| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027967
Identifier: 238027967
GI number: 238027967
Start: 2708609
End: 2709151
Strand: Reverse
Name: 238027967
Synonym: bglu_1g24130
Alternate gene names: NA
Gene position: 2709151-2708609 (Counterclockwise)
Preceding gene: 238027969
Following gene: 238027966
Centisome position: 69.35
GC content: 62.43
Gene sequence:
>543_bases ATGATCATCGACGAGACCAAGACCACATCATTCCAGGGTATCTGCACCGTAATCCTTCGCGAGCTTCGAGTCGAGCGAGG CATGCGCCAGGCCATTCTGGCGGACCAGTGCGGGGAGTCCCCATCAGAGTGGGAGAAGCGAGAAGCTGGGAAGGGCAAGC TCAACTTCGAAACCCTCTTGCGCGCCTGCCGAGCGCTCAACGTGTTGCCGTCCGAGCTGATGCAGTGCGCGGAACGCTAC CGGTGGGCGCTCGACCAGCGGGGCTGGTCCGTGGTGCTGTCGGAGATCGGCGGCGACGACACACTGCTGGACCTGGCACC CAAGTATTGGACATCGCCCGGCTACCGGTTGTGGACGTCCGGCATGTGGGTTGGCCTGCCCATCTTCAAAACAACCTGGT GGATGGACAACGTCACCGTGCCGGGCTGGTATGGTCTCGCGGCGGTTTTCGAGTTCGCGGACAACGAGCGTTACCGGGAG TCGCAGCTCGACGAAGAGCGCAATCGCCCGTTCGTGGGCCCTGTCGACCCTGAAAGCTTCTGA
Upstream 100 bases:
>100_bases GCACGAGTGGCTGTCAACCTCGGCCCAGGTGTCGTGGGCCGGGGGTGTTCACCGGATCCCCGTAGAATCGTGCGCATCCG TTCCACCGCCACCCCGCGCC
Downstream 100 bases:
>100_bases TATGCAGCTCATCCCCGACGCGCCGTGCACATTAGCGCCCCCAAGGCGATCGCCCAGCGCCGGGCGCAACGAAGTGCCGA TTGTTTCCTATGCCGGATGA
Product: putative XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family Protein
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MIIDETKTTSFQGICTVILRELRVERGMRQAILADQCGESPSEWEKREAGKGKLNFETLLRACRALNVLPSELMQCAERY RWALDQRGWSVVLSEIGGDDTLLDLAPKYWTSPGYRLWTSGMWVGLPIFKTTWWMDNVTVPGWYGLAAVFEFADNERYRE SQLDEERNRPFVGPVDPESF
Sequences:
>Translated_180_residues MIIDETKTTSFQGICTVILRELRVERGMRQAILADQCGESPSEWEKREAGKGKLNFETLLRACRALNVLPSELMQCAERY RWALDQRGWSVVLSEIGGDDTLLDLAPKYWTSPGYRLWTSGMWVGLPIFKTTWWMDNVTVPGWYGLAAVFEFADNERYRE SQLDEERNRPFVGPVDPESF >Mature_180_residues MIIDETKTTSFQGICTVILRELRVERGMRQAILADQCGESPSEWEKREAGKGKLNFETLLRACRALNVLPSELMQCAERY RWALDQRGWSVVLSEIGGDDTLLDLAPKYWTSPGYRLWTSGMWVGLPIFKTTWWMDNVTVPGWYGLAAVFEFADNERYRE SQLDEERNRPFVGPVDPESF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20763; Mature: 20763
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDETKTTSFQGICTVILRELRVERGMRQAILADQCGESPSEWEKREAGKGKLNFETLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH RACRALNVLPSELMQCAERYRWALDQRGWSVVLSEIGGDDTLLDLAPKYWTSPGYRLWTS HHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCHHHHCCCCCEEECC GMWVGLPIFKTTWWMDNVTVPGWYGLAAVFEFADNERYRESQLDEERNRPFVGPVDPESF CCEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIIDETKTTSFQGICTVILRELRVERGMRQAILADQCGESPSEWEKREAGKGKLNFETLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH RACRALNVLPSELMQCAERYRWALDQRGWSVVLSEIGGDDTLLDLAPKYWTSPGYRLWTS HHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCHHHHCCCCCEEECC GMWVGLPIFKTTWWMDNVTVPGWYGLAAVFEFADNERYRESQLDEERNRPFVGPVDPESF CCEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA