| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028058
Identifier: 238028058
GI number: 238028058
Start: 2853948
End: 2854445
Strand: Reverse
Name: 238028058
Synonym: bglu_1g25090
Alternate gene names: NA
Gene position: 2854445-2853948 (Counterclockwise)
Preceding gene: 238028059
Following gene: 238028055
Centisome position: 73.07
GC content: 68.88
Gene sequence:
>498_bases ATGACGATGAGGTGGAACTGGCGCACGGGCGCCGCGTTGACGTTACTGGCGGCGACGATCGCGTTTGCGGGATGCGCAGC CCCGCCGCAGAAGCCGATCTACCGCGATATGTGGGCCTCGGTGCCGGCGCCGGCCGCGGGGCAGGGACGCATCGTGTTCT TTCGCAGTGCGGCGAAGCTCGGCATGGCGAGCGGCGACCGCGTCGATGTCAACGACAAGCCTGCCGGCCAGCTGCCGGGC GGCGGCTTCTTCTATCTCGACGAGCCGGCCGGGCAGTACACCGTCACGACCTCGAGCGCGCCGGACAGGCCGCTCACGTT CTATCTGATGCAGGGCGAGACCAAGTACGTGCGCATGGGGGTGCCGTTCGCGCTGGTGGCGGGGCCGCTCACGCCGTCGC TCGAAAGCGATTCGGGCAAGGTGCGCCAGGAACTGTCGATGCTGCGCTACGTCGGTCGCGGCGACGGCGCAGGACACATG GCCGCGAAGACGCCATGA
Upstream 100 bases:
>100_bases GATGGTCGCGGCGGCAGGTCGAATCGTCTATGCTGGACGGACTGACGGCAAGCCGGCCGCGCGCCGGTTTCGTCGCGACA CGGTCCACGATCCGGAGGGC
Downstream 100 bases:
>100_bases GGGCGGCCAATCCGGCGGGGCGGCGCCCGGGTCTGCGGCGTCGGACCGGCCTCGAGTGACGGGCGCCGTGCGCATGGCCG CCCGCGCGCGCACCAGCCGG
Product: Pputative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTMRWNWRTGAALTLLAATIAFAGCAAPPQKPIYRDMWASVPAPAAGQGRIVFFRSAAKLGMASGDRVDVNDKPAGQLPG GGFFYLDEPAGQYTVTTSSAPDRPLTFYLMQGETKYVRMGVPFALVAGPLTPSLESDSGKVRQELSMLRYVGRGDGAGHM AAKTP
Sequences:
>Translated_165_residues MTMRWNWRTGAALTLLAATIAFAGCAAPPQKPIYRDMWASVPAPAAGQGRIVFFRSAAKLGMASGDRVDVNDKPAGQLPG GGFFYLDEPAGQYTVTTSSAPDRPLTFYLMQGETKYVRMGVPFALVAGPLTPSLESDSGKVRQELSMLRYVGRGDGAGHM AAKTP >Mature_164_residues TMRWNWRTGAALTLLAATIAFAGCAAPPQKPIYRDMWASVPAPAAGQGRIVFFRSAAKLGMASGDRVDVNDKPAGQLPGG GFFYLDEPAGQYTVTTSSAPDRPLTFYLMQGETKYVRMGVPFALVAGPLTPSLESDSGKVRQELSMLRYVGRGDGAGHMA AKTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17573; Mature: 17442
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMRWNWRTGAALTLLAATIAFAGCAAPPQKPIYRDMWASVPAPAAGQGRIVFFRSAAKL CCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCC GMASGDRVDVNDKPAGQLPGGGFFYLDEPAGQYTVTTSSAPDRPLTFYLMQGETKYVRMG CCCCCCEEECCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCEEEEEC VPFALVAGPLTPSLESDSGKVRQELSMLRYVGRGDGAGHMAAKTP CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TMRWNWRTGAALTLLAATIAFAGCAAPPQKPIYRDMWASVPAPAAGQGRIVFFRSAAKL CEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCC GMASGDRVDVNDKPAGQLPGGGFFYLDEPAGQYTVTTSSAPDRPLTFYLMQGETKYVRMG CCCCCCEEECCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCEEEEEC VPFALVAGPLTPSLESDSGKVRQELSMLRYVGRGDGAGHMAAKTP CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA