Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027914

Identifier: 238027914

GI number: 238027914

Start: 2587942

End: 2588568

Strand: Reverse

Name: 238027914

Synonym: bglu_1g23560

Alternate gene names: NA

Gene position: 2588568-2587942 (Counterclockwise)

Preceding gene: 238027915

Following gene: 238027908

Centisome position: 66.26

GC content: 42.9

Gene sequence:

>627_bases
ATGTATATCAGCAGGAAAGACGCAGGGGAATTGATTTTTCAGCATCGTCAGGATGCTATTGCGGACGTTCGTGGGGAGGC
TGATTTTCTTCTTGCCTTACTTGATGGTGATGATTGGTCACTTGTCATAAAATCGCATGCTCTTATTGAGTCGCTTGTTA
CCGAGTTGATTGTTTCAAAGATCGATCAGCCGACTATGAAGTCTTTCATCGAGAGGTTGCCGCTTTCTGATAATGAAATA
GGGAAAATTCGAATAGCAAAGGATTATGGCATCCTCAGTGCTGGGCAACGATCATTTCTGAAGAATTTTTCCGAGCTACG
TAATAGGCTGGTTCACAGGGTCGAAAATATAAACTTCAAATTTTTGGAGTATGTTGCAAATCTAGATAAGAATCAGAAAA
AATCGTGGCAGGAAGCCTATACATGGTTTGAGCGGGAGGGCGATGAAGGTAAGGAGTCGGTGTGGAGTGCTGCCGCCATT
GACAACCCGCGATGGGCAGTATTTATGTCAGTCTTCATGTTCGTCATTTTTAATCGCCTTAGCATATCTGAATTTGATGG
CGTGAGGAAACTTGAGTTGGCGTCCAAGGAAACAATGAAACGACTATTTGGTGGTGACTCTAAATAA

Upstream 100 bases:

>100_bases
ACAAAGCAAAAGCTTATCGTGAAGTTGAAGCGTGAGCGTCATCAAGAGGCTGCTGAGAAGCGTAAGATGGAAGGCATTAA
ATAAAAATTGTGGGGTCACT

Downstream 100 bases:

>100_bases
GTCGATCTAATGTTCCTTAAGGCGGGCGATTCAGATTTTCCTCTTCGAGGTGCTTGCCTCATGCTGGGGAAGCGCTTCGC
TGAGGTGCTGATGTAGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MYISRKDAGELIFQHRQDAIADVRGEADFLLALLDGDDWSLVIKSHALIESLVTELIVSKIDQPTMKSFIERLPLSDNEI
GKIRIAKDYGILSAGQRSFLKNFSELRNRLVHRVENINFKFLEYVANLDKNQKKSWQEAYTWFEREGDEGKESVWSAAAI
DNPRWAVFMSVFMFVIFNRLSISEFDGVRKLELASKETMKRLFGGDSK

Sequences:

>Translated_208_residues
MYISRKDAGELIFQHRQDAIADVRGEADFLLALLDGDDWSLVIKSHALIESLVTELIVSKIDQPTMKSFIERLPLSDNEI
GKIRIAKDYGILSAGQRSFLKNFSELRNRLVHRVENINFKFLEYVANLDKNQKKSWQEAYTWFEREGDEGKESVWSAAAI
DNPRWAVFMSVFMFVIFNRLSISEFDGVRKLELASKETMKRLFGGDSK
>Mature_208_residues
MYISRKDAGELIFQHRQDAIADVRGEADFLLALLDGDDWSLVIKSHALIESLVTELIVSKIDQPTMKSFIERLPLSDNEI
GKIRIAKDYGILSAGQRSFLKNFSELRNRLVHRVENINFKFLEYVANLDKNQKKSWQEAYTWFEREGDEGKESVWSAAAI
DNPRWAVFMSVFMFVIFNRLSISEFDGVRKLELASKETMKRLFGGDSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24018; Mature: 24018

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYISRKDAGELIFQHRQDAIADVRGEADFLLALLDGDDWSLVIKSHALIESLVTELIVSK
CCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHH
IDQPTMKSFIERLPLSDNEIGKIRIAKDYGILSAGQRSFLKNFSELRNRLVHRVENINFK
CCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FLEYVANLDKNQKKSWQEAYTWFEREGDEGKESVWSAAAIDNPRWAVFMSVFMFVIFNRL
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
SISEFDGVRKLELASKETMKRLFGGDSK
CHHHHCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYISRKDAGELIFQHRQDAIADVRGEADFLLALLDGDDWSLVIKSHALIESLVTELIVSK
CCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHH
IDQPTMKSFIERLPLSDNEIGKIRIAKDYGILSAGQRSFLKNFSELRNRLVHRVENINFK
CCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FLEYVANLDKNQKKSWQEAYTWFEREGDEGKESVWSAAAIDNPRWAVFMSVFMFVIFNRL
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
SISEFDGVRKLELASKETMKRLFGGDSK
CHHHHCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA