Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028114

Identifier: 238028114

GI number: 238028114

Start: 2928724

End: 2929875

Strand: Reverse

Name: 238028114

Synonym: bglu_1g25650

Alternate gene names: NA

Gene position: 2929875-2928724 (Counterclockwise)

Preceding gene: 238028115

Following gene: 238028109

Centisome position: 75.0

GC content: 65.1

Gene sequence:

>1152_bases
ATGAGCCTTTCGATCACGAGCCAATTCGATGCCGGCGCGATCGACGTCGTGGCGTGCGAGCGCCCCGATGCGATCCGGCT
GCGCATTCGCGGCGACAATCAGTCCGAATTCGCGCAGTGGTTCTACTTTCGCCTGTCCGGTGCGCGCGGCGAGCGTTGCG
TGATCGCATTCGAGAACGCGCACGCCTGCGCCTATCCGGCCGGCTGGCGAGACTATCGTGCGGTGGCGAGCTACGACCGC
GTGAACTGGTTTCGCGTGCCGACCGAGTTCGACGGCACCGTGATGACGGTCGATCACACGCCGGAATTCGACACCATCTA
CTACGCCTACTTCGAACCGTACAGCGAAGAGCGCCGCTCGGAGTTTCTCGGCGCTATCCAGCAGATGCCTCAGGCGAGCG
TAGTCGAGCTCGGCCGCAGCGTCCAGGGGAGGCCCATGTCGCTGCTCGTGCTCGGTACGCCCGACGAGGCCGACACGAAG
AAGAAGGTTTGGGTGATCGCGCGCCAGCATCCCGGCGAATCGATGGCCGAATGGTTCGTCGAGGGGCTGGTGAAGCGGCT
CGCCGGCTGGGGCGACTGGGCCGGCGACGCGGTGGCGCGCAAGCTCTACGACCACGCGACGTTTTATATCGTGCCGAACA
TGAACCCGGACGGCAGCGTGCTCGGCAACCTGCGGACCAACGCGGTCGGCGCGAACCTGAACCGCGAATGGATGGAGCCC
GACGCCGCGCGCAGTCCCGAGGTGTACGTCGTGCGCGACGCACTGCATGCGATCGGCTGCGACATGTTCTTCGACATCCA
TGGCGACGAGGATCTGCCGTATGTGTTCGTGGCAGGTTCCGAGATGCTGCCCGGCTTCACCGACCGTCAGCGCGAAGAGC
AGCAGGCGTTCGTCGCCGCCTTCAAGCAGGCGAGCCCTGATTTCCAGGACCGCTACGGCTATCCGGCCTCCAAGTATCGA
GAGGATGCGCTGAAGCTTGCCTCGAAATACGTCGGCCATGCGTTCGGCTGCCTGTCGCTGACGCTCGAGATGCCGTTCAA
GGACAACGCCGACCTGCCGGACGAGCGCGTGGGCTGGAACGGTGAGCGCAGCGCGGCGCTCGGTGCGGCGATGCTGCTGC
CGATCCTGAACCAGATCGAGCGATTCGCGTGA

Upstream 100 bases:

>100_bases
GCGAGCCCGGCCTGCCCACGATTCGTTGGCGGGCCGGCTTGGGCGCCTCGGCCTGGCCTTTACCCGGTGCCTCGCGAGGG
CGCCGCTTTCTGGAGATGAG

Downstream 100 bases:

>100_bases
CGTGACGCGAGGTGTGGCGGCGGCGAGCCGCCATCGACTGGCGCTTATGACAAAAAGGCCGGAATGCGCAAGCATCCCGG
CCTTTTTGTTTCGTCTGCGT

Product: zinc carboxypeptidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSLSITSQFDAGAIDVVACERPDAIRLRIRGDNQSEFAQWFYFRLSGARGERCVIAFENAHACAYPAGWRDYRAVASYDR
VNWFRVPTEFDGTVMTVDHTPEFDTIYYAYFEPYSEERRSEFLGAIQQMPQASVVELGRSVQGRPMSLLVLGTPDEADTK
KKVWVIARQHPGESMAEWFVEGLVKRLAGWGDWAGDAVARKLYDHATFYIVPNMNPDGSVLGNLRTNAVGANLNREWMEP
DAARSPEVYVVRDALHAIGCDMFFDIHGDEDLPYVFVAGSEMLPGFTDRQREEQQAFVAAFKQASPDFQDRYGYPASKYR
EDALKLASKYVGHAFGCLSLTLEMPFKDNADLPDERVGWNGERSAALGAAMLLPILNQIERFA

Sequences:

>Translated_383_residues
MSLSITSQFDAGAIDVVACERPDAIRLRIRGDNQSEFAQWFYFRLSGARGERCVIAFENAHACAYPAGWRDYRAVASYDR
VNWFRVPTEFDGTVMTVDHTPEFDTIYYAYFEPYSEERRSEFLGAIQQMPQASVVELGRSVQGRPMSLLVLGTPDEADTK
KKVWVIARQHPGESMAEWFVEGLVKRLAGWGDWAGDAVARKLYDHATFYIVPNMNPDGSVLGNLRTNAVGANLNREWMEP
DAARSPEVYVVRDALHAIGCDMFFDIHGDEDLPYVFVAGSEMLPGFTDRQREEQQAFVAAFKQASPDFQDRYGYPASKYR
EDALKLASKYVGHAFGCLSLTLEMPFKDNADLPDERVGWNGERSAALGAAMLLPILNQIERFA
>Mature_382_residues
SLSITSQFDAGAIDVVACERPDAIRLRIRGDNQSEFAQWFYFRLSGARGERCVIAFENAHACAYPAGWRDYRAVASYDRV
NWFRVPTEFDGTVMTVDHTPEFDTIYYAYFEPYSEERRSEFLGAIQQMPQASVVELGRSVQGRPMSLLVLGTPDEADTKK
KVWVIARQHPGESMAEWFVEGLVKRLAGWGDWAGDAVARKLYDHATFYIVPNMNPDGSVLGNLRTNAVGANLNREWMEPD
AARSPEVYVVRDALHAIGCDMFFDIHGDEDLPYVFVAGSEMLPGFTDRQREEQQAFVAAFKQASPDFQDRYGYPASKYRE
DALKLASKYVGHAFGCLSLTLEMPFKDNADLPDERVGWNGERSAALGAAMLLPILNQIERFA

Specific function: Unknown

COG id: COG2866

COG function: function code E; Predicted carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI190194403, Length=353, Percent_Identity=27.7620396600567, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI222352158, Length=353, Percent_Identity=24.929178470255, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI120444924, Length=327, Percent_Identity=25.0764525993884, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI31657119, Length=311, Percent_Identity=24.4372990353698, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI170763513, Length=330, Percent_Identity=23.6363636363636, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI115533904, Length=372, Percent_Identity=25.5376344086022, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI193202888, Length=191, Percent_Identity=29.3193717277487, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24641847, Length=365, Percent_Identity=24.1095890410959, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI28571179, Length=365, Percent_Identity=24.1095890410959, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI161077807, Length=365, Percent_Identity=24.1095890410959, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24641845, Length=365, Percent_Identity=24.1095890410959, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24651466, Length=173, Percent_Identity=28.9017341040462, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834 [H]

Pfam domain/function: PF00246 Peptidase_M14 [H]

EC number: NA

Molecular weight: Translated: 43140; Mature: 43009

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSITSQFDAGAIDVVACERPDAIRLRIRGDNQSEFAQWFYFRLSGARGERCVIAFENA
CCCEECCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHEEEEEECCCCCCEEEEEEECC
HACAYPAGWRDYRAVASYDRVNWFRVPTEFDGTVMTVDHTPEFDTIYYAYFEPYSEERRS
CEEECCCCCHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCEEEEEEECCHHHHHHH
EFLGAIQQMPQASVVELGRSVQGRPMSLLVLGTPDEADTKKKVWVIARQHPGESMAEWFV
HHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHH
EGLVKRLAGWGDWAGDAVARKLYDHATFYIVPNMNPDGSVLGNLRTNAVGANLNREWMEP
HHHHHHHCCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCC
DAARSPEVYVVRDALHAIGCDMFFDIHGDEDLPYVFVAGSEMLPGFTDRQREEQQAFVAA
CCCCCCCEEEEHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
FKQASPDFQDRYGYPASKYREDALKLASKYVGHAFGCLSLTLEMPFKDNADLPDERVGWN
HHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHCCCC
GERSAALGAAMLLPILNQIERFA
CCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLSITSQFDAGAIDVVACERPDAIRLRIRGDNQSEFAQWFYFRLSGARGERCVIAFENA
CCEECCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHEEEEEECCCCCCEEEEEEECC
HACAYPAGWRDYRAVASYDRVNWFRVPTEFDGTVMTVDHTPEFDTIYYAYFEPYSEERRS
CEEECCCCCHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCEEEEEEECCHHHHHHH
EFLGAIQQMPQASVVELGRSVQGRPMSLLVLGTPDEADTKKKVWVIARQHPGESMAEWFV
HHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHH
EGLVKRLAGWGDWAGDAVARKLYDHATFYIVPNMNPDGSVLGNLRTNAVGANLNREWMEP
HHHHHHHCCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCC
DAARSPEVYVVRDALHAIGCDMFFDIHGDEDLPYVFVAGSEMLPGFTDRQREEQQAFVAA
CCCCCCCEEEEHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
FKQASPDFQDRYGYPASKYREDALKLASKYVGHAFGCLSLTLEMPFKDNADLPDERVGWN
HHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHCCCC
GERSAALGAAMLLPILNQIERFA
CCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8320209 [H]