| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027887
Identifier: 238027887
GI number: 238027887
Start: 2555097
End: 2555675
Strand: Direct
Name: 238027887
Synonym: bglu_1g23220
Alternate gene names: NA
Gene position: 2555097-2555675 (Clockwise)
Preceding gene: 238027877
Following gene: 238027888
Centisome position: 65.41
GC content: 56.48
Gene sequence:
>579_bases ATGGCGACGCCATCCAAATTCGATAACGACACCTTCCCGCTCACGCGGGCACACATGGACGCGTTCGTTCGGCGCACCGC CGACCGGCTCACGGAATGCACCGGCAAACTGCTTGAAGTGGGCCCGCAGGACCGCTCGCTCGTGCGCCAGTGTTTCACGA ATTTCAGCGTGGACACATTCGACGTGGTCGGCACCTACAAGCCAACGATCATTGGCGATATCACCAAAGTCAATGCTGCC ATCCCGGATAGCGCATACGACGTGGTGGTGTGCATGGACGTGATCGAACACACGCTGAACCCGTTCGACACGATCAAGGA AATCCGCCGCATTCTGAAACATGAAGGCCATCTGATGATTTCCGCGCCGTTGAACTGGCGCATTCACGGCCCTTCGCCGG ATTGCTGGCGCATTACCGAACACGGCTGGAACGTGCTGCTGCGTGACTTCGACATCGTGGAGATCGACATTCTGGAGTCG CCGGAGCGTGAGCTCTTTCCGTTGAAATACAACGTGCTCGCGAAGTGCAACAAGTTCAAGAACACACCAGACAACGAACT GACATTCCGTTTCATCTGA
Upstream 100 bases:
>100_bases GAGCAGTGCCTCGGACTGCGTCCGCACAACGGTCAATACTGGACCGTCTAGACCAACCGGCACTGTCAATTGAAACCAGC ACTCCTGCGAGAATTCCCCC
Downstream 100 bases:
>100_bases TCAAGCATATGAAAAATACTTTGGCATCGGTCGAAGCGGCCATCGAACAGATCGATTCGCAGATTTTCAATTTGAACGTT TTCAAAGAGACCGGCGTGTT
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MATPSKFDNDTFPLTRAHMDAFVRRTADRLTECTGKLLEVGPQDRSLVRQCFTNFSVDTFDVVGTYKPTIIGDITKVNAA IPDSAYDVVVCMDVIEHTLNPFDTIKEIRRILKHEGHLMISAPLNWRIHGPSPDCWRITEHGWNVLLRDFDIVEIDILES PERELFPLKYNVLAKCNKFKNTPDNELTFRFI
Sequences:
>Translated_192_residues MATPSKFDNDTFPLTRAHMDAFVRRTADRLTECTGKLLEVGPQDRSLVRQCFTNFSVDTFDVVGTYKPTIIGDITKVNAA IPDSAYDVVVCMDVIEHTLNPFDTIKEIRRILKHEGHLMISAPLNWRIHGPSPDCWRITEHGWNVLLRDFDIVEIDILES PERELFPLKYNVLAKCNKFKNTPDNELTFRFI >Mature_191_residues ATPSKFDNDTFPLTRAHMDAFVRRTADRLTECTGKLLEVGPQDRSLVRQCFTNFSVDTFDVVGTYKPTIIGDITKVNAAI PDSAYDVVVCMDVIEHTLNPFDTIKEIRRILKHEGHLMISAPLNWRIHGPSPDCWRITEHGWNVLLRDFDIVEIDILESP ERELFPLKYNVLAKCNKFKNTPDNELTFRFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22110; Mature: 21978
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPSKFDNDTFPLTRAHMDAFVRRTADRLTECTGKLLEVGPQDRSLVRQCFTNFSVDTF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCE DVVGTYKPTIIGDITKVNAAIPDSAYDVVVCMDVIEHTLNPFDTIKEIRRILKHEGHLMI EECCCCCCCEEECHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEE SAPLNWRIHGPSPDCWRITEHGWNVLLRDFDIVEIDILESPERELFPLKYNVLAKCNKFK ECCCEEEEECCCCCCEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC NTPDNELTFRFI CCCCCCEEEEEC >Mature Secondary Structure ATPSKFDNDTFPLTRAHMDAFVRRTADRLTECTGKLLEVGPQDRSLVRQCFTNFSVDTF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCE DVVGTYKPTIIGDITKVNAAIPDSAYDVVVCMDVIEHTLNPFDTIKEIRRILKHEGHLMI EECCCCCCCEEECHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEE SAPLNWRIHGPSPDCWRITEHGWNVLLRDFDIVEIDILESPERELFPLKYNVLAKCNKFK ECCCEEEEECCCCCCEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC NTPDNELTFRFI CCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA