCCGCGCCCGAGGAGGCGCGCGCGCCATTGACGCCGCCCGCTCATAGCGGGCTCAGTGACGCG GAGGCAGCGTTCGTCGCGCCCGAGCCTGCCGTGGCGCCGGAATTCGCGGCAATGCCGGAGCCGCTTGCTGCACCGCAGCC CGGCGTGGCATCCGTGACATCGCCGCCGGCCGCCGCGCCGCATGAGGCGGGCGCCGCGCCACTGGTTGGCGACGACGAGC ATGACGCCCCGGACGATGGCTCGCTCGCCTACGCGCTGGCCGATCCGGAACAGGCTGCCGAGCAGCGCGACGCCGGGCCG GTCGCTGCCGGCGGTCGCGACGCTTCCGGCATCGCCGCCGCCGTCGACGCGCCGGCCGACAGCGACGTCGTGGCCCGCAC CGAGTCGGCGCTGCACGCGATCGAGGCGATGCCGCCCGCCGCATTCGCCGAACTGACGCCGTTCGGCGCCGACGAGCCGA TGCCGGCGCGTTTCGCCGATCAGGAGGCGCCGCCGCCCGCCGAGTTGCAGCACGGCGCACCCGAGCCCTTGCCGGTCGCG GCGGCGCCCGCGCCGGTGGCGCCCGCCGTCGATGCGCGGCGCCTCGCCGAGCGGCTGCACGGCCGCGTTGCCGGCTATCT GGCAGGCGAAGGTCGCGCGCTGATCGACGCACGCTGTCGCGAGCTGGTCCAGCAGCACGCGGCGGCGCTCGCGGAAGAAG TCTCGCAGCAGGTGCTGCTGGCGCTCGCGCCTGAAATCGAGCAGTGGGTGAGCGAGGCGGTCGGCGAGGCGCTCGCGGAT CACCCGCCGCCGCCGGCGTGA
Upstream 100 bases:
>100_bases GGAACTGGCGGCCGGCCGCGATCGCTATCGTTTCTATCGCGATCGCGGCTATGCGCTGAACAACTACAAGCAGGGCGGCT GACCCGCGCCCGGAGGCAAC
Downstream 100 bases:
>100_bases AGCCATGTGATCGAGGCGCGGGCGGCGAGGCCCGCGCACTCGGCGGATCATGGCCGATGCCGCACCTGCCCCGCCAGCGG CGGCGCCGGTGCGGGGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MPDTNREFDIPVLTDVLVPGKSVPASSATPTPTPAPRADGLPVLQPQAAPETAGSGLPPAETHAPLSTAYDAPAGAAGAD ALPVARLAPGPDETRLRQARPPAADGALGEAGEVPAAPAEPHAPAPAAGAAAPDVPDVPDVPAPFVAPEPAVPHELAGAP QPEPAADPELNASGARFASPDTAARPQSAEAAPASDVPDAPFAPEPATPQASTAAPEPVAAPEEARAPLTPPAHSGLSDA EAAFVAPEPAVAPEFAAMPEPLAAPQPGVASVTSPPAAAPHEAGAAPLVGDDEHDAPDDGSLAYALADPEQAAEQRDAGP VAAGGRDASGIAAAVDAPADSDVVARTESALHAIEAMPPAAFAELTPFGADEPMPARFADQEAPPPAELQHGAPEPLPVA AAPAPVAPAVDARRLAERLHGRVAGYLAGEGRALIDARCRELVQQHAAALAEEVSQQVLLALAPEIEQWVSEAVGEALAD HPPPPA
Sequences:
>Translated_486_residues MPDTNREFDIPVLTDVLVPGKSVPASSATPTPTPAPRADGLPVLQPQAAPETAGSGLPPAETHAPLSTAYDAPAGAAGAD ALPVARLAPGPDETRLRQARPPAADGALGEAGEVPAAPAEPHAPAPAAGAAAPDVPDVPDVPAPFVAPEPAVPHELAGAP QPEPAADPELNASGARFASPDTAARPQSAEAAPASDVPDAPFAPEPATPQASTAAPEPVAAPEEARAPLTPPAHSGLSDA EAAFVAPEPAVAPEFAAMPEPLAAPQPGVASVTSPPAAAPHEAGAAPLVGDDEHDAPDDGSLAYALADPEQAAEQRDAGP VAAGGRDASGIAAAVDAPADSDVVARTESALHAIEAMPPAAFAELTPFGADEPMPARFADQEAPPPAELQHGAPEPLPVA AAPAPVAPAVDARRLAERLHGRVAGYLAGEGRALIDARCRELVQQHAAALAEEVSQQVLLALAPEIEQWVSEAVGEALAD HPPPPA >Mature_485_residues PDTNREFDIPVLTDVLVPGKSVPASSATPTPTPAPRADGLPVLQPQAAPETAGSGLPPAETHAPLSTAYDAPAGAAGADA LPVARLAPGPDETRLRQARPPAADGALGEAGEVPAAPAEPHAPAPAAGAAAPDVPDVPDVPAPFVAPEPAVPHELAGAPQ PEPAADPELNASGARFASPDTAARPQSAEAAPASDVPDAPFAPEPATPQASTAAPEPVAAPEEARAPLTPPAHSGLSDAE AAFVAPEPAVAPEFAAMPEPLAAPQPGVASVTSPPAAAPHEAGAAPLVGDDEHDAPDDGSLAYALADPEQAAEQRDAGPV AAGGRDASGIAAAVDAPADSDVVARTESALHAIEAMPPAAFAELTPFGADEPMPARFADQEAPPPAELQHGAPEPLPVAA APAPVAPAVDARRLAERLHGRVAGYLAGEGRALIDARCRELVQQHAAALAEEVSQQVLLALAPEIEQWVSEAVGEALADH PPPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48187; Mature: 48056
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTNREFDIPVLTDVLVPGKSVPASSATPTPTPAPRADGLPVLQPQAAPETAGSGLPPA CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH ETHAPLSTAYDAPAGAAGADALPVARLAPGPDETRLRQARPPAADGALGEAGEVPAAPAE HCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC PHAPAPAAGAAAPDVPDVPDVPAPFVAPEPAVPHELAGAPQPEPAADPELNASGARFASP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC DTAARPQSAEAAPASDVPDAPFAPEPATPQASTAAPEPVAAPEEARAPLTPPAHSGLSDA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC EAAFVAPEPAVAPEFAAMPEPLAAPQPGVASVTSPPAAAPHEAGAAPLVGDDEHDAPDDG CEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SLAYALADPEQAAEQRDAGPVAAGGRDASGIAAAVDAPADSDVVARTESALHAIEAMPPA CEEEEECCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCH AFAELTPFGADEPMPARFADQEAPPPAELQHGAPEPLPVAAAPAPVAPAVDARRLAERLH HHHHCCCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH GRVAGYLAGEGRALIDARCRELVQQHAAALAEEVSQQVLLALAPEIEQWVSEAVGEALAD HHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPPPPA CCCCCC >Mature Secondary Structure PDTNREFDIPVLTDVLVPGKSVPASSATPTPTPAPRADGLPVLQPQAAPETAGSGLPPA CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH ETHAPLSTAYDAPAGAAGADALPVARLAPGPDETRLRQARPPAADGALGEAGEVPAAPAE HCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC PHAPAPAAGAAAPDVPDVPDVPAPFVAPEPAVPHELAGAPQPEPAADPELNASGARFASP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC DTAARPQSAEAAPASDVPDAPFAPEPATPQASTAAPEPVAAPEEARAPLTPPAHSGLSDA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC EAAFVAPEPAVAPEFAAMPEPLAAPQPGVASVTSPPAAAPHEAGAAPLVGDDEHDAPDDG CEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SLAYALADPEQAAEQRDAGPVAAGGRDASGIAAAVDAPADSDVVARTESALHAIEAMPPA CEEEEECCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCH AFAELTPFGADEPMPARFADQEAPPPAELQHGAPEPLPVAAAPAPVAPAVDARRLAERLH HHHHCCCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH GRVAGYLAGEGRALIDARCRELVQQHAAALAEEVSQQVLLALAPEIEQWVSEAVGEALAD HHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPPPPA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA