| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is lutA1 [H]
Identifier: 238028025
GI number: 238028025
Start: 2808461
End: 2809183
Strand: Reverse
Name: lutA1 [H]
Synonym: bglu_1g24750
Alternate gene names: 238028025
Gene position: 2809183-2808461 (Counterclockwise)
Preceding gene: 238028027
Following gene: 238028024
Centisome position: 71.91
GC content: 68.33
Gene sequence:
>723_bases ATGCGAGTCGGATTGTTCGTCACCTGCCTCATCGATCTGATGCGGCCCGAAATCGGCTTTTCCGCGCTGAAGCTGATCCG CGAGGCCGGTTTCGACGTGAGCGTGCCGGCCTCGCAGACCTGCTGCGGGCAGCCCGCCTACAATTCGGGCGATCGGCGCC TCGCGCGTGATCTGGCCGAGAAGACGCTGCGCGAATTCGAGCCGTTCGACTACGTCGTGGTGCCGTCGGGCTCCTGCGGC GGCATGATCCGCGCGCATTACGGTGACCTGTTCCGCGACGATCCCGAGCTGATGGCGCGGTTCGGGCGCCTGCGCGAGCG CGTCCACGAACTGACCGACTTCCTCGTCAGGGTCGCGAAGGTGCAATTGCCGCCGGGCGAATTTCGCGGGCCGGTGGCCT ATCACGACGCCTGCTCGGGCCTGCGCGAGCTCGGCGTGAAGGCTCAGCCGCGCGCCCTGCTGGCCCAGCGCGGCGTGGAG CTCGCCGAGATGAAGGATTGCGAGCATTGCTGCGGCTTCGGCGGCACGTTCGCCGTCAAGTACGGCGCCATTTCCACCGC GATCGTCGACGAGAAGTGCGCGAACGTGCAGGCGAGCGGCGCGCGCGCCGTGGTGCTCGGCGATCTCGGCTGCATCCTCA ACATCGAGGGCCGGCTGCGCCGCCTGGGCGACAGCGAGACGCGCGTGCTGCATATCGCGCAGGTGCTGGCCGGCGATCTC TGA
Upstream 100 bases:
>100_bases ATCGAATCGGGAAAGGCCGTCCCGCCGTTCGCCAGGCCGCGGCGTTGGTCCCGCGCGGCAAACGGCGGATAATGAGCGGC GTTTTCTCGAAGGAGCCCCC
Downstream 100 bases:
>100_bases GCCGTCGAAGCCGCGTTCCCTTTTCCGATTGTCGCCAGCCGAGTCAGCCAGCCATGCAAGTCCAATCGATGCAGTTCCAG GCCCGCGCGGGGCAGAAGCT
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MRVGLFVTCLIDLMRPEIGFSALKLIREAGFDVSVPASQTCCGQPAYNSGDRRLARDLAEKTLREFEPFDYVVVPSGSCG GMIRAHYGDLFRDDPELMARFGRLRERVHELTDFLVRVAKVQLPPGEFRGPVAYHDACSGLRELGVKAQPRALLAQRGVE LAEMKDCEHCCGFGGTFAVKYGAISTAIVDEKCANVQASGARAVVLGDLGCILNIEGRLRRLGDSETRVLHIAQVLAGDL
Sequences:
>Translated_240_residues MRVGLFVTCLIDLMRPEIGFSALKLIREAGFDVSVPASQTCCGQPAYNSGDRRLARDLAEKTLREFEPFDYVVVPSGSCG GMIRAHYGDLFRDDPELMARFGRLRERVHELTDFLVRVAKVQLPPGEFRGPVAYHDACSGLRELGVKAQPRALLAQRGVE LAEMKDCEHCCGFGGTFAVKYGAISTAIVDEKCANVQASGARAVVLGDLGCILNIEGRLRRLGDSETRVLHIAQVLAGDL >Mature_240_residues MRVGLFVTCLIDLMRPEIGFSALKLIREAGFDVSVPASQTCCGQPAYNSGDRRLARDLAEKTLREFEPFDYVVVPSGSCG GMIRAHYGDLFRDDPELMARFGRLRERVHELTDFLVRVAKVQLPPGEFRGPVAYHDACSGLRELGVKAQPRALLAQRGVE LAEMKDCEHCCGFGGTFAVKYGAISTAIVDEKCANVQASGARAVVLGDLGCILNIEGRLRRLGDSETRVLHIAQVLAGDL
Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutA/ykgE family [H]
Homologues:
Organism=Escherichia coli, GI1786497, Length=238, Percent_Identity=36.9747899159664, Blast_Score=152, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004017 - InterPro: IPR022822 [H]
Pfam domain/function: PF02754 CCG [H]
EC number: NA
Molecular weight: Translated: 26185; Mature: 26185
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGLFVTCLIDLMRPEIGFSALKLIREAGFDVSVPASQTCCGQPAYNSGDRRLARDLAE CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH KTLREFEPFDYVVVPSGSCGGMIRAHYGDLFRDDPELMARFGRLRERVHELTDFLVRVAK HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VQLPPGEFRGPVAYHDACSGLRELGVKAQPRALLAQRGVELAEMKDCEHCCGFGGTFAVK HCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEE YGAISTAIVDEKCANVQASGARAVVLGDLGCILNIEGRLRRLGDSETRVLHIAQVLAGDL CCCHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MRVGLFVTCLIDLMRPEIGFSALKLIREAGFDVSVPASQTCCGQPAYNSGDRRLARDLAE CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH KTLREFEPFDYVVVPSGSCGGMIRAHYGDLFRDDPELMARFGRLRERVHELTDFLVRVAK HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VQLPPGEFRGPVAYHDACSGLRELGVKAQPRALLAQRGVELAEMKDCEHCCGFGGTFAVK HCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEE YGAISTAIVDEKCANVQASGARAVVLGDLGCILNIEGRLRRLGDSETRVLHIAQVLAGDL CCCHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA