| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is hslO [H]
Identifier: 238027999
GI number: 238027999
Start: 2779863
End: 2780813
Strand: Direct
Name: hslO [H]
Synonym: bglu_1g24480
Alternate gene names: 238027999
Gene position: 2779863-2780813 (Clockwise)
Preceding gene: 238027998
Following gene: 238028000
Centisome position: 71.16
GC content: 66.56
Gene sequence:
>951_bases GTGAGCGACCAGTTACAGAAATTCATGTTCAACACGGCGCCGGTGCGCGGCGAGATCGTCTCGCTGCGCCACACCTGGCA GGAAGTCCTGACACGCCGTGCCTACCCGGCACCCGTGCGCAACGTGCTCGGCGAAATGATGGCCGCCTGCGCGTTGCTGT CCGCGAACCTGAAGTTCAACGGCACGCTCATCATGCAGATCTACGGCGACGGGCCGGTGAAGATGCTGGTGGTGCAGTGT GGCTCAGACCTGTCGATCCGCGCCACCGCCAAGCTCTCGGAAGGCGCCGAGCAGACGCTCGGCGAGGACCTGCCGTTCGC CGAGCTCGTCAACGCAAGCGGCCACGGCCGCTGCGTGATCACGCTCGATCCGGCCGACAAGCAGCCGGGCCAGCAGCCCT ACCAGGGCATCGTGCCGCTCAACGACCACGACGGTCCGCTCGAATCGGTCGCGCGCGTGCTCGAACATTACATGCACCAC TCGGAGCAGCTCGACACGCGGCTGTGGCTCGCGGCCAACGGCGATCGCGCGGTCGGCATGCTGCTGCAGAAGCTGCCCGG CGACGGCGGGATCGTGCCGCGCGCCGACGCGCCCGACGCCGACACCTGGGAGCGCGTCTGCACGCTCGGCAGCACGCTTT CGTCGAAGGAGCTGCTCGAGGTGGAACCGGAGACGGTGTTTCGACGTCTGTTCTGGCAGGAGAACGTGAGCCATTTCGAG CCGGCCGGCACGCGCTTCCAATGCACCTGCTCGCGCGAGAAGGTGGGCGGGATGCTGCGCATGCTGGGCCGCGAGGAAGT CGACAGCGTGATCGAGGAGCGCGGCCACGTGGAAATCCATTGCGAATTCTGCAATCAGCGCTACGAATTCGATCCGGTCG ATGTCGAACAGCTGTTCGTGACGCCGCAACTCGGCGCCGGCGTTGCGCCGGCGAGCGACCAGCGTCACTGA
Upstream 100 bases:
>100_bases ATACGCAAAACTACGCGCAGCGACGCGCGTATTTCAAGGAGCAGTTGGCCCGGATCGGCTGAACGCCGCGCCGCTGCTGC CCGACAATCGAGGAACCGAA
Downstream 100 bases:
>100_bases GCAGCAGGCGGCACACCAAGCGTCACGGCCTTCGCCGAAGGAGAAGTCAGCATGAAACCGAAGATCCGCCTTGCCCGCCA GGGTGCAGCGCATGCGACGG
Product: Hsp33 protein
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSDQLQKFMFNTAPVRGEIVSLRHTWQEVLTRRAYPAPVRNVLGEMMAACALLSANLKFNGTLIMQIYGDGPVKMLVVQC GSDLSIRATAKLSEGAEQTLGEDLPFAELVNASGHGRCVITLDPADKQPGQQPYQGIVPLNDHDGPLESVARVLEHYMHH SEQLDTRLWLAANGDRAVGMLLQKLPGDGGIVPRADAPDADTWERVCTLGSTLSSKELLEVEPETVFRRLFWQENVSHFE PAGTRFQCTCSREKVGGMLRMLGREEVDSVIEERGHVEIHCEFCNQRYEFDPVDVEQLFVTPQLGAGVAPASDQRH
Sequences:
>Translated_316_residues MSDQLQKFMFNTAPVRGEIVSLRHTWQEVLTRRAYPAPVRNVLGEMMAACALLSANLKFNGTLIMQIYGDGPVKMLVVQC GSDLSIRATAKLSEGAEQTLGEDLPFAELVNASGHGRCVITLDPADKQPGQQPYQGIVPLNDHDGPLESVARVLEHYMHH SEQLDTRLWLAANGDRAVGMLLQKLPGDGGIVPRADAPDADTWERVCTLGSTLSSKELLEVEPETVFRRLFWQENVSHFE PAGTRFQCTCSREKVGGMLRMLGREEVDSVIEERGHVEIHCEFCNQRYEFDPVDVEQLFVTPQLGAGVAPASDQRH >Mature_315_residues SDQLQKFMFNTAPVRGEIVSLRHTWQEVLTRRAYPAPVRNVLGEMMAACALLSANLKFNGTLIMQIYGDGPVKMLVVQCG SDLSIRATAKLSEGAEQTLGEDLPFAELVNASGHGRCVITLDPADKQPGQQPYQGIVPLNDHDGPLESVARVLEHYMHHS EQLDTRLWLAANGDRAVGMLLQKLPGDGGIVPRADAPDADTWERVCTLGSTLSSKELLEVEPETVFRRLFWQENVSHFEP AGTRFQCTCSREKVGGMLRMLGREEVDSVIEERGHVEIHCEFCNQRYEFDPVDVEQLFVTPQLGAGVAPASDQRH
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=319, Percent_Identity=34.7962382445141, Blast_Score=193, Evalue=1e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - InterPro: IPR023212 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 35050; Mature: 34919
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQLQKFMFNTAPVRGEIVSLRHTWQEVLTRRAYPAPVRNVLGEMMAACALLSANLKFN CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEC GTLIMQIYGDGPVKMLVVQCGSDLSIRATAKLSEGAEQTLGEDLPFAELVNASGHGRCVI CEEEEEEECCCCEEEEEEECCCCCEEEEEHHHHCCHHHHHCCCCCHHHHHCCCCCCEEEE TLDPADKQPGQQPYQGIVPLNDHDGPLESVARVLEHYMHHSEQLDTRLWLAANGDRAVGM EECCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHH LLQKLPGDGGIVPRADAPDADTWERVCTLGSTLSSKELLEVEPETVFRRLFWQENVSHFE HHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHEECCHHHHHHHHHHHHCCCCCC PAGTRFQCTCSREKVGGMLRMLGREEVDSVIEERGHVEIHCEFCNQRYEFDPVDVEQLFV CCCCEEEEEECHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHEEE TPQLGAGVAPASDQRH CCCCCCCCCCCCCCCC >Mature Secondary Structure SDQLQKFMFNTAPVRGEIVSLRHTWQEVLTRRAYPAPVRNVLGEMMAACALLSANLKFN CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEC GTLIMQIYGDGPVKMLVVQCGSDLSIRATAKLSEGAEQTLGEDLPFAELVNASGHGRCVI CEEEEEEECCCCEEEEEEECCCCCEEEEEHHHHCCHHHHHCCCCCHHHHHCCCCCCEEEE TLDPADKQPGQQPYQGIVPLNDHDGPLESVARVLEHYMHHSEQLDTRLWLAANGDRAVGM EECCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHH LLQKLPGDGGIVPRADAPDADTWERVCTLGSTLSSKELLEVEPETVFRRLFWQENVSHFE HHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHEECCHHHHHHHHHHHHCCCCCC PAGTRFQCTCSREKVGGMLRMLGREEVDSVIEERGHVEIHCEFCNQRYEFDPVDVEQLFV CCCCEEEEEECHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHEEE TPQLGAGVAPASDQRH CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]