Click here to switch to the map view.

The map label for this gene is hscB [H]

Identifier: 238028017

GI number: 238028017

Start: 2802515

End: 2803042

Strand: Reverse

Name: hscB [H]

Synonym: bglu_1g24670

Alternate gene names: 238028017

Gene position: 2803042-2802515 (Counterclockwise)

Preceding gene: 238028018

Following gene: 238028016

Centisome position: 71.75

GC content: 67.61

Gene sequence:

>528_bases
ATGAATTCGCTGAAAGACAGCTATTTCGAACTCTTTCATCTGCCGGCGCAGTTCGCGCTCGATGCCGGCGCGCTCGACAC
GGCCTATCGCGCCGTGCAGTCGCAAGTGCATCCGGACCGCTTCGCCGCGGCCGGCGACGCGCAGAAGCGCATCGCGATGC
AGTGGGCGACGCGCGCCAACGAGGCATACCAGACGCTGCGCGATCCGCTCAGGCGCGCGATCTACCTGCTGTCGCTGCGC
GGGGCGGACGTCGGCGCGGAAAGCAACACGGCGATGGAGCCGGCATTCCTGATGCAGCAGATGGAGTGGCGCGAGGCGAT
CGAGGATGCGGCAGGCGCGCAGAACGTGCCGGCGCTCGACGCGCTGCTCGCCGAACTGCGCGACGAGAAGCGCACGCGCT
TCGACAAGCTCGCGGCGTTGCTCGACAGCGGCTCCGACCAGGGCGCGGCCGAGGCCGTGCGGCAGTTGATGTTCATCGAG
CGGGTGGCCGCCGAAGTGGCCGCGCAGATCGAACGTCTCGAAGATTAA

Upstream 100 bases:

>100_bases
ACCGCGCGATGCGGACCACAGGCGGCACTGGCCGCCTTTTTCTTGTGCGGCACGCGCCGCGCCCCTGCACTGCCTGATAC
CCCTGGTGGGATGCCACGCG

Downstream 100 bases:

>100_bases
CCGTGCTTCGCCGTGTCTCGCACACGGCGCGCGATGCACGCGGGGCCGCAGGCCCCTCACCGAAGATACCGATGGCTTTA
CTGCAAATCTCCGAACCCGG

Product: co-chaperone HscB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MNSLKDSYFELFHLPAQFALDAGALDTAYRAVQSQVHPDRFAAAGDAQKRIAMQWATRANEAYQTLRDPLRRAIYLLSLR
GADVGAESNTAMEPAFLMQQMEWREAIEDAAGAQNVPALDALLAELRDEKRTRFDKLAALLDSGSDQGAAEAVRQLMFIE
RVAAEVAAQIERLED

Sequences:

>Translated_175_residues
MNSLKDSYFELFHLPAQFALDAGALDTAYRAVQSQVHPDRFAAAGDAQKRIAMQWATRANEAYQTLRDPLRRAIYLLSLR
GADVGAESNTAMEPAFLMQQMEWREAIEDAAGAQNVPALDALLAELRDEKRTRFDKLAALLDSGSDQGAAEAVRQLMFIE
RVAAEVAAQIERLED
>Mature_175_residues
MNSLKDSYFELFHLPAQFALDAGALDTAYRAVQSQVHPDRFAAAGDAQKRIAMQWATRANEAYQTLRDPLRRAIYLLSLR
GADVGAESNTAMEPAFLMQQMEWREAIEDAAGAQNVPALDALLAELRDEKRTRFDKLAALLDSGSDQGAAEAVRQLMFIE
RVAAEVAAQIERLED

Specific function: Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward hscA [H]

COG id: COG1076

COG function: function code O; DnaJ-domain-containing proteins 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI50301234, Length=159, Percent_Identity=25.1572327044025, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI1788876, Length=168, Percent_Identity=37.5, Blast_Score=117, Evalue=6e-28,
Organism=Drosophila melanogaster, GI161084223, Length=168, Percent_Identity=31.547619047619, Blast_Score=97, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR009073
- InterPro:   IPR004640
- InterPro:   IPR015609 [H]

Pfam domain/function: PF00226 DnaJ; PF07743 HSCB_C [H]

EC number: NA

Molecular weight: Translated: 19414; Mature: 19414

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLKDSYFELFHLPAQFALDAGALDTAYRAVQSQVHPDRFAAAGDAQKRIAMQWATRAN
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHH
EAYQTLRDPLRRAIYLLSLRGADVGAESNTAMEPAFLMQQMEWREAIEDAAGAQNVPALD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
ALLAELRDEKRTRFDKLAALLDSGSDQGAAEAVRQLMFIERVAAEVAAQIERLED
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSLKDSYFELFHLPAQFALDAGALDTAYRAVQSQVHPDRFAAAGDAQKRIAMQWATRAN
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHH
EAYQTLRDPLRRAIYLLSLRGADVGAESNTAMEPAFLMQQMEWREAIEDAAGAQNVPALD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
ALLAELRDEKRTRFDKLAALLDSGSDQGAAEAVRQLMFIERVAAEVAAQIERLED
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA