| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is iscX [H]
Identifier: 238028014
GI number: 238028014
Start: 2799934
End: 2800140
Strand: Reverse
Name: iscX [H]
Synonym: bglu_1g24640
Alternate gene names: 238028014
Gene position: 2800140-2799934 (Counterclockwise)
Preceding gene: 238028015
Following gene: 238028009
Centisome position: 71.68
GC content: 62.32
Gene sequence:
>207_bases ATGAAATGGACCGATTCACGCGAGATCGCGATGGCGCTCGCCGACAAGTATCCCGAGGTGGACCCGAGGACGATCCGCTT CACGGACCTGCATCAGTGGGTGCTCGGACTCGACGGCTTCGACGATGCGCCGGACCGCTCGGGCGAGAAGATCCTGGAGG CGATCCAGTTGCTCTGGATCGACGAAGCGGACTACGACGACGCCTAA
Upstream 100 bases:
>100_bases ATCGTGAAGGACGATTCGGATCTCGTCGTCGAGATCCCGAGGTACACGATCAATCACGCCAAAGAGAATCATTGATCCCA ACCCGTCACGAGGTGCGACG
Downstream 100 bases:
>100_bases AGCCTGGCGGCGGCGCCCGCGAACTGCCGGGCGCTCGCTGCGCCGGCCGCGCTTGCGCTGCCGCCGATGCGGTGGCCTTG CCATGCAAAACGCCTCGCGA
Product: FeS assembly protein IscX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MKWTDSREIAMALADKYPEVDPRTIRFTDLHQWVLGLDGFDDAPDRSGEKILEAIQLLWIDEADYDDA
Sequences:
>Translated_68_residues MKWTDSREIAMALADKYPEVDPRTIRFTDLHQWVLGLDGFDDAPDRSGEKILEAIQLLWIDEADYDDA >Mature_68_residues MKWTDSREIAMALADKYPEVDPRTIRFTDLHQWVLGLDGFDDAPDRSGEKILEAIQLLWIDEADYDDA
Specific function: May function as iron donor in the assembly of iron- sulfur clusters [H]
COG id: COG2975
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iscX family [H]
Homologues:
Organism=Escherichia coli, GI1788873, Length=64, Percent_Identity=64.0625, Blast_Score=91, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007479 [H]
Pfam domain/function: PF04384 DUF528 [H]
EC number: NA
Molecular weight: Translated: 7883; Mature: 7883
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWTDSREIAMALADKYPEVDPRTIRFTDLHQWVLGLDGFDDAPDRSGEKILEAIQLLWI CCCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC DEADYDDA CCCCCCCC >Mature Secondary Structure MKWTDSREIAMALADKYPEVDPRTIRFTDLHQWVLGLDGFDDAPDRSGEKILEAIQLLWI CCCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC DEADYDDA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]