| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028054
Identifier: 238028054
GI number: 238028054
Start: 2846371
End: 2847369
Strand: Reverse
Name: 238028054
Synonym: bglu_1g25050
Alternate gene names: NA
Gene position: 2847369-2846371 (Counterclockwise)
Preceding gene: 238028055
Following gene: 238028053
Centisome position: 72.89
GC content: 66.77
Gene sequence:
>999_bases ATGCGCAATTTCCTGTCTTTCGGTCGTGCCGCCTTGCTGGTCGGCGCCCTGGCCGCCACGGCCGCTCCGGCCGCCTTCGC CAACAACGTGATCGTGCTGAATTCGGCCGAGGCGACGCTCTCGCTGATCGACGAGAAGACGCATCAGGTGGTCGGCAACA TGCCGACCGGCAAGGAGCCGCATCACCTGATGGCCACGCCGGACAATTCCTCGCTGATCGTCGCGAATTCGGTCTCGAAC AGCCTGATGTTCCTCGATCCGCGCACGGGCGCGCTGCAGCGCACCGTCGAGGGCATCGACGACCCGTACCAGCTCGGCTT CTCGCCGGACCACAAGTGGTTCGTGGCGGCCGGCCTGCGGCTCGACCGCGTCGACATCTACAGCTATGACGGCCATAACG TCAAGCTGGTCAAGCGCGTGCCGCTCGCGGTGATGCCGAGCCACCTCGCGTTCACCAAAGACAGCCGCACCGTGCTGGTG TCGCTGCAGGTGTCGGGCGAGCTGGCCGCGATCGACCTGCCGACCCAGACCGTGAAATGGAAGATGAAGGTCGGCAAGGT GCCGGCCGGCCTCTGGATGACCCCCAGCGACAAGTACGTGCTGGTCGGCATGACGGGCGCCGACTACGTGGCGGTGGTGG ACTGGCGCAACCAGCGGGTCGTCAAGACGATCCCGACCGGCAAGGGCGCGCACAACTTCCGCTCGCTCGCCGACGGCGTG CACGTGGCCGTCACCAACCGCGTCGCCAACACCATCAGCATCATCGACGAGAACACCCTCACCAACGTCGGCGACATCAC GGGCCTGCTGCCCGGCCCCGACGACATGGAGCTGTCGGCCGATCGCAAGACGCTGTGGGTGACGTTCCGCTTCGCCAAGA AGGTCGGCGTGATCGACCTGGCGAGCCGGCGCCTGATCCAGACGATCCCGGTCGGCCGCTCGCCGCATGGCATCTATTTC TACGACCGCGCGCCGGTGACGGCGCCCAACGGCGCCTGA
Upstream 100 bases:
>100_bases GCGCGGCCGCCACCGTCGCGGCGGCCGGGGCGGCCGCCCGGTCAACCGCGCGGCCGCCCGAACGTTCTACAATGACGGTT GTCACTCCACGTGGGTCTTC
Downstream 100 bases:
>100_bases CGGCCGGAGTTCGCCCATGCTTCACGCGATCGCCTCGATGCTCGACACCTTCGTGTCGAACCTGCAGACCTGGCTCTATG TCGACGTGGTCCAGCCGGCG
Product: YVTN beta-propeller repeat-containing protein
Products: NA
Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Cell Surface Protein; Surface Layer Protein; YVTN Family Beta-Propeller Repeat Protein; Beta-Propeller Repeat-Containing Protein; Beta-Propeller Fold Protein; Surface Antigen; Cytochrome D1 Heme Region; Triple Helix Repeat-Containing Collagen; Signal Peptide Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; WD40 Domain-Containing Protein; Outer Membrane Protein; YVTN Beta-Propeller Repeat Family Protein; PGRS-Subfamily Gly-Rich Protein; IPT/TIG Domain Protein; Yvtn Beta-Propeller Repeat-Containing Protein; Vegetative Incompatibility; Signal Peptide; Surface Antigen-Like Protein; Cytochrome D1 Heme Subunit; Serine/Threonine Protein Kinase; YVTN Family Beta-Propeller Repeat-Containing Protein; Yvtn Beta-Propeller Repeat Family Protein; Secreted Protein; Lipoprotein; Exported Protein; YVTN Family Beta-Propeller Repeat Family Protein
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MRNFLSFGRAALLVGALAATAAPAAFANNVIVLNSAEATLSLIDEKTHQVVGNMPTGKEPHHLMATPDNSSLIVANSVSN SLMFLDPRTGALQRTVEGIDDPYQLGFSPDHKWFVAAGLRLDRVDIYSYDGHNVKLVKRVPLAVMPSHLAFTKDSRTVLV SLQVSGELAAIDLPTQTVKWKMKVGKVPAGLWMTPSDKYVLVGMTGADYVAVVDWRNQRVVKTIPTGKGAHNFRSLADGV HVAVTNRVANTISIIDENTLTNVGDITGLLPGPDDMELSADRKTLWVTFRFAKKVGVIDLASRRLIQTIPVGRSPHGIYF YDRAPVTAPNGA
Sequences:
>Translated_332_residues MRNFLSFGRAALLVGALAATAAPAAFANNVIVLNSAEATLSLIDEKTHQVVGNMPTGKEPHHLMATPDNSSLIVANSVSN SLMFLDPRTGALQRTVEGIDDPYQLGFSPDHKWFVAAGLRLDRVDIYSYDGHNVKLVKRVPLAVMPSHLAFTKDSRTVLV SLQVSGELAAIDLPTQTVKWKMKVGKVPAGLWMTPSDKYVLVGMTGADYVAVVDWRNQRVVKTIPTGKGAHNFRSLADGV HVAVTNRVANTISIIDENTLTNVGDITGLLPGPDDMELSADRKTLWVTFRFAKKVGVIDLASRRLIQTIPVGRSPHGIYF YDRAPVTAPNGA >Mature_332_residues MRNFLSFGRAALLVGALAATAAPAAFANNVIVLNSAEATLSLIDEKTHQVVGNMPTGKEPHHLMATPDNSSLIVANSVSN SLMFLDPRTGALQRTVEGIDDPYQLGFSPDHKWFVAAGLRLDRVDIYSYDGHNVKLVKRVPLAVMPSHLAFTKDSRTVLV SLQVSGELAAIDLPTQTVKWKMKVGKVPAGLWMTPSDKYVLVGMTGADYVAVVDWRNQRVVKTIPTGKGAHNFRSLADGV HVAVTNRVANTISIIDENTLTNVGDITGLLPGPDDMELSADRKTLWVTFRFAKKVGVIDLASRRLIQTIPVGRSPHGIYF YDRAPVTAPNGA
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35932; Mature: 35932
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNFLSFGRAALLVGALAATAAPAAFANNVIVLNSAEATLSLIDEKTHQVVGNMPTGKEP CCCHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCC HHLMATPDNSSLIVANSVSNSLMFLDPRTGALQRTVEGIDDPYQLGFSPDHKWFVAAGLR CEEEECCCCCCEEEEECCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCE LDRVDIYSYDGHNVKLVKRVPLAVMPSHLAFTKDSRTVLVSLQVSGELAAIDLPTQTVKW EEEEEEEEECCCCEEEEEECCEEECCCCEEEECCCCEEEEEEEECCCEEEEECCCCEEEE KMKVGKVPAGLWMTPSDKYVLVGMTGADYVAVVDWRNQRVVKTIPTGKGAHNFRSLADGV EEEECCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHCCE HVAVTNRVANTISIIDENTLTNVGDITGLLPGPDDMELSADRKTLWVTFRFAKKVGVIDL EEEEECCCCCEEEEEECCCCCCCCHHEECCCCCCCCEECCCCEEEEEEEEECCCCCEEEH ASRRLIQTIPVGRSPHGIYFYDRAPVTAPNGA HCCHHHHHCCCCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MRNFLSFGRAALLVGALAATAAPAAFANNVIVLNSAEATLSLIDEKTHQVVGNMPTGKEP CCCHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCC HHLMATPDNSSLIVANSVSNSLMFLDPRTGALQRTVEGIDDPYQLGFSPDHKWFVAAGLR CEEEECCCCCCEEEEECCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCE LDRVDIYSYDGHNVKLVKRVPLAVMPSHLAFTKDSRTVLVSLQVSGELAAIDLPTQTVKW EEEEEEEEECCCCEEEEEECCEEECCCCEEEECCCCEEEEEEEECCCEEEEECCCCEEEE KMKVGKVPAGLWMTPSDKYVLVGMTGADYVAVVDWRNQRVVKTIPTGKGAHNFRSLADGV EEEECCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHCCE HVAVTNRVANTISIIDENTLTNVGDITGLLPGPDDMELSADRKTLWVTFRFAKKVGVIDL EEEEECCCCCEEEEEECCCCCCCCHHEECCCCCCCCEECCCCEEEEEEEEECCCCCEEEH ASRRLIQTIPVGRSPHGIYFYDRAPVTAPNGA HCCHHHHHCCCCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA